RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 GNAI1P63096 354 aa23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 DOK7Q18PE1 504 aa23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 TBC1D10BQ4KMP7 808 aaPredicted RBP23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 USP48Q86UV5 1035 aa23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 MYD88Q99836 296 aa23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 KCNQ5Q9NR82 932 aa23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 TSKSQ9UJT2 592 aa23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 CASP8AP2Q9UKL3 1982 aa23.69■■□□□ 1.38
VIPAS39-209ENST00000556909 RPS12P25398 132 aaKnown RBP23.68■■□□□ 1.38
VIPAS39-209ENST00000556909 CALD1Q05682 793 aaKnown RBP23.68■■□□□ 1.38
VIPAS39-209ENST00000556909 SEC31BQ9NQW1 1179 aa23.68■■□□□ 1.38
VIPAS39-209ENST00000556909 DLK2Q6UY11 383 aa23.67■■□□□ 1.38
VIPAS39-209ENST00000556909 PODXL2Q9NZ53 605 aa23.67■■□□□ 1.38
VIPAS39-209ENST00000556909 HSP90B1P14625 803 aaKnown RBP23.66■■□□□ 1.38
VIPAS39-209ENST00000556909 BRPF1P55201 1214 aaPredicted RBP23.66■■□□□ 1.38
VIPAS39-209ENST00000556909 CCDC191Q8NCU4 936 aa23.66■■□□□ 1.38
VIPAS39-209ENST00000556909 CA12O43570 354 aa23.65■■□□□ 1.38
VIPAS39-209ENST00000556909 UFL1O94874 794 aa23.65■■□□□ 1.38
VIPAS39-209ENST00000556909 PCCAP05165 728 aaPredicted RBP23.65■■□□□ 1.38
VIPAS39-209ENST00000556909 CCDC152Q4G0S7 254 aa23.65■■□□□ 1.38
VIPAS39-209ENST00000556909 KRT26Q7Z3Y9 468 aa23.65■■□□□ 1.38
VIPAS39-209ENST00000556909 C8orf58Q8NAV2 365 aa23.65■■□□□ 1.38
VIPAS39-209ENST00000556909 HUNKP57058 714 aa23.64■■□□□ 1.37
VIPAS39-209ENST00000556909 ZC3H12CQ9C0D7 883 aaKnown RBP23.64■■□□□ 1.37
VIPAS39-209ENST00000556909 CWC25Q9NXE8 425 aaPredicted RBP23.64■■□□□ 1.37
VIPAS39-209ENST00000556909 ZNF609O15014 1411 aa23.64■■□□□ 1.37
VIPAS39-209ENST00000556909 ADM5C9JUS6 153 aa23.63■■□□□ 1.37
VIPAS39-209ENST00000556909 PDE8AO60658 829 aa23.63■■□□□ 1.37
VIPAS39-209ENST00000556909 VIL1P09327 827 aaKnown RBP23.63■■□□□ 1.37
VIPAS39-209ENST00000556909 RBM26Q5T8P6 1007 aaKnown RBP23.63■■□□□ 1.37
VIPAS39-209ENST00000556909 JARID2Q92833 1246 aaPredicted RBP23.63■■□□□ 1.37
VIPAS39-209ENST00000556909 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
VIPAS39-209ENST00000556909 ANKIB1Q9P2G1 1089 aa23.63■■□□□ 1.37
VIPAS39-209ENST00000556909 GGA1Q9UJY5 639 aa23.63■■□□□ 1.37
VIPAS39-209ENST00000556909 ZNF646O15015 1829 aaPredicted RBP23.62■■□□□ 1.37
VIPAS39-209ENST00000556909 KIF4BQ2VIQ3 1234 aa23.62■■□□□ 1.37
VIPAS39-209ENST00000556909 CCDC85AQ96PX6 553 aaPredicted RBP23.62■■□□□ 1.37
VIPAS39-209ENST00000556909 DDX58O95786 925 aaKnown RBP23.61■■□□□ 1.37
VIPAS39-209ENST00000556909 NOGQ13253 232 aa23.61■■□□□ 1.37
VIPAS39-209ENST00000556909 CCDC30Q5VVM6 783 aa23.61■■□□□ 1.37
VIPAS39-209ENST00000556909 DCPSQ96C86 337 aaKnown RBP23.61■■□□□ 1.37
VIPAS39-209ENST00000556909 ZIC5Q96T25 663 aa23.61■■□□□ 1.37
VIPAS39-209ENST00000556909 GBA2Q9HCG7 927 aaPredicted RBP23.6■■□□□ 1.37
VIPAS39-209ENST00000556909 GGA3Q9NZ52 723 aa23.6■■□□□ 1.37
VIPAS39-209ENST00000556909 AKAP11Q9UKA4 1901 aa23.59■■□□□ 1.37
VIPAS39-209ENST00000556909 G3V3G9 751 aa23.59■■□□□ 1.37
VIPAS39-209ENST00000556909 DCAF8Q5TAQ9 597 aa23.59■■□□□ 1.37
VIPAS39-209ENST00000556909 TSPYL6Q8N831 410 aa23.59■■□□□ 1.37
VIPAS39-209ENST00000556909 MAP3K2Q9Y2U5 619 aa23.59■■□□□ 1.37
VIPAS39-209ENST00000556909 ASTN2O75129 1339 aaPredicted RBP23.59■■□□□ 1.37
VIPAS39-209ENST00000556909 XDHP47989 1333 aa23.59■■□□□ 1.37
VIPAS39-209ENST00000556909 RGMBQ6NW40 437 aa23.58■■□□□ 1.37
VIPAS39-209ENST00000556909 ANKRD18AQ8IVF6 992 aa23.58■■□□□ 1.37
VIPAS39-209ENST00000556909 CHMP4AQ9BY43 222 aa23.58■■□□□ 1.37
VIPAS39-209ENST00000556909 FAM155AB1AL88 458 aaPredicted RBP23.57■■□□□ 1.36
VIPAS39-209ENST00000556909 CTSWP56202 376 aa23.57■■□□□ 1.36
VIPAS39-209ENST00000556909 ZNF280AP59817 542 aaPredicted RBP23.57■■□□□ 1.36
VIPAS39-209ENST00000556909 RSBN1LQ6PCB5 846 aaPredicted RBP23.57■■□□□ 1.36
VIPAS39-209ENST00000556909 C2orf69Q8N8R5 385 aa23.57■■□□□ 1.36
VIPAS39-209ENST00000556909 IGKV5-2P06315 115 aa23.56■■□□□ 1.36
VIPAS39-209ENST00000556909 SULF1Q8IWU6 871 aa23.56■■□□□ 1.36
VIPAS39-209ENST00000556909 AGBL3Q8NEM8 1001 aa23.56■■□□□ 1.36
VIPAS39-209ENST00000556909 TSR2Q969E8 191 aaKnown RBP23.56■■□□□ 1.36
VIPAS39-209ENST00000556909 PI4KAP2A4QPH2 592 aa23.55■■□□□ 1.36
VIPAS39-209ENST00000556909 CCDC85CA6NKD9 419 aa23.55■■□□□ 1.36
VIPAS39-209ENST00000556909 KSR2Q6VAB6 950 aa23.55■■□□□ 1.36
VIPAS39-209ENST00000556909 PI4KAP1Q8N8J0 262 aa23.55■■□□□ 1.36
VIPAS39-209ENST00000556909 PAPPA2Q9BXP8 1791 aa23.55■■□□□ 1.36
VIPAS39-209ENST00000556909 ATP2B4P23634 1241 aa23.54■■□□□ 1.36
VIPAS39-209ENST00000556909 FAM161AQ3B820 660 aa23.54■■□□□ 1.36
VIPAS39-209ENST00000556909 CDCA5Q96FF9 252 aa23.54■■□□□ 1.36
VIPAS39-209ENST00000556909 CDC5LQ99459 802 aaKnown RBP23.54■■□□□ 1.36
VIPAS39-209ENST00000556909 MCOLN1Q9GZU1 580 aa23.54■■□□□ 1.36
VIPAS39-209ENST00000556909 CACNA1FO60840 1977 aa23.54■■□□□ 1.36
VIPAS39-209ENST00000556909 TTLL11Q8NHH1 800 aa23.53■■□□□ 1.36
VIPAS39-209ENST00000556909 GMLQ99445 158 aa23.53■■□□□ 1.36
VIPAS39-209ENST00000556909 GREM2Q9H772 168 aa23.53■■□□□ 1.36
VIPAS39-209ENST00000556909 MED23Q9ULK4 1368 aa23.52■■□□□ 1.36
VIPAS39-209ENST00000556909 ZNF157P51786 506 aaPredicted RBP23.52■■□□□ 1.36
VIPAS39-209ENST00000556909 SCARF1Q14162 830 aa23.52■■□□□ 1.36
VIPAS39-209ENST00000556909 ANGEL2Q5VTE6 544 aaKnown RBP23.52■■□□□ 1.36
VIPAS39-209ENST00000556909 CCDC102AQ96A19 550 aa23.52■■□□□ 1.36
VIPAS39-209ENST00000556909 STK31Q9BXU1 1019 aa23.52■■□□□ 1.36
VIPAS39-209ENST00000556909 WTIPA6NIX2 430 aaPredicted RBP23.51■■□□□ 1.35
VIPAS39-209ENST00000556909 NEXNQ0ZGT2 675 aa23.51■■□□□ 1.35
VIPAS39-209ENST00000556909 CWF19L2Q2TBE0 894 aaKnown RBP23.51■■□□□ 1.35
VIPAS39-209ENST00000556909 PODNQ7Z5L7 613 aa23.51■■□□□ 1.35
VIPAS39-209ENST00000556909 MYOZ2Q9NPC6 264 aa23.51■■□□□ 1.35
VIPAS39-209ENST00000556909 USP17L3A6NCW0 530 aa23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 USP17L4A6NCW7 530 aa23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 NEURL1BA8MQ27 555 aa23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 SLC10A3P09131 477 aa23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 USP17L8P0C7I0 530 aa23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 KIF23Q02241 960 aaPredicted RBP23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 CCDC184Q52MB2 194 aa23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 USP17L1Q7RTZ2 530 aa23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 BSDC1Q9NW68 430 aaPredicted RBP23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 SAGE1Q9NXZ1 904 aa23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 MINPP1Q9UNW1 487 aa23.5■■□□□ 1.35
VIPAS39-209ENST00000556909 DGKZQ13574 1117 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms