RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 MEGF10Q96KG7 1140 aa8.1□□□□□ -1.11
SCFD1-219ENST00000556413 ATG7O95352 703 aa8.09□□□□□ -1.11
SCFD1-219ENST00000556413 NAA30Q147X3 362 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-219ENST00000556413 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
SCFD1-219ENST00000556413 PIK3R5Q8WYR1 880 aa8.08□□□□□ -1.12
SCFD1-219ENST00000556413 RBSNQ9H1K0 784 aa8.08□□□□□ -1.12
SCFD1-219ENST00000556413 UBAP1LF5GYI3 381 aa8.07□□□□□ -1.12
SCFD1-219ENST00000556413 PTCD1O75127 700 aaKnown RBP8.07□□□□□ -1.12
SCFD1-219ENST00000556413 TRIM33Q9UPN9 1127 aa8.07□□□□□ -1.12
SCFD1-219ENST00000556413 ALX3O95076 343 aa8.06□□□□□ -1.12
SCFD1-219ENST00000556413 SETDB1Q15047 1291 aa8.06□□□□□ -1.12
SCFD1-219ENST00000556413 COL13A1Q5TAT6 717 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-219ENST00000556413 TMEM130Q8N3G9 435 aa8.06□□□□□ -1.12
SCFD1-219ENST00000556413 OR13H1Q8NG92 308 aa8.06□□□□□ -1.12
SCFD1-219ENST00000556413 CLP1Q92989 425 aaKnown RBP8.06□□□□□ -1.12
SCFD1-219ENST00000556413 PSMG3-AS1Q96PY0 264 aa8.06□□□□□ -1.12
SCFD1-219ENST00000556413 MRPL18Q9H0U6 180 aaKnown RBP8.06□□□□□ -1.12
SCFD1-219ENST00000556413 AKTIPQ9H8T0 292 aa8.06□□□□□ -1.12
SCFD1-219ENST00000556413 FAM13BQ9NYF5 915 aa8.06□□□□□ -1.12
SCFD1-219ENST00000556413 ZBTB39O15060 712 aa8.05□□□□□ -1.12
SCFD1-219ENST00000556413 ZAP70P43403 619 aa8.05□□□□□ -1.12
SCFD1-219ENST00000556413 LRP8Q14114 963 aa8.05□□□□□ -1.12
SCFD1-219ENST00000556413 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
SCFD1-219ENST00000556413 SRA1Q9HD15 236 aaKnown RBP8.05□□□□□ -1.12
SCFD1-219ENST00000556413 SLAIN2Q9P270 581 aa8.05□□□□□ -1.12
SCFD1-219ENST00000556413 F8W735 103 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-219ENST00000556413 PRR23CQ6ZRP0 262 aa8.04□□□□□ -1.12
SCFD1-219ENST00000556413 MAP4K3Q8IVH8 894 aa8.04□□□□□ -1.12
SCFD1-219ENST00000556413 CACTIN-AS1Q8N1I8 211 aa8.04□□□□□ -1.12
SCFD1-219ENST00000556413 GPR152Q8TDT2 470 aa8.04□□□□□ -1.12
SCFD1-219ENST00000556413 STIM2Q9P246 746 aa8.04□□□□□ -1.12
SCFD1-219ENST00000556413 HYAL3O43820 417 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-219ENST00000556413 HYAL2Q12891 473 aa8.03□□□□□ -1.12
SCFD1-219ENST00000556413 FNDC3AQ9Y2H6 1198 aaKnown RBP8.03□□□□□ -1.12
SCFD1-219ENST00000556413 PPME1Q9Y570 386 aa8.03□□□□□ -1.12
SCFD1-219ENST00000556413 ATP11AP98196 1134 aa8.02□□□□□ -1.13
SCFD1-219ENST00000556413 TTC39BQ5VTQ0 682 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-219ENST00000556413 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
SCFD1-219ENST00000556413 PBXIP1Q96AQ6 731 aa8.02□□□□□ -1.13
SCFD1-219ENST00000556413 MUC3BQ9H195 1237 aa8.02□□□□□ -1.13
SCFD1-219ENST00000556413 LINC01387J3KSC0 135 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 SCNN1AP37088 669 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 CEP135Q66GS9 1140 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 ADAMTSL4Q6UY14 1074 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 AGGF1Q8N302 714 aaeCLIP8.01□□□□□ -1.13
SCFD1-219ENST00000556413 ABTB2Q8N961 1025 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 GALNT11Q8NCW6 608 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 DCAF11Q8TEB1 546 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 SPACA7Q96KW9 195 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 ZMYND15Q9H091 742 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 RNF112Q9ULX5 631 aa8.01□□□□□ -1.13
SCFD1-219ENST00000556413 KIF4AO95239 1232 aa8□□□□□ -1.13
SCFD1-219ENST00000556413 Q6ZS46 218 aa8□□□□□ -1.13
SCFD1-219ENST00000556413 LACRTQ9GZZ8 138 aa8□□□□□ -1.13
SCFD1-219ENST00000556413 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
SCFD1-219ENST00000556413 ABI2Q9NYB9 513 aaPredicted RBP8□□□□□ -1.13
SCFD1-219ENST00000556413 SEPT3Q9UH03 358 aa8□□□□□ -1.13
SCFD1-219ENST00000556413 SMNDC1O75940 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCFD1-219ENST00000556413 CYP2E1P05181 493 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-219ENST00000556413 ATP2B4P23634 1241 aa7.99□□□□□ -1.13
SCFD1-219ENST00000556413 TXNDC11Q6PKC3 985 aa7.99□□□□□ -1.13
SCFD1-219ENST00000556413 TM4SF5O14894 197 aa7.98□□□□□ -1.13
SCFD1-219ENST00000556413 CDC27P30260 824 aa7.98□□□□□ -1.13
SCFD1-219ENST00000556413 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.98□□□□□ -1.13
SCFD1-219ENST00000556413 CEP120Q8N960 986 aa7.98□□□□□ -1.13
SCFD1-219ENST00000556413 NUDT16Q96DE0 195 aaKnown RBP7.98□□□□□ -1.13
SCFD1-219ENST00000556413 PBX4Q9BYU1 374 aa7.98□□□□□ -1.13
SCFD1-219ENST00000556413 TMEM63CQ9P1W3 806 aa7.98□□□□□ -1.13
SCFD1-219ENST00000556413 WISP1O95388 367 aa7.97□□□□□ -1.13
SCFD1-219ENST00000556413 GLB1P16278 677 aa7.97□□□□□ -1.13
SCFD1-219ENST00000556413 FSTP19883 344 aa7.97□□□□□ -1.13
SCFD1-219ENST00000556413 CDC25BP30305 580 aa7.97□□□□□ -1.13
SCFD1-219ENST00000556413 ATCAYQ86WG3 371 aa7.97□□□□□ -1.13
SCFD1-219ENST00000556413 NCAPG2Q86XI2 1143 aa7.97□□□□□ -1.13
SCFD1-219ENST00000556413 CCDC97Q96F63 343 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-219ENST00000556413 UBL7Q96S82 380 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-219ENST00000556413 ELP3Q9H9T3 547 aa7.97□□□□□ -1.13
SCFD1-219ENST00000556413 KCNK4Q9NYG8 393 aa7.97□□□□□ -1.13
SCFD1-219ENST00000556413 CD68P34810 354 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-219ENST00000556413 PDE12Q6L8Q7 609 aaKnown RBP7.96□□□□□ -1.14
SCFD1-219ENST00000556413 SLC51AQ86UW1 340 aa7.96□□□□□ -1.14
SCFD1-219ENST00000556413 CARD10Q9BWT7 1032 aa7.96□□□□□ -1.14
SCFD1-219ENST00000556413 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
SCFD1-219ENST00000556413 SERPINA10Q9UK55 444 aa7.96□□□□□ -1.14
SCFD1-219ENST00000556413 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-219ENST00000556413 POP1Q99575 1024 aaKnown RBP7.95□□□□□ -1.14
SCFD1-219ENST00000556413 SH2B1Q9NRF2 756 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-219ENST00000556413 CNTN3Q9P232 1028 aa7.95□□□□□ -1.14
SCFD1-219ENST00000556413 KANSL3Q9P2N6 904 aa7.95□□□□□ -1.14
SCFD1-219ENST00000556413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-219ENST00000556413 FSCN2O14926 492 aa7.94□□□□□ -1.14
SCFD1-219ENST00000556413 EPHA1P21709 976 aa7.94□□□□□ -1.14
SCFD1-219ENST00000556413 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
SCFD1-219ENST00000556413 ZNF438Q7Z4V0 828 aa7.94□□□□□ -1.14
SCFD1-219ENST00000556413 HELQQ8TDG4 1101 aa7.94□□□□□ -1.14
SCFD1-219ENST00000556413 PTPRAP18433 802 aa7.93□□□□□ -1.14
SCFD1-219ENST00000556413 XKR5Q6UX68 686 aa7.93□□□□□ -1.14
SCFD1-219ENST00000556413 KLHL23Q8NBE8 558 aa7.93□□□□□ -1.14
SCFD1-219ENST00000556413 EDEM1Q92611 657 aa7.93□□□□□ -1.14
SCFD1-219ENST00000556413 ADAM19Q9H013 955 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms