RNA–Protein interactions for RNA: ENST00000556240.1

GPHN-212, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-212ENST00000556240 CMTR1Q8N1G2 835 aaKnown RBP6.98□□□□□ -1.29
GPHN-212ENST00000556240 TLR7Q9NYK1 1049 aaKnown RBP6.98□□□□□ -1.29
GPHN-212ENST00000556240 LRFN2Q9ULH4 789 aa6.98□□□□□ -1.29
GPHN-212ENST00000556240 XYLBO75191 536 aa6.97□□□□□ -1.29
GPHN-212ENST00000556240 NOS3P29474 1203 aa6.97□□□□□ -1.29
GPHN-212ENST00000556240 LRP8Q14114 963 aa6.97□□□□□ -1.29
GPHN-212ENST00000556240 DEAF1O75398 565 aaPredicted RBP6.96□□□□□ -1.3
GPHN-212ENST00000556240 EGFRP00533 1210 aa6.96□□□□□ -1.3
GPHN-212ENST00000556240 PCSK2P16519 638 aa6.96□□□□□ -1.3
GPHN-212ENST00000556240 IGF2-ASQ6U949 168 aa6.96□□□□□ -1.3
GPHN-212ENST00000556240 TTC16Q8NEE8 873 aa6.96□□□□□ -1.3
GPHN-212ENST00000556240 STIM2Q9P246 746 aa6.96□□□□□ -1.3
GPHN-212ENST00000556240 J3QW42 95 aa6.95□□□□□ -1.3
GPHN-212ENST00000556240 PSAPP07602 524 aa6.95□□□□□ -1.3
GPHN-212ENST00000556240 SSFA2P28290 1259 aa6.95□□□□□ -1.3
GPHN-212ENST00000556240 PIK3R5Q8WYR1 880 aa6.95□□□□□ -1.3
GPHN-212ENST00000556240 PLD4Q96BZ4 506 aa6.95□□□□□ -1.3
GPHN-212ENST00000556240 MEGF10Q96KG7 1140 aa6.95□□□□□ -1.3
GPHN-212ENST00000556240 NSUN5Q96P11 429 aaKnown RBP6.95□□□□□ -1.3
GPHN-212ENST00000556240 FNDC3AQ9Y2H6 1198 aaKnown RBP6.95□□□□□ -1.3
GPHN-212ENST00000556240 LOC102724428A0A0B4J2F2 783 aa6.94□□□□□ -1.3
GPHN-212ENST00000556240 MMP20O60882 483 aa6.94□□□□□ -1.3
GPHN-212ENST00000556240 GHRHP01286 108 aa6.94□□□□□ -1.3
GPHN-212ENST00000556240 RPLP1P05386 114 aaKnown RBP6.94□□□□□ -1.3
GPHN-212ENST00000556240 SIK1P57059 783 aa6.94□□□□□ -1.3
GPHN-212ENST00000556240 GDF6Q6KF10 455 aaPredicted RBP6.94□□□□□ -1.3
GPHN-212ENST00000556240 ALKBH2Q6NS38 261 aa6.94□□□□□ -1.3
GPHN-212ENST00000556240 RETREG2Q8NC44 543 aa6.94□□□□□ -1.3
GPHN-212ENST00000556240 SAP130Q9H0E3 1048 aa6.94□□□□□ -1.3
GPHN-212ENST00000556240 KCNMB2Q9Y691 235 aa6.94□□□□□ -1.3
GPHN-212ENST00000556240 DLL1O00548 723 aa6.93□□□□□ -1.3
GPHN-212ENST00000556240 HYAL3O43820 417 aaPredicted RBP6.93□□□□□ -1.3
GPHN-212ENST00000556240 HELQQ8TDG4 1101 aa6.93□□□□□ -1.3
GPHN-212ENST00000556240 RBSNQ9H1K0 784 aa6.93□□□□□ -1.3
GPHN-212ENST00000556240 SEPT3Q9UH03 358 aa6.93□□□□□ -1.3
GPHN-212ENST00000556240 ZAP70P43403 619 aa6.92□□□□□ -1.3
GPHN-212ENST00000556240 SF3B2Q13435 895 aaKnown RBP6.92□□□□□ -1.3
GPHN-212ENST00000556240 AAMPQ13685 434 aa6.92□□□□□ -1.3
GPHN-212ENST00000556240 ETFBKMTQ8IXQ9 262 aa6.92□□□□□ -1.3
GPHN-212ENST00000556240 IL22RA1Q8N6P7 574 aa6.92□□□□□ -1.3
GPHN-212ENST00000556240 GTF3C2Q8WUA4 911 aaPredicted RBP6.92□□□□□ -1.3
GPHN-212ENST00000556240 KRTAP9-2Q9BYQ4 174 aa6.92□□□□□ -1.3
GPHN-212ENST00000556240 AKTIPQ9H8T0 292 aa6.92□□□□□ -1.3
GPHN-212ENST00000556240 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.91□□□□□ -1.3
GPHN-212ENST00000556240 FAM13AO94988 1023 aa6.91□□□□□ -1.3
GPHN-212ENST00000556240 ALX3O95076 343 aa6.91□□□□□ -1.3
GPHN-212ENST00000556240 ABL1P00519 1130 aa6.91□□□□□ -1.3
GPHN-212ENST00000556240 HOXD8P13378 290 aaPredicted RBP6.91□□□□□ -1.3
GPHN-212ENST00000556240 SOX18P35713 384 aa6.91□□□□□ -1.3
GPHN-212ENST00000556240 PRR23CQ6ZRP0 262 aa6.91□□□□□ -1.3
GPHN-212ENST00000556240 CAPN12Q6ZSI9 719 aa6.91□□□□□ -1.3
GPHN-212ENST00000556240 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
GPHN-212ENST00000556240 SLAIN2Q9P270 581 aa6.91□□□□□ -1.3
GPHN-212ENST00000556240 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
GPHN-212ENST00000556240 NOM1Q5C9Z4 860 aaKnown RBP6.9□□□□□ -1.3
GPHN-212ENST00000556240 NLRP13Q86W25 1043 aa6.9□□□□□ -1.3
GPHN-212ENST00000556240 RNF112Q9ULX5 631 aa6.9□□□□□ -1.3
GPHN-212ENST00000556240 TRIM33Q9UPN9 1127 aa6.9□□□□□ -1.3
GPHN-212ENST00000556240 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
GPHN-212ENST00000556240 UBAP1LF5GYI3 381 aa6.89□□□□□ -1.31
GPHN-212ENST00000556240 F8W735 103 aaPredicted RBP6.89□□□□□ -1.31
GPHN-212ENST00000556240 TNFRSF10BO14763 440 aa6.89□□□□□ -1.31
GPHN-212ENST00000556240 DZIP1LQ8IYY4 767 aaKnown RBP6.89□□□□□ -1.31
GPHN-212ENST00000556240 CCER1Q8TC90 406 aaPredicted RBP6.89□□□□□ -1.31
GPHN-212ENST00000556240 SRA1Q9HD15 236 aaKnown RBP6.89□□□□□ -1.31
GPHN-212ENST00000556240 FKBP4Q02790 459 aaKnown RBP eCLIP6.88□□□□□ -1.31
GPHN-212ENST00000556240 SETDB1Q15047 1291 aa6.88□□□□□ -1.31
GPHN-212ENST00000556240 FAM26DQ5JW98 314 aa6.88□□□□□ -1.31
GPHN-212ENST00000556240 MAP4K3Q8IVH8 894 aa6.88□□□□□ -1.31
GPHN-212ENST00000556240 TMEM130Q8N3G9 435 aa6.88□□□□□ -1.31
GPHN-212ENST00000556240 GPR152Q8TDT2 470 aa6.88□□□□□ -1.31
GPHN-212ENST00000556240 DCAF11Q8TEB1 546 aa6.88□□□□□ -1.31
GPHN-212ENST00000556240 CARNS1A5YM72 827 aa6.87□□□□□ -1.31
GPHN-212ENST00000556240 FSTP19883 344 aa6.87□□□□□ -1.31
GPHN-212ENST00000556240 USP5P45974 858 aa6.87□□□□□ -1.31
GPHN-212ENST00000556240 TTC39BQ5VTQ0 682 aaPredicted RBP6.87□□□□□ -1.31
GPHN-212ENST00000556240 EGFL7Q9UHF1 273 aa6.87□□□□□ -1.31
GPHN-212ENST00000556240 GLB1P16278 677 aa6.86□□□□□ -1.31
GPHN-212ENST00000556240 DNM1Q05193 864 aaKnown RBP6.86□□□□□ -1.31
GPHN-212ENST00000556240 GLYCTKQ8IVS8 523 aa6.86□□□□□ -1.31
GPHN-212ENST00000556240 CACTIN-AS1Q8N1I8 211 aa6.86□□□□□ -1.31
GPHN-212ENST00000556240 AGGF1Q8N302 714 aaeCLIP6.86□□□□□ -1.31
GPHN-212ENST00000556240 OR13H1Q8NG92 308 aa6.86□□□□□ -1.31
GPHN-212ENST00000556240 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
GPHN-212ENST00000556240 PPME1Q9Y570 386 aa6.86□□□□□ -1.31
GPHN-212ENST00000556240 PATL2C9JE40 543 aaKnown RBP6.85□□□□□ -1.31
GPHN-212ENST00000556240 BRD1O95696 1058 aa6.85□□□□□ -1.31
GPHN-212ENST00000556240 MPSTP25325 297 aa6.85□□□□□ -1.31
GPHN-212ENST00000556240 MZF1P28698 734 aaPredicted RBP6.85□□□□□ -1.31
GPHN-212ENST00000556240 EIF1AXP47813 144 aaKnown RBP6.85□□□□□ -1.31
GPHN-212ENST00000556240 ATP11AP98196 1134 aa6.85□□□□□ -1.31
GPHN-212ENST00000556240 HYAL2Q12891 473 aa6.85□□□□□ -1.31
GPHN-212ENST00000556240 COL13A1Q5TAT6 717 aaPredicted RBP6.85□□□□□ -1.31
GPHN-212ENST00000556240 PDE12Q6L8Q7 609 aaKnown RBP6.85□□□□□ -1.31
GPHN-212ENST00000556240 PHLDB3Q6NSJ2 640 aa6.85□□□□□ -1.31
GPHN-212ENST00000556240 Q6ZS46 218 aa6.85□□□□□ -1.31
GPHN-212ENST00000556240 NUDT16Q96DE0 195 aaKnown RBP6.85□□□□□ -1.31
GPHN-212ENST00000556240 LINC01387J3KSC0 135 aa6.84□□□□□ -1.31
GPHN-212ENST00000556240 SCNN1AP37088 669 aa6.84□□□□□ -1.31
GPHN-212ENST00000556240 EHHADHQ08426 723 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms