RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 GTF3C2Q8WUA4 911 aaPredicted RBP9.18□□□□□ -0.94
LINC00648-203ENST00000556923 NUDT16Q96DE0 195 aaKnown RBP9.18□□□□□ -0.94
LINC00648-203ENST00000556923 ADGRE1Q14246 886 aa9.17□□□□□ -0.94
LINC00648-203ENST00000556923 MBTPS1Q14703 1052 aa9.17□□□□□ -0.94
LINC00648-203ENST00000556923 PHLDB3Q6NSJ2 640 aa9.17□□□□□ -0.94
LINC00648-203ENST00000556923 LENG1Q96BZ8 264 aaPredicted RBP9.17□□□□□ -0.94
LINC00648-203ENST00000556923 TPSG1Q9NRR2 321 aa9.17□□□□□ -0.94
LINC00648-203ENST00000556923 MPSTP25325 297 aa9.16□□□□□ -0.94
LINC00648-203ENST00000556923 MTMR3Q13615 1198 aa9.16□□□□□ -0.94
LINC00648-203ENST00000556923 FBXO11Q86XK2 927 aa9.16□□□□□ -0.94
LINC00648-203ENST00000556923 EDEM1Q92611 657 aa9.16□□□□□ -0.94
LINC00648-203ENST00000556923 DEAF1O75398 565 aaPredicted RBP9.15□□□□□ -0.94
LINC00648-203ENST00000556923 TTC39BQ5VTQ0 682 aaPredicted RBP9.15□□□□□ -0.94
LINC00648-203ENST00000556923 GDF6Q6KF10 455 aaPredicted RBP9.15□□□□□ -0.94
LINC00648-203ENST00000556923 RBSNQ9H1K0 784 aa9.15□□□□□ -0.94
LINC00648-203ENST00000556923 ABI2Q9NYB9 513 aaPredicted RBP9.15□□□□□ -0.94
LINC00648-203ENST00000556923 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.94
LINC00648-203ENST00000556923 CYP2E1P05181 493 aaPredicted RBP9.14□□□□□ -0.95
LINC00648-203ENST00000556923 ITGB7P26010 798 aa9.14□□□□□ -0.95
LINC00648-203ENST00000556923 RSPO4Q2I0M5 234 aaPredicted RBP9.14□□□□□ -0.95
LINC00648-203ENST00000556923 NOM1Q5C9Z4 860 aaKnown RBP9.14□□□□□ -0.95
LINC00648-203ENST00000556923 PDE12Q6L8Q7 609 aaKnown RBP9.14□□□□□ -0.95
LINC00648-203ENST00000556923 ELP3Q9H9T3 547 aa9.14□□□□□ -0.95
LINC00648-203ENST00000556923 TRIM33Q9UPN9 1127 aa9.14□□□□□ -0.95
LINC00648-203ENST00000556923 EIF1AXP47813 144 aaKnown RBP9.13□□□□□ -0.95
LINC00648-203ENST00000556923 ATP11AP98196 1134 aa9.13□□□□□ -0.95
LINC00648-203ENST00000556923 NRG1Q02297 640 aaPredicted RBP9.13□□□□□ -0.95
LINC00648-203ENST00000556923 DNM1Q05193 864 aaKnown RBP9.13□□□□□ -0.95
LINC00648-203ENST00000556923 HYAL2Q12891 473 aa9.13□□□□□ -0.95
LINC00648-203ENST00000556923 NKAPLQ5M9Q1 402 aa9.13□□□□□ -0.95
LINC00648-203ENST00000556923 TXNRD3Q86VQ6 643 aa9.13□□□□□ -0.95
LINC00648-203ENST00000556923 IL22RA1Q8N6P7 574 aa9.13□□□□□ -0.95
LINC00648-203ENST00000556923 SEMA6BQ9H3T3 888 aa9.13□□□□□ -0.95
LINC00648-203ENST00000556923 USP21Q9UK80 565 aa9.13□□□□□ -0.95
LINC00648-203ENST00000556923 KIF4AO95239 1232 aa9.12□□□□□ -0.95
LINC00648-203ENST00000556923 PDGFAP04085 211 aa9.12□□□□□ -0.95
LINC00648-203ENST00000556923 ZNF438Q7Z4V0 828 aa9.12□□□□□ -0.95
LINC00648-203ENST00000556923 GGNBP2Q9H3C7 697 aa9.12□□□□□ -0.95
LINC00648-203ENST00000556923 A6NHS1 94 aa9.11□□□□□ -0.95
LINC00648-203ENST00000556923 CNTN3Q9P232 1028 aa9.11□□□□□ -0.95
LINC00648-203ENST00000556923 RPLP1P05386 114 aaKnown RBP9.1□□□□□ -0.95
LINC00648-203ENST00000556923 NPR3P17342 541 aa9.1□□□□□ -0.95
LINC00648-203ENST00000556923 MZF1P28698 734 aaPredicted RBP9.1□□□□□ -0.95
LINC00648-203ENST00000556923 SPACA7Q96KW9 195 aa9.1□□□□□ -0.95
LINC00648-203ENST00000556923 RASSF4Q9H2L5 321 aa9.1□□□□□ -0.95
LINC00648-203ENST00000556923 KANSL3Q9P2N6 904 aa9.1□□□□□ -0.95
LINC00648-203ENST00000556923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.1□□□□□ -0.95
LINC00648-203ENST00000556923 DLL1O00548 723 aa9.09□□□□□ -0.95
LINC00648-203ENST00000556923 IGF2-ASQ6U949 168 aa9.09□□□□□ -0.95
LINC00648-203ENST00000556923 XKR5Q6UX68 686 aa9.09□□□□□ -0.95
LINC00648-203ENST00000556923 ADAMTSL4Q6UY14 1074 aa9.09□□□□□ -0.95
LINC00648-203ENST00000556923 USTQ9Y2C2 406 aa9.09□□□□□ -0.95
LINC00648-203ENST00000556923 SUPT5HO00267 1087 aaKnown RBP9.08□□□□□ -0.96
LINC00648-203ENST00000556923 DYRK3O43781 588 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 PCSK2P16519 638 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 SETDB1Q15047 1291 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 C8orf34Q49A92 452 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 CEP135Q66GS9 1140 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 NCAPG2Q86XI2 1143 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 CEP120Q8N960 986 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 C1orf127Q8N9H9 656 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 ARID3AQ99856 593 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 SSBP4Q9BWG4 385 aaPredicted RBP9.08□□□□□ -0.96
LINC00648-203ENST00000556923 POLIQ9UNA4 740 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
LINC00648-203ENST00000556923 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC00648-203ENST00000556923 ZNF211Q13398 564 aaPredicted RBP9.07□□□□□ -0.96
LINC00648-203ENST00000556923 CACTIN-AS1Q8N1I8 211 aa9.07□□□□□ -0.96
LINC00648-203ENST00000556923 WFDC12Q8WWY7 111 aa9.07□□□□□ -0.96
LINC00648-203ENST00000556923 LACRTQ9GZZ8 138 aa9.07□□□□□ -0.96
LINC00648-203ENST00000556923 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
LINC00648-203ENST00000556923 PPME1Q9Y570 386 aa9.07□□□□□ -0.96
LINC00648-203ENST00000556923 FAM13AO94988 1023 aa9.06□□□□□ -0.96
LINC00648-203ENST00000556923 ABL1P00519 1130 aa9.06□□□□□ -0.96
LINC00648-203ENST00000556923 NOS3P29474 1203 aa9.06□□□□□ -0.96
LINC00648-203ENST00000556923 FKBP4Q02790 459 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC00648-203ENST00000556923 SF3B2Q13435 895 aaKnown RBP9.06□□□□□ -0.96
LINC00648-203ENST00000556923 PBX4Q9BYU1 374 aa9.06□□□□□ -0.96
LINC00648-203ENST00000556923 CHRDQ9H2X0 955 aa9.06□□□□□ -0.96
LINC00648-203ENST00000556923 SRA1Q9HD15 236 aaKnown RBP9.06□□□□□ -0.96
LINC00648-203ENST00000556923 SALL4Q9UJQ4 1053 aa9.06□□□□□ -0.96
LINC00648-203ENST00000556923 FZD6O60353 706 aa9.05□□□□□ -0.96
LINC00648-203ENST00000556923 ACPPP15309 386 aa9.05□□□□□ -0.96
LINC00648-203ENST00000556923 IREB2P48200 963 aaKnown RBP9.05□□□□□ -0.96
LINC00648-203ENST00000556923 AAMPQ13685 434 aa9.05□□□□□ -0.96
LINC00648-203ENST00000556923 TXNDC11Q6PKC3 985 aa9.05□□□□□ -0.96
LINC00648-203ENST00000556923 MAP4K3Q8IVH8 894 aa9.05□□□□□ -0.96
LINC00648-203ENST00000556923 MUC3BQ9H195 1237 aa9.05□□□□□ -0.96
LINC00648-203ENST00000556923 LINC01387J3KSC0 135 aa9.04□□□□□ -0.96
LINC00648-203ENST00000556923 CES1P23141 567 aa9.04□□□□□ -0.96
LINC00648-203ENST00000556923 CDC27P30260 824 aa9.04□□□□□ -0.96
LINC00648-203ENST00000556923 ERICH6Q7L0X2 663 aa9.04□□□□□ -0.96
LINC00648-203ENST00000556923 GALNT11Q8NCW6 608 aa9.04□□□□□ -0.96
LINC00648-203ENST00000556923 TTC16Q8NEE8 873 aa9.04□□□□□ -0.96
LINC00648-203ENST00000556923 TP53INP1Q96A56 240 aa9.04□□□□□ -0.96
LINC00648-203ENST00000556923 MEGF10Q96KG7 1140 aa9.03□□□□□ -0.96
LINC00648-203ENST00000556923 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
LINC00648-203ENST00000556923 MRPL18Q9H0U6 180 aaKnown RBP9.03□□□□□ -0.96
LINC00648-203ENST00000556923 SH2B1Q9NRF2 756 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms