RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 LARGE2Q8N3Y3 721 aa13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 FRAT1Q92837 279 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 EYA3Q99504 573 aa13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 MPHOSPH8Q99549 860 aa13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 XDHP47989 1333 aa13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 DUOX1Q9NRD9 1551 aa13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 COL4A1P02462 1669 aa13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 LTBP1Q14766 1721 aa13.27□□□□□ -0.28
MTHFD1-214ENST00000556771 PPIP5K2O43314 1243 aa13.27□□□□□ -0.29
MTHFD1-214ENST00000556771 UBTFL1P0CB47 393 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-214ENST00000556771 KIAA2012Q0VF49 1180 aa13.27□□□□□ -0.29
MTHFD1-214ENST00000556771 RABL6Q3YEC7 729 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-214ENST00000556771 NIM1KQ8IY84 436 aa13.27□□□□□ -0.29
MTHFD1-214ENST00000556771 SUCLG2Q96I99 432 aa13.27□□□□□ -0.29
MTHFD1-214ENST00000556771 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
MTHFD1-214ENST00000556771 CHMP3Q9Y3E7 222 aa13.27□□□□□ -0.29
MTHFD1-214ENST00000556771 FZD9O00144 591 aa13.26□□□□□ -0.29
MTHFD1-214ENST00000556771 GNAI3P08754 354 aa13.26□□□□□ -0.29
MTHFD1-214ENST00000556771 GPSM2P81274 684 aa13.26□□□□□ -0.29
MTHFD1-214ENST00000556771 EPHA10Q5JZY3 1008 aa13.26□□□□□ -0.29
MTHFD1-214ENST00000556771 ZNF526Q8TF50 670 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-214ENST00000556771 ANKRD2Q9GZV1 360 aa13.26□□□□□ -0.29
MTHFD1-214ENST00000556771 GGA1Q9UJY5 639 aa13.26□□□□□ -0.29
MTHFD1-214ENST00000556771 C6orf229H3BNL8 230 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 MS4A1P11836 297 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 ATP2B4P23634 1241 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 EIF6P56537 245 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 AOC3Q16853 763 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 TAF7LQ5H9L4 462 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 SLC51AQ86UW1 340 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 FTSJ3Q8IY81 847 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 TBC1D16Q8TBP0 767 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 KAZALD1Q96I82 304 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 MINPP1Q9UNW1 487 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
MTHFD1-214ENST00000556771 UFL1O94874 794 aa13.24□□□□□ -0.29
MTHFD1-214ENST00000556771 DZIP1LQ8IYY4 767 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-214ENST00000556771 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
MTHFD1-214ENST00000556771 RCAN3Q9UKA8 241 aa13.24□□□□□ -0.29
MTHFD1-214ENST00000556771 ZNRF3Q9ULT6 936 aa13.24□□□□□ -0.29
MTHFD1-214ENST00000556771 VEGFAP15692 232 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-214ENST00000556771 LDHAL6AQ6ZMR3 332 aa13.23□□□□□ -0.29
MTHFD1-214ENST00000556771 GPC2Q8N158 579 aa13.23□□□□□ -0.29
MTHFD1-214ENST00000556771 ANKRD44Q8N8A2 993 aa13.23□□□□□ -0.29
MTHFD1-214ENST00000556771 CLUAP1Q96AJ1 413 aa13.23□□□□□ -0.29
MTHFD1-214ENST00000556771 L3MBTL3Q96JM7 780 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-214ENST00000556771 ZC3H12CQ9C0D7 883 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-214ENST00000556771 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
MTHFD1-214ENST00000556771 COL4A5P29400 1685 aa13.23□□□□□ -0.29
MTHFD1-214ENST00000556771 ZNF541Q9H0D2 1346 aa13.22□□□□□ -0.29
MTHFD1-214ENST00000556771 IQCA1LA6NCM1 817 aa13.22□□□□□ -0.29
MTHFD1-214ENST00000556771 KIF3CO14782 793 aa13.22□□□□□ -0.29
MTHFD1-214ENST00000556771 MEIS3Q99687 375 aa13.22□□□□□ -0.29
MTHFD1-214ENST00000556771 NMRK2Q9NPI5 230 aa13.22□□□□□ -0.29
MTHFD1-214ENST00000556771 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
MTHFD1-214ENST00000556771 MED23Q9ULK4 1368 aa13.21□□□□□ -0.29
MTHFD1-214ENST00000556771 G3V3G9 751 aa13.21□□□□□ -0.29
MTHFD1-214ENST00000556771 DDNO94850 711 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-214ENST00000556771 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-214ENST00000556771 CHRNDQ07001 517 aa13.21□□□□□ -0.29
MTHFD1-214ENST00000556771 TNIP1Q15025 636 aa13.21□□□□□ -0.29
MTHFD1-214ENST00000556771 DCAF8Q5TAQ9 597 aa13.21□□□□□ -0.29
MTHFD1-214ENST00000556771 C16orf71Q8IYS4 520 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-214ENST00000556771 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-214ENST00000556771 SCN4AP35499 1836 aa13.2□□□□□ -0.3
MTHFD1-214ENST00000556771 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
MTHFD1-214ENST00000556771 KCNJ4P48050 445 aa13.2□□□□□ -0.3
MTHFD1-214ENST00000556771 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
MTHFD1-214ENST00000556771 RRAGCQ9HB90 399 aa13.2□□□□□ -0.3
MTHFD1-214ENST00000556771 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
MTHFD1-214ENST00000556771 LRRFIP2Q9Y608 721 aaKnown RBP13.2□□□□□ -0.3
MTHFD1-214ENST00000556771 ZNF804BA4D1E1 1349 aa13.19□□□□□ -0.3
MTHFD1-214ENST00000556771 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
MTHFD1-214ENST00000556771 ECE2O60344 883 aa13.19□□□□□ -0.3
MTHFD1-214ENST00000556771 TOMM70O94826 608 aa13.19□□□□□ -0.3
MTHFD1-214ENST00000556771 GNAI2P04899 355 aa13.19□□□□□ -0.3
MTHFD1-214ENST00000556771 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
MTHFD1-214ENST00000556771 ZNF594Q96JF6 807 aaPredicted RBP13.19□□□□□ -0.3
MTHFD1-214ENST00000556771 TNNQ9UQP3 1299 aa13.19□□□□□ -0.3
MTHFD1-214ENST00000556771 A0A1B0GUL6 1792 aa13.19□□□□□ -0.3
MTHFD1-214ENST00000556771 LMOD1P29536 600 aaPredicted RBP13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 CXCL9Q07325 125 aa13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 MTX1Q13505 466 aa13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 C15orf52Q6ZUT6 534 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 PODNQ7Z5L7 613 aa13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 ITPRIPQ8IWB1 547 aa13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 RBM46Q8TBY0 533 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 COA1Q9GZY4 146 aa13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 DBNDD1Q9H9R9 158 aa13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 HACL1Q9UJ83 578 aa13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 RIPOR2Q9Y4F9 1068 aa13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 GJA3Q9Y6H8 435 aa13.18□□□□□ -0.3
MTHFD1-214ENST00000556771 YDJCA8MPS7 323 aa13.17□□□□□ -0.3
MTHFD1-214ENST00000556771 CIAO1O76071 339 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms