RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ECE2O60344 883 aa28.99■■■□□ 2.23
ACTN1-220ENST00000556433 CST9Q5W186 159 aa28.99■■■□□ 2.23
ACTN1-220ENST00000556433 PGAP2Q9UHJ9 254 aa28.99■■■□□ 2.23
ACTN1-220ENST00000556433 ANKRD18AQ8IVF6 992 aa28.98■■■□□ 2.23
ACTN1-220ENST00000556433 MICALL2Q8IY33 904 aa28.98■■■□□ 2.23
ACTN1-220ENST00000556433 TRPM4Q8TD43 1214 aa28.98■■■□□ 2.23
ACTN1-220ENST00000556433 ZC3H15Q8WU90 426 aaKnown RBP28.98■■■□□ 2.23
ACTN1-220ENST00000556433 DPF2Q92785 391 aa28.98■■■□□ 2.23
ACTN1-220ENST00000556433 KCNQ5Q9NR82 932 aa28.98■■■□□ 2.23
ACTN1-220ENST00000556433 WDR33Q9C0J8 1336 aaKnown RBP28.97■■■□□ 2.23
ACTN1-220ENST00000556433 FOXN1O15353 648 aa28.97■■■□□ 2.23
ACTN1-220ENST00000556433 UFL1O94874 794 aa28.97■■■□□ 2.23
ACTN1-220ENST00000556433 CWF19L2Q2TBE0 894 aaKnown RBP28.97■■■□□ 2.23
ACTN1-220ENST00000556433 GLIS2Q9BZE0 524 aaPredicted RBP28.97■■■□□ 2.23
ACTN1-220ENST00000556433 GGA1Q9UJY5 639 aa28.97■■■□□ 2.23
ACTN1-220ENST00000556433 G3V3G9 751 aa28.96■■■□□ 2.23
ACTN1-220ENST00000556433 DCAF8Q5TAQ9 597 aa28.96■■■□□ 2.23
ACTN1-220ENST00000556433 WDR63Q8IWG1 891 aa28.96■■■□□ 2.23
ACTN1-220ENST00000556433 AIDAQ96BJ3 306 aa28.96■■■□□ 2.23
ACTN1-220ENST00000556433 FANCIQ9NVI1 1328 aa28.95■■■□□ 2.23
ACTN1-220ENST00000556433 NEURL1BA8MQ27 555 aa28.95■■■□□ 2.22
ACTN1-220ENST00000556433 CTSWP56202 376 aa28.95■■■□□ 2.22
ACTN1-220ENST00000556433 PAXIP1Q6ZW49 1069 aaPredicted RBP28.94■■■□□ 2.22
ACTN1-220ENST00000556433 TTLL11Q8NHH1 800 aa28.94■■■□□ 2.22
ACTN1-220ENST00000556433 WBP1LQ9NX94 342 aa28.94■■■□□ 2.22
ACTN1-220ENST00000556433 CELF2O95319 508 aaKnown RBP28.93■■■□□ 2.22
ACTN1-220ENST00000556433 RPS12P25398 132 aaKnown RBP28.93■■■□□ 2.22
ACTN1-220ENST00000556433 FLIIQ13045 1269 aa28.93■■■□□ 2.22
ACTN1-220ENST00000556433 CDC37L1Q7L3B6 337 aa28.93■■■□□ 2.22
ACTN1-220ENST00000556433 SAMD7Q7Z3H4 446 aa28.93■■■□□ 2.22
ACTN1-220ENST00000556433 CDC5LQ99459 802 aaKnown RBP28.93■■■□□ 2.22
ACTN1-220ENST00000556433 RTL9Q8NET4 1388 aa28.92■■■□□ 2.22
ACTN1-220ENST00000556433 H7C1W4 665 aa28.92■■■□□ 2.22
ACTN1-220ENST00000556433 VAMP4O75379 141 aa28.92■■■□□ 2.22
ACTN1-220ENST00000556433 TLL2Q9Y6L7 1015 aa28.92■■■□□ 2.22
ACTN1-220ENST00000556433 ECE1P42892 770 aa28.91■■■□□ 2.22
ACTN1-220ENST00000556433 FKBP5Q13451 457 aaPredicted RBP28.91■■■□□ 2.22
ACTN1-220ENST00000556433 TBC1D10BQ4KMP7 808 aaPredicted RBP28.91■■■□□ 2.22
ACTN1-220ENST00000556433 CAPNS2Q96L46 248 aa28.91■■■□□ 2.22
ACTN1-220ENST00000556433 GREM2Q9H772 168 aa28.91■■■□□ 2.22
ACTN1-220ENST00000556433 XDHP47989 1333 aa28.91■■■□□ 2.22
ACTN1-220ENST00000556433 VIL1P09327 827 aaKnown RBP28.9■■■□□ 2.22
ACTN1-220ENST00000556433 ATP2B4P23634 1241 aa28.9■■■□□ 2.22
ACTN1-220ENST00000556433 CTCFP49711 727 aaPredicted RBP28.9■■■□□ 2.22
ACTN1-220ENST00000556433 EXOSC9Q06265 439 aaKnown RBP28.9■■■□□ 2.22
ACTN1-220ENST00000556433 GRM1Q13255 1194 aa28.9■■■□□ 2.22
ACTN1-220ENST00000556433 RBM26Q5T8P6 1007 aaKnown RBP28.9■■■□□ 2.22
ACTN1-220ENST00000556433 CYP4F22Q6NT55 531 aa28.9■■■□□ 2.22
ACTN1-220ENST00000556433 UBE3BQ7Z3V4 1068 aa28.9■■■□□ 2.22
ACTN1-220ENST00000556433 MAP2K1Q02750 393 aaPredicted RBP28.89■■■□□ 2.22
ACTN1-220ENST00000556433 USP48Q86UV5 1035 aa28.89■■■□□ 2.22
ACTN1-220ENST00000556433 ZNF408Q9H9D4 720 aa28.89■■■□□ 2.22
ACTN1-220ENST00000556433 GCKRQ14397 625 aa28.88■■■□□ 2.21
ACTN1-220ENST00000556433 FAM9BQ8IZU0 186 aa28.88■■■□□ 2.21
ACTN1-220ENST00000556433 DNAAF4Q8WXU2 420 aa28.88■■■□□ 2.21
ACTN1-220ENST00000556433 BSDC1Q9NW68 430 aaPredicted RBP28.88■■■□□ 2.21
ACTN1-220ENST00000556433 TRPM7Q96QT4 1865 aa28.87■■■□□ 2.21
ACTN1-220ENST00000556433 CAPN15O75808 1086 aa28.87■■■□□ 2.21
ACTN1-220ENST00000556433 EGFRP00533 1210 aa28.87■■■□□ 2.21
ACTN1-220ENST00000556433 SAPCD2Q86UD0 394 aa28.87■■■□□ 2.21
ACTN1-220ENST00000556433 PRDM10Q9NQV6 1147 aa28.87■■■□□ 2.21
ACTN1-220ENST00000556433 MINPP1Q9UNW1 487 aa28.87■■■□□ 2.21
ACTN1-220ENST00000556433 MYH16Q9H6N6 1097 aa28.86■■■□□ 2.21
ACTN1-220ENST00000556433 LINS1Q8NG48 757 aa28.85■■■□□ 2.21
ACTN1-220ENST00000556433 SPINK5Q9NQ38 1064 aaPredicted RBP28.85■■■□□ 2.21
ACTN1-220ENST00000556433 WTIPA6NIX2 430 aaPredicted RBP28.84■■■□□ 2.21
ACTN1-220ENST00000556433 PLA2G12BQ9BX93 195 aa28.84■■■□□ 2.21
ACTN1-220ENST00000556433 IGHMBP2P38935 993 aaKnown RBP28.83■■■□□ 2.21
ACTN1-220ENST00000556433 LBX1P52954 281 aa28.83■■■□□ 2.21
ACTN1-220ENST00000556433 RSBN1LQ6PCB5 846 aaPredicted RBP28.83■■■□□ 2.21
ACTN1-220ENST00000556433 DLK2Q6UY11 383 aa28.83■■■□□ 2.21
ACTN1-220ENST00000556433 KRT26Q7Z3Y9 468 aa28.83■■■□□ 2.21
ACTN1-220ENST00000556433 DCPSQ96C86 337 aaKnown RBP28.83■■■□□ 2.21
ACTN1-220ENST00000556433 CASP7P55210 303 aa28.82■■■□□ 2.2
ACTN1-220ENST00000556433 KIF4BQ2VIQ3 1234 aa28.82■■■□□ 2.2
ACTN1-220ENST00000556433 PODNQ7Z5L7 613 aa28.82■■■□□ 2.2
ACTN1-220ENST00000556433 AGBL3Q8NEM8 1001 aa28.81■■■□□ 2.2
ACTN1-220ENST00000556433 SCN9AQ15858 1988 aa28.81■■■□□ 2.2
ACTN1-220ENST00000556433 CSF1RP07333 972 aa28.8■■■□□ 2.2
ACTN1-220ENST00000556433 ITGA6P23229 1130 aa28.8■■■□□ 2.2
ACTN1-220ENST00000556433 MAP2K2P36507 400 aa28.8■■■□□ 2.2
ACTN1-220ENST00000556433 CCT4P50991 539 aaKnown RBP28.8■■■□□ 2.2
ACTN1-220ENST00000556433 HHIPL1Q96JK4 782 aa28.8■■■□□ 2.2
ACTN1-220ENST00000556433 BEGAINQ9BUH8 593 aa28.8■■■□□ 2.2
ACTN1-220ENST00000556433 USP17L3A6NCW0 530 aa28.79■■■□□ 2.2
ACTN1-220ENST00000556433 USP17L4A6NCW7 530 aa28.79■■■□□ 2.2
ACTN1-220ENST00000556433 AOC2O75106 756 aa28.79■■■□□ 2.2
ACTN1-220ENST00000556433 HSPA8P11142 646 aaKnown RBP28.79■■■□□ 2.2
ACTN1-220ENST00000556433 USP17L1Q7RTZ2 530 aa28.79■■■□□ 2.2
ACTN1-220ENST00000556433 F6X3S4 739 aa28.78■■■□□ 2.2
ACTN1-220ENST00000556433 ZNF280AP59817 542 aaPredicted RBP28.78■■■□□ 2.2
ACTN1-220ENST00000556433 FAM161AQ3B820 660 aa28.78■■■□□ 2.2
ACTN1-220ENST00000556433 MPHOSPH8Q99549 860 aa28.78■■■□□ 2.2
ACTN1-220ENST00000556433 LEMD3Q9Y2U8 911 aa28.78■■■□□ 2.2
ACTN1-220ENST00000556433 MED23Q9ULK4 1368 aa28.77■■■□□ 2.2
ACTN1-220ENST00000556433 ADM5C9JUS6 153 aa28.77■■■□□ 2.2
ACTN1-220ENST00000556433 GMLQ99445 158 aa28.77■■■□□ 2.2
ACTN1-220ENST00000556433 USP17L8P0C7I0 530 aa28.76■■■□□ 2.19
ACTN1-220ENST00000556433 ANKRD2Q9GZV1 360 aa28.76■■■□□ 2.19
ACTN1-220ENST00000556433 GGA3Q9NZ52 723 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms