RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-223ENST00000556772 CHAMP1Q96JM3 812 aa9.28□□□□□ -0.92
NUMB-223ENST00000556772 CLSTN2Q9H4D0 955 aa9.28□□□□□ -0.92
NUMB-223ENST00000556772 RNF41Q9H4P4 317 aaPredicted RBP9.28□□□□□ -0.92
NUMB-223ENST00000556772 ZBTB3Q9H5J0 574 aa9.28□□□□□ -0.92
NUMB-223ENST00000556772 CCDC175P0C221 793 aa9.27□□□□□ -0.92
NUMB-223ENST00000556772 IGHMBP2P38935 993 aaKnown RBP9.27□□□□□ -0.92
NUMB-223ENST00000556772 CHST3Q7LGC8 479 aa9.27□□□□□ -0.92
NUMB-223ENST00000556772 IQCA1Q86XH1 822 aa9.27□□□□□ -0.92
NUMB-223ENST00000556772 SEPT11Q9NVA2 429 aaKnown RBP9.27□□□□□ -0.92
NUMB-223ENST00000556772 WDR7Q9Y4E6 1490 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 CD2BP2O95400 341 aaKnown RBP9.27□□□□□ -0.93
NUMB-223ENST00000556772 MTIF2P46199 727 aaKnown RBP9.27□□□□□ -0.93
NUMB-223ENST00000556772 NLRP5P59047 1200 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 UTP14AQ9BVJ6 771 aaKnown RBP9.27□□□□□ -0.93
NUMB-223ENST00000556772 MAGI2Q86UL8 1455 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 TDRD12Q587J7 1177 aaKnown RBP9.27□□□□□ -0.93
NUMB-223ENST00000556772 MICALCLQ6ZW33 695 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 ZBTB9Q96C00 473 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 RAD50Q92878 1312 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 RIMS2Q9UQ26 1411 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 EIF4G3O43432 1585 aaKnown RBP9.27□□□□□ -0.93
NUMB-223ENST00000556772 A0A1B0GVL5 298 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 ZBTB43O43298 467 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 NEFHP12036 1026 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 MATR3P43243 847 aaKnown RBP eCLIP9.27□□□□□ -0.93
NUMB-223ENST00000556772 AFMP43652 599 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 FAM160A1Q05DH4 1040 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 KARSQ15046 597 aaKnown RBP9.27□□□□□ -0.93
NUMB-223ENST00000556772 ENOX2Q16206 610 aaKnown RBP9.27□□□□□ -0.93
NUMB-223ENST00000556772 DHX32Q7L7V1 743 aaKnown RBP9.27□□□□□ -0.93
NUMB-223ENST00000556772 CEP112Q8N8E3 955 aa9.27□□□□□ -0.93
NUMB-223ENST00000556772 STARD3NLO95772 234 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 IL13P35225 146 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 GABPB1Q06547 395 aaPredicted RBP9.26□□□□□ -0.93
NUMB-223ENST00000556772 ELF2Q15723 593 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 GPATCH11Q8N954 259 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 CWC25Q9NXE8 425 aaPredicted RBP9.26□□□□□ -0.93
NUMB-223ENST00000556772 MAGI3Q5TCQ9 1506 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 PTPRTO14522 1441 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 PNMA6EA0A0J9YXQ4 647 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 HSPA4P34932 840 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 CWF19L2Q2TBE0 894 aaKnown RBP9.26□□□□□ -0.93
NUMB-223ENST00000556772 LINS1Q8NG48 757 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 ALS2CR12Q96Q35 445 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 CTAGE1Q96RT6 745 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 KDM5CP41229 1560 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 CHL1O00533 1208 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 RPS6KB1P23443 525 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 XAGE3Q8WTP9 111 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 LEO1Q8WVC0 666 aaPredicted RBP9.26□□□□□ -0.93
NUMB-223ENST00000556772 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.26□□□□□ -0.93
NUMB-223ENST00000556772 CTAGE9A4FU28 777 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 EVCP57679 992 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 NPATQ14207 1427 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 HLTFQ14527 1009 aaKnown RBP eCLIP9.26□□□□□ -0.93
NUMB-223ENST00000556772 LDHAL6AQ6ZMR3 332 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 COPS6Q7L5N1 327 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 CATIPQ7Z7H3 387 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 EHBP1Q8NDI1 1231 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 LZTFL1Q9NQ48 299 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 VPS18Q9P253 973 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 BCCIPQ9P287 314 aaKnown RBP eCLIP9.26□□□□□ -0.93
NUMB-223ENST00000556772 ABCC4O15439 1325 aa9.26□□□□□ -0.93
NUMB-223ENST00000556772 CCDC194A0A1B0GVG4 234 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 PRC1O43663 620 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 TTF1Q15361 905 aaPredicted RBP9.25□□□□□ -0.93
NUMB-223ENST00000556772 CCDC178Q5BJE1 867 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 MFSD6Q6ZSS7 791 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 ANKRD24Q8TF21 1146 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 PUF60Q9UHX1 559 aaKnown RBP9.25□□□□□ -0.93
NUMB-223ENST00000556772 KDM6BO15054 1643 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 AOX1Q06278 1338 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 SLC27A2O14975 620 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 ZFYP08048 801 aaPredicted RBP9.25□□□□□ -0.93
NUMB-223ENST00000556772 MNAT1P51948 309 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 IPO4Q8TEX9 1081 aaKnown RBP9.25□□□□□ -0.93
NUMB-223ENST00000556772 ANKRD18BA2A2Z9 1011 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 PHACTR2O75167 634 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 FGFR1OPO95684 399 aaKnown RBP9.25□□□□□ -0.93
NUMB-223ENST00000556772 IFFO1Q0D2I5 559 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 ATL3Q6DD88 541 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 LMBR1LQ6UX01 489 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 TSG101Q99816 390 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 NAA15Q9BXJ9 866 aaKnown RBP9.25□□□□□ -0.93
NUMB-223ENST00000556772 CKAP4Q07065 602 aaKnown RBP9.25□□□□□ -0.93
NUMB-223ENST00000556772 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 TTC21AQ8NDW8 1320 aa9.25□□□□□ -0.93
NUMB-223ENST00000556772 USP5P45974 858 aa9.24□□□□□ -0.93
NUMB-223ENST00000556772 GTF2A1P52655 376 aaPredicted RBP9.24□□□□□ -0.93
NUMB-223ENST00000556772 SEPT7Q16181 437 aaKnown RBP9.24□□□□□ -0.93
NUMB-223ENST00000556772 CDC37L1Q7L3B6 337 aa9.24□□□□□ -0.93
NUMB-223ENST00000556772 CCDC113Q9H0I3 377 aa9.24□□□□□ -0.93
NUMB-223ENST00000556772 PRM3Q9NNZ6 103 aa9.24□□□□□ -0.93
NUMB-223ENST00000556772 PAG1Q9NWQ8 432 aa9.24□□□□□ -0.93
NUMB-223ENST00000556772 PALD1Q9ULE6 856 aa9.24□□□□□ -0.93
NUMB-223ENST00000556772 ABCC2Q92887 1545 aa9.24□□□□□ -0.93
NUMB-223ENST00000556772 SNRPA1P09661 255 aaKnown RBP9.24□□□□□ -0.93
NUMB-223ENST00000556772 SLC5A1P13866 664 aa9.24□□□□□ -0.93
NUMB-223ENST00000556772 TRIM21P19474 475 aaKnown RBP9.24□□□□□ -0.93
NUMB-223ENST00000556772 UBA7P41226 1012 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms