RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 PSME1Q06323 249 aa7.76□□□□□ -1.17
PRPF39-211ENST00000556782 CLN3Q13286 438 aa7.76□□□□□ -1.17
PRPF39-211ENST00000556782 C1orf229Q6ZS94 237 aaPredicted RBP7.76□□□□□ -1.17
PRPF39-211ENST00000556782 GOLGA6L1Q8N7Z2 621 aa7.76□□□□□ -1.17
PRPF39-211ENST00000556782 PMFBP1Q8TBY8 1022 aa7.76□□□□□ -1.17
PRPF39-211ENST00000556782 GJD4Q96KN9 370 aaPredicted RBP7.76□□□□□ -1.17
PRPF39-211ENST00000556782 KRTAP9-2Q9BYQ4 174 aa7.76□□□□□ -1.17
PRPF39-211ENST00000556782 QTRT2Q9H974 415 aaKnown RBP7.76□□□□□ -1.17
PRPF39-211ENST00000556782 USP21Q9UK80 565 aa7.76□□□□□ -1.17
PRPF39-211ENST00000556782 ATRNO75882 1429 aa7.76□□□□□ -1.17
PRPF39-211ENST00000556782 BCL9LQ86UU0 1499 aa7.75□□□□□ -1.17
PRPF39-211ENST00000556782 ARHGEF10O15013 1369 aa7.75□□□□□ -1.17
PRPF39-211ENST00000556782 AMPD1P23109 780 aa7.75□□□□□ -1.17
PRPF39-211ENST00000556782 ERVK-9P63128 1117 aa7.75□□□□□ -1.17
PRPF39-211ENST00000556782 ITSN1Q15811 1721 aa7.75□□□□□ -1.17
PRPF39-211ENST00000556782 SLIT2O94813 1529 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 TOPAZ1Q8N9V7 1692 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 ALS2Q96Q42 1657 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 NBPF1Q3BBV0 1214 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 LINC00114Q6XXX2 140 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 CYP2U1Q7Z449 544 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 BANK1Q8NDB2 785 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 IL27Q8NEV9 243 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 L3MBTL2Q969R5 705 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 SIN3AQ96ST3 1273 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 TRPC5Q9UL62 973 aaPredicted RBP7.74□□□□□ -1.17
PRPF39-211ENST00000556782 PCDHB9Q9Y5E1 797 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.74□□□□□ -1.17
PRPF39-211ENST00000556782 TRPM1Q7Z4N2 1603 aa7.74□□□□□ -1.17
PRPF39-211ENST00000556782 GPRASP1Q5JY77 1395 aa7.73□□□□□ -1.17
PRPF39-211ENST00000556782 C1QTNF9BB2RNN3 333 aa7.73□□□□□ -1.17
PRPF39-211ENST00000556782 RNF20Q5VTR2 975 aa7.73□□□□□ -1.17
PRPF39-211ENST00000556782 SUV39H2Q9H5I1 410 aa7.73□□□□□ -1.17
PRPF39-211ENST00000556782 PLCH1Q4KWH8 1693 aa7.73□□□□□ -1.17
PRPF39-211ENST00000556782 KRTAP9-6A0A140TA67 174 aa7.72□□□□□ -1.17
PRPF39-211ENST00000556782 GNB5O14775 395 aa7.72□□□□□ -1.17
PRPF39-211ENST00000556782 NGDNQ8NEJ9 315 aaKnown RBP7.72□□□□□ -1.17
PRPF39-211ENST00000556782 NUDT16Q96DE0 195 aaKnown RBP7.72□□□□□ -1.17
PRPF39-211ENST00000556782 CDK19Q9BWU1 502 aa7.72□□□□□ -1.17
PRPF39-211ENST00000556782 GPAMQ9HCL2 828 aa7.72□□□□□ -1.17
PRPF39-211ENST00000556782 QRICH2Q9H0J4 1663 aa7.72□□□□□ -1.17
PRPF39-211ENST00000556782 CENPJQ9HC77 1338 aaPredicted RBP7.72□□□□□ -1.17
PRPF39-211ENST00000556782 CRYBG1Q9Y4K1 1723 aa7.72□□□□□ -1.17
PRPF39-211ENST00000556782 POLR3AO14802 1390 aaPredicted RBP7.71□□□□□ -1.17
PRPF39-211ENST00000556782 GLI3P10071 1580 aa7.71□□□□□ -1.17
PRPF39-211ENST00000556782 RALGAPBQ86X10 1494 aa7.71□□□□□ -1.18
PRPF39-211ENST00000556782 ZBBXA8MT70 800 aa7.71□□□□□ -1.18
PRPF39-211ENST00000556782 THBS1P07996 1170 aa7.71□□□□□ -1.18
PRPF39-211ENST00000556782 NEUROD1Q13562 356 aa7.71□□□□□ -1.18
PRPF39-211ENST00000556782 CD163Q86VB7 1156 aa7.71□□□□□ -1.18
PRPF39-211ENST00000556782 UNC5CLQ8IV45 518 aa7.71□□□□□ -1.18
PRPF39-211ENST00000556782 ARHGEF10LQ9HCE6 1279 aa7.71□□□□□ -1.18
PRPF39-211ENST00000556782 NWD2Q9ULI1 1742 aa7.71□□□□□ -1.18
PRPF39-211ENST00000556782 EP400Q96L91 3159 aa7.7□□□□□ -1.18
PRPF39-211ENST00000556782 A0A1B0GTH6 734 aa7.7□□□□□ -1.18
PRPF39-211ENST00000556782 BMP4P12644 408 aa7.7□□□□□ -1.18
PRPF39-211ENST00000556782 LBRQ14739 615 aaKnown RBP7.7□□□□□ -1.18
PRPF39-211ENST00000556782 NOP53Q9NZM5 478 aaKnown RBP7.7□□□□□ -1.18
PRPF39-211ENST00000556782 PHRF1Q9P1Y6 1649 aaKnown RBP7.7□□□□□ -1.18
PRPF39-211ENST00000556782 ROCK2O75116 1388 aaKnown RBP7.7□□□□□ -1.18
PRPF39-211ENST00000556782 ATAD2Q6PL18 1390 aa7.7□□□□□ -1.18
PRPF39-211ENST00000556782 NRAPQ86VF7 1730 aa7.69□□□□□ -1.18
PRPF39-211ENST00000556782 COL14A1Q05707 1796 aaKnown RBP7.69□□□□□ -1.18
PRPF39-211ENST00000556782 GPR37L1O60883 481 aa7.69□□□□□ -1.18
PRPF39-211ENST00000556782 CSB-PGBD3P0DP91 1061 aa7.69□□□□□ -1.18
PRPF39-211ENST00000556782 HOXB4P17483 251 aaPredicted RBP7.69□□□□□ -1.18
PRPF39-211ENST00000556782 TRIM26Q12899 539 aaPredicted RBP7.69□□□□□ -1.18
PRPF39-211ENST00000556782 SLCO4C1Q6ZQN7 724 aa7.69□□□□□ -1.18
PRPF39-211ENST00000556782 PGBD3Q8N328 593 aa7.69□□□□□ -1.18
PRPF39-211ENST00000556782 SEMA6BQ9H3T3 888 aa7.69□□□□□ -1.18
PRPF39-211ENST00000556782 ATXN7L1Q9ULK2 861 aaPredicted RBP7.69□□□□□ -1.18
PRPF39-211ENST00000556782 ACEP12821 1306 aa7.69□□□□□ -1.18
PRPF39-211ENST00000556782 PPIP5K1Q6PFW1 1433 aa7.69□□□□□ -1.18
PRPF39-211ENST00000556782 FAM83GA6ND36 823 aa7.68□□□□□ -1.18
PRPF39-211ENST00000556782 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
PRPF39-211ENST00000556782 PHKA2P46019 1235 aa7.68□□□□□ -1.18
PRPF39-211ENST00000556782 SCTRP47872 440 aa7.68□□□□□ -1.18
PRPF39-211ENST00000556782 MCCD1P59942 119 aaPredicted RBP7.68□□□□□ -1.18
PRPF39-211ENST00000556782 SRPK2P78362 688 aaKnown RBP7.68□□□□□ -1.18
PRPF39-211ENST00000556782 VPS72Q15906 364 aa7.68□□□□□ -1.18
PRPF39-211ENST00000556782 NBPF8Q3BBV2 869 aa7.68□□□□□ -1.18
PRPF39-211ENST00000556782 BTBD6Q96KE9 485 aa7.68□□□□□ -1.18
PRPF39-211ENST00000556782 GGA1Q9UJY5 639 aa7.68□□□□□ -1.18
PRPF39-211ENST00000556782 TRAK2O60296 914 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 GTF2E1P29083 439 aaPredicted RBP7.67□□□□□ -1.18
PRPF39-211ENST00000556782 CHRNA4P43681 627 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 EFHC2Q5JST6 749 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 ZMYM1Q5SVZ6 1142 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 CNKSR1Q969H4 720 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 ESYT1Q9BSJ8 1104 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 OSBPL3Q9H4L5 887 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 PCDHB11Q9Y5F2 797 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 TONSLQ96HA7 1378 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 NRKQ7Z2Y5 1582 aa7.67□□□□□ -1.18
PRPF39-211ENST00000556782 GNRH1P01148 92 aa7.66□□□□□ -1.18
PRPF39-211ENST00000556782 CENPCQ03188 943 aa7.66□□□□□ -1.18
PRPF39-211ENST00000556782 UBAP2LQ14157 1087 aaKnown RBP7.66□□□□□ -1.18
PRPF39-211ENST00000556782 DOC2BQ14184 412 aa7.66□□□□□ -1.18
PRPF39-211ENST00000556782 MTMR14Q8NCE2 650 aa7.66□□□□□ -1.18
PRPF39-211ENST00000556782 ZSCAN10Q96SZ4 725 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms