RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 NBPF20Q3BBV1 942 aa8.3□□□□□ -1.08
HIF1A-208ENST00000556237 SULT6B1Q6IMI4 303 aa8.3□□□□□ -1.08
HIF1A-208ENST00000556237 GTF3C3Q9Y5Q9 886 aa8.3□□□□□ -1.08
HIF1A-208ENST00000556237 XIRP1Q702N8 1843 aaKnown RBP8.3□□□□□ -1.08
HIF1A-208ENST00000556237 NRKQ7Z2Y5 1582 aa8.3□□□□□ -1.08
HIF1A-208ENST00000556237 GPR37L1O60883 481 aa8.29□□□□□ -1.08
HIF1A-208ENST00000556237 TMPOP42166 694 aaKnown RBP8.29□□□□□ -1.08
HIF1A-208ENST00000556237 RIPK4P57078 832 aa8.29□□□□□ -1.08
HIF1A-208ENST00000556237 MCM6Q14566 821 aa8.29□□□□□ -1.08
HIF1A-208ENST00000556237 ARHGEF25Q86VW2 580 aa8.29□□□□□ -1.08
HIF1A-208ENST00000556237 ADAM32Q8TC27 787 aa8.29□□□□□ -1.08
HIF1A-208ENST00000556237 OCSTAMPQ9BR26 566 aa8.29□□□□□ -1.08
HIF1A-208ENST00000556237 SUPT16HQ9Y5B9 1047 aaKnown RBP8.29□□□□□ -1.08
HIF1A-208ENST00000556237 DNMT3AQ9Y6K1 912 aaPredicted RBP8.29□□□□□ -1.08
HIF1A-208ENST00000556237 COL3A1P02461 1466 aaPredicted RBP8.29□□□□□ -1.08
HIF1A-208ENST00000556237 SMG6Q86US8 1419 aaKnown RBP8.29□□□□□ -1.08
HIF1A-208ENST00000556237 PIK3C2AO00443 1686 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 KIF1AQ12756 1690 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 CDK12Q9NYV4 1490 aaPredicted RBP8.28□□□□□ -1.08
HIF1A-208ENST00000556237 FLT4P35916 1363 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 SOCS7O14512 581 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 TOM1O60784 492 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 IRS1P35568 1242 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 MARSP56192 900 aaKnown RBP8.28□□□□□ -1.08
HIF1A-208ENST00000556237 SLFN5Q08AF3 891 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 WWC1Q8IX03 1113 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 PHACTR3Q96KR7 559 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
HIF1A-208ENST00000556237 USP19O94966 1318 aa8.28□□□□□ -1.08
HIF1A-208ENST00000556237 KIF24Q5T7B8 1368 aa8.27□□□□□ -1.09
HIF1A-208ENST00000556237 ADH1AP07327 375 aa8.27□□□□□ -1.09
HIF1A-208ENST00000556237 CCDC27Q2M243 656 aa8.27□□□□□ -1.09
HIF1A-208ENST00000556237 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
HIF1A-208ENST00000556237 AEBP1Q8IUX7 1158 aa8.27□□□□□ -1.09
HIF1A-208ENST00000556237 WDR63Q8IWG1 891 aa8.27□□□□□ -1.09
HIF1A-208ENST00000556237 ZNF784Q8NCA9 323 aaPredicted RBP8.27□□□□□ -1.09
HIF1A-208ENST00000556237 TMPRSS4Q9NRS4 437 aa8.27□□□□□ -1.09
HIF1A-208ENST00000556237 ZNF521Q96K83 1311 aa8.27□□□□□ -1.09
HIF1A-208ENST00000556237 ARHGEF10O15013 1369 aa8.26□□□□□ -1.09
HIF1A-208ENST00000556237 LTBP4Q8N2S1 1624 aa8.26□□□□□ -1.09
HIF1A-208ENST00000556237 E9PSI1 815 aa8.26□□□□□ -1.09
HIF1A-208ENST00000556237 PIP4K2BP78356 416 aa8.26□□□□□ -1.09
HIF1A-208ENST00000556237 NFE2L2Q16236 605 aa8.26□□□□□ -1.09
HIF1A-208ENST00000556237 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
HIF1A-208ENST00000556237 LRRC59Q96AG4 307 aaKnown RBP8.26□□□□□ -1.09
HIF1A-208ENST00000556237 SCARF2Q96GP6 870 aaPredicted RBP8.26□□□□□ -1.09
HIF1A-208ENST00000556237 SHPRHQ149N8 1683 aa8.26□□□□□ -1.09
HIF1A-208ENST00000556237 UBAP1LF5GYI3 381 aa8.25□□□□□ -1.09
HIF1A-208ENST00000556237 ADAMTS2O95450 1211 aa8.25□□□□□ -1.09
HIF1A-208ENST00000556237 IGHA1P01876 353 aa8.25□□□□□ -1.09
HIF1A-208ENST00000556237 RAB15P59190 212 aa8.25□□□□□ -1.09
HIF1A-208ENST00000556237 CHRNA2Q15822 529 aa8.25□□□□□ -1.09
HIF1A-208ENST00000556237 FOXD4L5Q5VV16 416 aaPredicted RBP8.25□□□□□ -1.09
HIF1A-208ENST00000556237 GPAT2Q6NUI2 795 aa8.25□□□□□ -1.09
HIF1A-208ENST00000556237 ANKRD24Q8TF21 1146 aa8.25□□□□□ -1.09
HIF1A-208ENST00000556237 TNS3Q68CZ2 1445 aa8.25□□□□□ -1.09
HIF1A-208ENST00000556237 PXDNQ92626 1479 aa8.25□□□□□ -1.09
HIF1A-208ENST00000556237 NEFLP07196 543 aa8.24□□□□□ -1.09
HIF1A-208ENST00000556237 PTGIRP43119 386 aa8.24□□□□□ -1.09
HIF1A-208ENST00000556237 FOXK2Q01167 660 aa8.24□□□□□ -1.09
HIF1A-208ENST00000556237 MAP3K10Q02779 954 aa8.24□□□□□ -1.09
HIF1A-208ENST00000556237 SRSF11Q05519 484 aaKnown RBP8.24□□□□□ -1.09
HIF1A-208ENST00000556237 NBPF6Q5VWK0 638 aa8.24□□□□□ -1.09
HIF1A-208ENST00000556237 DUSP27Q5VZP5 1158 aa8.24□□□□□ -1.09
HIF1A-208ENST00000556237 DZIP3Q86Y13 1208 aaKnown RBP8.24□□□□□ -1.09
HIF1A-208ENST00000556237 TRMT2AQ8IZ69 625 aaKnown RBP8.24□□□□□ -1.09
HIF1A-208ENST00000556237 NBPF4Q96M43 638 aa8.24□□□□□ -1.09
HIF1A-208ENST00000556237 RCAN3Q9UKA8 241 aa8.24□□□□□ -1.09
HIF1A-208ENST00000556237 IGSF1Q8N6C5 1336 aa8.24□□□□□ -1.09
HIF1A-208ENST00000556237 RTL1A6NKG5 1358 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 PEAK1Q9H792 1746 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 TRPM3Q9HCF6 1732 aaPredicted RBP8.23□□□□□ -1.09
HIF1A-208ENST00000556237 ERVH48-1M5A8F1 160 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 LILRA1O75019 489 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 CSB-PGBD3P0DP91 1061 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 ADD1P35611 737 aaKnown RBP8.23□□□□□ -1.09
HIF1A-208ENST00000556237 LYPD4Q6UWN0 246 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 LYSMD3Q7Z3D4 306 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 USHBP1Q8N6Y0 703 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 PRDM11Q9NQV5 511 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 TBC1D2BQ9UPU7 963 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 SLIT3O75094 1523 aa8.23□□□□□ -1.09
HIF1A-208ENST00000556237 EVA1CP58658 441 aa8.22□□□□□ -1.09
HIF1A-208ENST00000556237 LMOD3Q0VAK6 560 aa8.22□□□□□ -1.09
HIF1A-208ENST00000556237 MTHFSDQ2M296 383 aaKnown RBP8.22□□□□□ -1.09
HIF1A-208ENST00000556237 KDF1Q8NAX2 398 aaPredicted RBP8.22□□□□□ -1.09
HIF1A-208ENST00000556237 MYH16Q9H6N6 1097 aa8.22□□□□□ -1.09
HIF1A-208ENST00000556237 NLRP2Q9NX02 1062 aa8.22□□□□□ -1.09
HIF1A-208ENST00000556237 LAS1LQ9Y4W2 734 aaKnown RBP8.22□□□□□ -1.09
HIF1A-208ENST00000556237 MARF1Q9Y4F3 1742 aaKnown RBP8.22□□□□□ -1.09
HIF1A-208ENST00000556237 NFAT5O94916 1531 aa8.22□□□□□ -1.09
HIF1A-208ENST00000556237 KIAA0232Q92628 1395 aa8.22□□□□□ -1.09
HIF1A-208ENST00000556237 USP54Q70EL1 1684 aa8.21□□□□□ -1.09
HIF1A-208ENST00000556237 ALS2Q96Q42 1657 aa8.21□□□□□ -1.09
HIF1A-208ENST00000556237 FAM83GA6ND36 823 aa8.21□□□□□ -1.1
HIF1A-208ENST00000556237 CALD1Q05682 793 aaKnown RBP8.21□□□□□ -1.1
HIF1A-208ENST00000556237 FLIIQ13045 1269 aa8.21□□□□□ -1.1
HIF1A-208ENST00000556237 DCTN1Q14203 1278 aa8.21□□□□□ -1.1
HIF1A-208ENST00000556237 GAS6Q14393 721 aa8.21□□□□□ -1.1
HIF1A-208ENST00000556237 PLEKHO1Q53GL0 409 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms