RNA–Protein interactions for RNA: ENST00000556138.1

LINC01550-205, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 4

Gene LINC01550, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-205ENST00000556138 CNTN3Q9P232 1028 aa7.13□□□□□ -1.27
LINC01550-205ENST00000556138 POLIQ9UNA4 740 aa7.13□□□□□ -1.27
LINC01550-205ENST00000556138 FNDC3AQ9Y2H6 1198 aaKnown RBP7.13□□□□□ -1.27
LINC01550-205ENST00000556138 A0A0A0MRY4 1105 aa7.12□□□□□ -1.27
LINC01550-205ENST00000556138 MZF1P28698 734 aaPredicted RBP7.12□□□□□ -1.27
LINC01550-205ENST00000556138 FKBP4Q02790 459 aaKnown RBP eCLIP7.12□□□□□ -1.27
LINC01550-205ENST00000556138 ECM1Q16610 540 aa7.12□□□□□ -1.27
LINC01550-205ENST00000556138 ADAMTSL4Q6UY14 1074 aa7.12□□□□□ -1.27
LINC01550-205ENST00000556138 CCDC87Q9NVE4 849 aa7.12□□□□□ -1.27
LINC01550-205ENST00000556138 IGHA1P01876 353 aa7.11□□□□□ -1.27
LINC01550-205ENST00000556138 ARID4AP29374 1257 aaPredicted RBP7.11□□□□□ -1.27
LINC01550-205ENST00000556138 BAG6P46379 1132 aa7.11□□□□□ -1.27
LINC01550-205ENST00000556138 ATP11AP98196 1134 aa7.11□□□□□ -1.27
LINC01550-205ENST00000556138 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
LINC01550-205ENST00000556138 C8orf34Q49A92 452 aa7.11□□□□□ -1.27
LINC01550-205ENST00000556138 PRRT3Q5FWE3 981 aa7.11□□□□□ -1.27
LINC01550-205ENST00000556138 ZNF438Q7Z4V0 828 aa7.11□□□□□ -1.27
LINC01550-205ENST00000556138 TTC9Q92623 222 aa7.11□□□□□ -1.27
LINC01550-205ENST00000556138 KANSL3Q9P2N6 904 aa7.11□□□□□ -1.27
LINC01550-205ENST00000556138 SPDYE3A6NKU9 549 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 ICMTO60725 284 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 FAM13AO94988 1023 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 GHRHP01286 108 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 ACPPP15309 386 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 SF3B2Q13435 895 aaKnown RBP7.1□□□□□ -1.27
LINC01550-205ENST00000556138 TTC39BQ5VTQ0 682 aaPredicted RBP7.1□□□□□ -1.27
LINC01550-205ENST00000556138 MSL1Q68DK7 614 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 PDE12Q6L8Q7 609 aaKnown RBP7.1□□□□□ -1.27
LINC01550-205ENST00000556138 TXNDC2Q86VQ3 553 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 C1orf127Q8N9H9 656 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 TRIM33Q9UPN9 1127 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 MTMR7Q9Y216 660 aa7.1□□□□□ -1.27
LINC01550-205ENST00000556138 H3BRB1 525 aa7.09□□□□□ -1.27
LINC01550-205ENST00000556138 KIF4AO95239 1232 aa7.09□□□□□ -1.27
LINC01550-205ENST00000556138 SELPP16109 830 aa7.09□□□□□ -1.27
LINC01550-205ENST00000556138 AAMPQ13685 434 aa7.09□□□□□ -1.27
LINC01550-205ENST00000556138 GDF6Q6KF10 455 aaPredicted RBP7.09□□□□□ -1.27
LINC01550-205ENST00000556138 ALKBH2Q6NS38 261 aa7.09□□□□□ -1.27
LINC01550-205ENST00000556138 SHISA2Q6UWI4 295 aa7.09□□□□□ -1.27
LINC01550-205ENST00000556138 XKR5Q6UX68 686 aa7.09□□□□□ -1.27
LINC01550-205ENST00000556138 CHRDQ9H2X0 955 aa7.09□□□□□ -1.27
LINC01550-205ENST00000556138 TUT1Q9H6E5 874 aaKnown RBP7.09□□□□□ -1.27
LINC01550-205ENST00000556138 HYAL2Q12891 473 aa7.08□□□□□ -1.28
LINC01550-205ENST00000556138 B4GALNT3Q6L9W6 998 aa7.08□□□□□ -1.28
LINC01550-205ENST00000556138 WFDC8Q8IUA0 241 aa7.08□□□□□ -1.28
LINC01550-205ENST00000556138 FMR1NBQ8N0W7 255 aaPredicted RBP7.08□□□□□ -1.28
LINC01550-205ENST00000556138 RASSF4Q9H2L5 321 aa7.08□□□□□ -1.28
LINC01550-205ENST00000556138 EGFL7Q9UHF1 273 aa7.08□□□□□ -1.28
LINC01550-205ENST00000556138 FOXD3Q9UJU5 478 aaPredicted RBP7.08□□□□□ -1.28
LINC01550-205ENST00000556138 DEAF1O75398 565 aaPredicted RBP7.07□□□□□ -1.28
LINC01550-205ENST00000556138 CEP120Q8N960 986 aa7.07□□□□□ -1.28
LINC01550-205ENST00000556138 TRPA1O75762 1119 aa7.06□□□□□ -1.28
LINC01550-205ENST00000556138 RPLP1P05386 114 aaKnown RBP7.06□□□□□ -1.28
LINC01550-205ENST00000556138 ELNP15502 786 aa7.06□□□□□ -1.28
LINC01550-205ENST00000556138 PCSK2P16519 638 aa7.06□□□□□ -1.28
LINC01550-205ENST00000556138 RAC1P63000 192 aa7.06□□□□□ -1.28
LINC01550-205ENST00000556138 ARHGAP4P98171 946 aa7.06□□□□□ -1.28
LINC01550-205ENST00000556138 GJD3Q8N144 294 aa7.06□□□□□ -1.28
LINC01550-205ENST00000556138 IL22RA1Q8N6P7 574 aa7.06□□□□□ -1.28
LINC01550-205ENST00000556138 SALL4Q9UJQ4 1053 aa7.06□□□□□ -1.28
LINC01550-205ENST00000556138 EREGO14944 169 aa7.05□□□□□ -1.28
LINC01550-205ENST00000556138 TNFRSF21O75509 655 aa7.05□□□□□ -1.28
LINC01550-205ENST00000556138 APBA3O96018 575 aa7.05□□□□□ -1.28
LINC01550-205ENST00000556138 CEP135Q66GS9 1140 aa7.05□□□□□ -1.28
LINC01550-205ENST00000556138 NCAPG2Q86XI2 1143 aa7.05□□□□□ -1.28
LINC01550-205ENST00000556138 GLYCTKQ8IVS8 523 aa7.05□□□□□ -1.28
LINC01550-205ENST00000556138 LACRTQ9GZZ8 138 aa7.05□□□□□ -1.28
LINC01550-205ENST00000556138 RBSNQ9H1K0 784 aa7.05□□□□□ -1.28
LINC01550-205ENST00000556138 FURINP09958 794 aa7.04□□□□□ -1.28
LINC01550-205ENST00000556138 CES1P23141 567 aa7.04□□□□□ -1.28
LINC01550-205ENST00000556138 GATA4P43694 442 aa7.04□□□□□ -1.28
LINC01550-205ENST00000556138 DOC2BQ14184 412 aa7.04□□□□□ -1.28
LINC01550-205ENST00000556138 FBXO11Q86XK2 927 aa7.04□□□□□ -1.28
LINC01550-205ENST00000556138 HHIPQ96QV1 700 aa7.04□□□□□ -1.28
LINC01550-205ENST00000556138 POP1Q99575 1024 aaKnown RBP7.04□□□□□ -1.28
LINC01550-205ENST00000556138 NFKBIEO00221 500 aa7.03□□□□□ -1.28
LINC01550-205ENST00000556138 MBTPS1Q14703 1052 aa7.03□□□□□ -1.28
LINC01550-205ENST00000556138 SETDB1Q15047 1291 aa7.03□□□□□ -1.28
LINC01550-205ENST00000556138 TXNDC11Q6PKC3 985 aa7.03□□□□□ -1.28
LINC01550-205ENST00000556138 DTWD1Q8N5C7 304 aa7.03□□□□□ -1.28
LINC01550-205ENST00000556138 SPACA7Q96KW9 195 aa7.03□□□□□ -1.28
LINC01550-205ENST00000556138 PBX4Q9BYU1 374 aa7.03□□□□□ -1.28
LINC01550-205ENST00000556138 DLL1O00548 723 aa7.02□□□□□ -1.29
LINC01550-205ENST00000556138 PHACTR2O75167 634 aa7.02□□□□□ -1.29
LINC01550-205ENST00000556138 CDC25BP30305 580 aa7.02□□□□□ -1.29
LINC01550-205ENST00000556138 ADGRE1Q14246 886 aa7.02□□□□□ -1.29
LINC01550-205ENST00000556138 SUZ12Q15022 739 aaKnown RBP7.02□□□□□ -1.29
LINC01550-205ENST00000556138 TTC16Q8NEE8 873 aa7.02□□□□□ -1.29
LINC01550-205ENST00000556138 SNX29Q8TEQ0 813 aa7.02□□□□□ -1.29
LINC01550-205ENST00000556138 LENG1Q96BZ8 264 aaPredicted RBP7.02□□□□□ -1.29
LINC01550-205ENST00000556138 NACC1Q96RE7 527 aa7.02□□□□□ -1.29
LINC01550-205ENST00000556138 SH2B1Q9NRF2 756 aaPredicted RBP7.02□□□□□ -1.29
LINC01550-205ENST00000556138 LATS2Q9NRM7 1088 aa7.02□□□□□ -1.29
LINC01550-205ENST00000556138 DZANK1Q9NVP4 752 aa7.02□□□□□ -1.29
LINC01550-205ENST00000556138 LINC01387J3KSC0 135 aa7.01□□□□□ -1.29
LINC01550-205ENST00000556138 TM4SF5O14894 197 aa7.01□□□□□ -1.29
LINC01550-205ENST00000556138 SMNDC1O75940 238 aaKnown RBP eCLIP7.01□□□□□ -1.29
LINC01550-205ENST00000556138 POLR3DP05423 398 aaPredicted RBP7.01□□□□□ -1.29
LINC01550-205ENST00000556138 EPHA1P21709 976 aa7.01□□□□□ -1.29
LINC01550-205ENST00000556138 USP5P45974 858 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms