RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
TMEM260-213ENST00000556929 GTF3C3Q9Y5Q9 886 aa12.07□□□□□ -0.48
TMEM260-213ENST00000556929 A0A1B0GUL6 1792 aa12.06□□□□□ -0.48
TMEM260-213ENST00000556929 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
TMEM260-213ENST00000556929 BBOX1O75936 387 aa12.06□□□□□ -0.48
TMEM260-213ENST00000556929 CHRNA5P30532 468 aa12.06□□□□□ -0.48
TMEM260-213ENST00000556929 RPS8P62241 208 aaKnown RBP12.06□□□□□ -0.48
TMEM260-213ENST00000556929 PTPN12Q05209 780 aaKnown RBP12.06□□□□□ -0.48
TMEM260-213ENST00000556929 TMC4Q7Z404 712 aa12.06□□□□□ -0.48
TMEM260-213ENST00000556929 CNKSR1Q969H4 720 aa12.06□□□□□ -0.48
TMEM260-213ENST00000556929 GCC1Q96CN9 775 aa12.06□□□□□ -0.48
TMEM260-213ENST00000556929 ZNF594Q96JF6 807 aaPredicted RBP12.06□□□□□ -0.48
TMEM260-213ENST00000556929 CNNM1Q9NRU3 951 aa12.06□□□□□ -0.48
TMEM260-213ENST00000556929 OS9Q13438 667 aaPredicted RBP12.05□□□□□ -0.48
TMEM260-213ENST00000556929 LDHAL6AQ6ZMR3 332 aa12.05□□□□□ -0.48
TMEM260-213ENST00000556929 ERC1Q8IUD2 1116 aa12.05□□□□□ -0.48
TMEM260-213ENST00000556929 KLHDC4Q8TBB5 520 aa12.05□□□□□ -0.48
TMEM260-213ENST00000556929 CELF1Q92879 486 aaKnown RBP12.05□□□□□ -0.48
TMEM260-213ENST00000556929 TMX4Q9H1E5 349 aaPredicted RBP12.05□□□□□ -0.48
TMEM260-213ENST00000556929 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
TMEM260-213ENST00000556929 PA2G4Q9UQ80 394 aaKnown RBP12.05□□□□□ -0.48
TMEM260-213ENST00000556929 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
TMEM260-213ENST00000556929 LRRC37AA6NMS7 1700 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 EYA2O00167 538 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 RAB11FIP3O75154 756 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 CIAO1O76071 339 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 DPEP1P16444 411 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 IL15P40933 162 aaPredicted RBP12.04□□□□□ -0.48
TMEM260-213ENST00000556929 TTLL6Q8N841 843 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 SIL1Q9H173 461 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
TMEM260-213ENST00000556929 PIM2Q9P1W9 311 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
TMEM260-213ENST00000556929 SLX4Q8IY92 1834 aa12.04□□□□□ -0.48
TMEM260-213ENST00000556929 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
TMEM260-213ENST00000556929 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
TMEM260-213ENST00000556929 IGHDP01880 384 aa12.03□□□□□ -0.48
TMEM260-213ENST00000556929 B4GALNT3Q6L9W6 998 aa12.03□□□□□ -0.48
TMEM260-213ENST00000556929 CENPQQ7L2Z9 268 aaPredicted RBP12.03□□□□□ -0.48
TMEM260-213ENST00000556929 FHDC1Q9C0D6 1143 aaPredicted RBP12.03□□□□□ -0.48
TMEM260-213ENST00000556929 EXOC6BQ9Y2D4 811 aa12.03□□□□□ -0.48
TMEM260-213ENST00000556929 MROH5Q6ZUA9 1318 aa12.03□□□□□ -0.48
TMEM260-213ENST00000556929 COL4A1P02462 1669 aa12.03□□□□□ -0.48
TMEM260-213ENST00000556929 KCNA3P22001 575 aa12.02□□□□□ -0.49
TMEM260-213ENST00000556929 LRRC24Q50LG9 513 aa12.02□□□□□ -0.49
TMEM260-213ENST00000556929 SP8Q8IXZ3 490 aa12.02□□□□□ -0.49
TMEM260-213ENST00000556929 SMC5Q8IY18 1101 aa12.02□□□□□ -0.49
TMEM260-213ENST00000556929 KIF1BPQ96EK5 621 aa12.02□□□□□ -0.49
TMEM260-213ENST00000556929 PUS3Q9BZE2 481 aaKnown RBP12.02□□□□□ -0.49
TMEM260-213ENST00000556929 ANKRD2Q9GZV1 360 aa12.02□□□□□ -0.49
TMEM260-213ENST00000556929 DALRD3Q5D0E6 543 aaKnown RBP12.01□□□□□ -0.49
TMEM260-213ENST00000556929 METTL24Q5JXM2 366 aa12.01□□□□□ -0.49
TMEM260-213ENST00000556929 PRPF40BQ6NWY9 871 aaKnown RBP12.01□□□□□ -0.49
TMEM260-213ENST00000556929 ATG9AQ7Z3C6 839 aa12.01□□□□□ -0.49
TMEM260-213ENST00000556929 RHPN1Q8TCX5 695 aa12.01□□□□□ -0.49
TMEM260-213ENST00000556929 SYT17Q9BSW7 474 aa12.01□□□□□ -0.49
TMEM260-213ENST00000556929 LRRCC1Q9C099 1032 aa12.01□□□□□ -0.49
TMEM260-213ENST00000556929 CEP126Q9P2H0 1117 aa12.01□□□□□ -0.49
TMEM260-213ENST00000556929 ATP6V0A2Q9Y487 856 aa12.01□□□□□ -0.49
TMEM260-213ENST00000556929 RIPOR2Q9Y4F9 1068 aa12.01□□□□□ -0.49
TMEM260-213ENST00000556929 APBB1O00213 710 aa12□□□□□ -0.49
TMEM260-213ENST00000556929 SASH1O94885 1247 aa12□□□□□ -0.49
TMEM260-213ENST00000556929 CHRNDQ07001 517 aa12□□□□□ -0.49
TMEM260-213ENST00000556929 GRIPAP1Q4V328 841 aa12□□□□□ -0.49
TMEM260-213ENST00000556929 CC2D2BQ6DHV5 1058 aa12□□□□□ -0.49
TMEM260-213ENST00000556929 NLGN2Q8NFZ4 835 aa12□□□□□ -0.49
TMEM260-213ENST00000556929 MINPP1Q9UNW1 487 aa12□□□□□ -0.49
TMEM260-213ENST00000556929 AKAP2Q9Y2D5 859 aa12□□□□□ -0.49
TMEM260-213ENST00000556929 PDE8BO95263 885 aa11.99□□□□□ -0.49
TMEM260-213ENST00000556929 TFCP2Q12800 502 aa11.99□□□□□ -0.49
TMEM260-213ENST00000556929 SOGA3Q5TF21 947 aa11.99□□□□□ -0.49
TMEM260-213ENST00000556929 ANKRD45Q5TZF3 282 aa11.99□□□□□ -0.49
TMEM260-213ENST00000556929 CLASRPQ8N2M8 674 aaKnown RBP11.99□□□□□ -0.49
TMEM260-213ENST00000556929 GPR108Q9NPR9 543 aa11.99□□□□□ -0.49
TMEM260-213ENST00000556929 ANKIB1Q9P2G1 1089 aa11.99□□□□□ -0.49
TMEM260-213ENST00000556929 XDHP47989 1333 aa11.99□□□□□ -0.49
TMEM260-213ENST00000556929 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
TMEM260-213ENST00000556929 ARAP2Q8WZ64 1704 aa11.99□□□□□ -0.49
TMEM260-213ENST00000556929 KCNJ4P48050 445 aa11.98□□□□□ -0.49
TMEM260-213ENST00000556929 MPNDQ8N594 471 aa11.98□□□□□ -0.49
TMEM260-213ENST00000556929 HELBQ8NG08 1087 aaPredicted RBP11.98□□□□□ -0.49
TMEM260-213ENST00000556929 NSFL1CQ9UNZ2 370 aaKnown RBP11.98□□□□□ -0.49
TMEM260-213ENST00000556929 BCS1LQ9Y276 419 aa11.98□□□□□ -0.49
TMEM260-213ENST00000556929 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
TMEM260-213ENST00000556929 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
TMEM260-213ENST00000556929 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
TMEM260-213ENST00000556929 C21orf2O43822 256 aa11.97□□□□□ -0.49
TMEM260-213ENST00000556929 TAF5LO75529 589 aa11.97□□□□□ -0.49
TMEM260-213ENST00000556929 ATP2B4P23634 1241 aa11.97□□□□□ -0.49
TMEM260-213ENST00000556929 UBE4AQ14139 1066 aa11.97□□□□□ -0.49
TMEM260-213ENST00000556929 PUM3Q15397 648 aaKnown RBP11.97□□□□□ -0.49
TMEM260-213ENST00000556929 CCDC93Q567U6 631 aa11.97□□□□□ -0.49
TMEM260-213ENST00000556929 IL1RAPL2Q9NP60 686 aa11.97□□□□□ -0.49
TMEM260-213ENST00000556929 PODXL2Q9NZ53 605 aa11.97□□□□□ -0.49
TMEM260-213ENST00000556929 MYH13Q9UKX3 1938 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 ZNF804BA4D1E1 1349 aa11.96□□□□□ -0.49
TMEM260-213ENST00000556929 SMARCA5O60264 1052 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-213ENST00000556929 IFIT1P09914 478 aaKnown RBP11.96□□□□□ -0.49
TMEM260-213ENST00000556929 SLC5A1P13866 664 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms