RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 C6orf229H3BNL8 230 aa18.66■□□□□ 0.58
CHMP4BP1-201ENST00000556017 H7C1D1 291 aa18.66■□□□□ 0.58
CHMP4BP1-201ENST00000556017 TBC1D10BQ4KMP7 808 aaPredicted RBP18.66■□□□□ 0.58
CHMP4BP1-201ENST00000556017 ZNF408Q9H9D4 720 aa18.66■□□□□ 0.58
CHMP4BP1-201ENST00000556017 IFT57Q9NWB7 429 aa18.66■□□□□ 0.58
CHMP4BP1-201ENST00000556017 ZNF609O15014 1411 aa18.66■□□□□ 0.58
CHMP4BP1-201ENST00000556017 MYH3P11055 1940 aa18.65■□□□□ 0.58
CHMP4BP1-201ENST00000556017 ELL2O00472 640 aaPredicted RBP18.65■□□□□ 0.58
CHMP4BP1-201ENST00000556017 VIL1P09327 827 aaKnown RBP18.65■□□□□ 0.58
CHMP4BP1-201ENST00000556017 JARID2Q92833 1246 aaPredicted RBP18.65■□□□□ 0.58
CHMP4BP1-201ENST00000556017 ASTN2O75129 1339 aaPredicted RBP18.65■□□□□ 0.58
CHMP4BP1-201ENST00000556017 SPEF2Q9C093 1822 aa18.65■□□□□ 0.58
CHMP4BP1-201ENST00000556017 WTIPA6NIX2 430 aaPredicted RBP18.64■□□□□ 0.57
CHMP4BP1-201ENST00000556017 FAM155AB1AL88 458 aaPredicted RBP18.64■□□□□ 0.57
CHMP4BP1-201ENST00000556017 RPS12P25398 132 aaKnown RBP18.64■□□□□ 0.57
CHMP4BP1-201ENST00000556017 BRPF1P55201 1214 aaPredicted RBP18.64■□□□□ 0.57
CHMP4BP1-201ENST00000556017 MYD88Q99836 296 aa18.64■□□□□ 0.57
CHMP4BP1-201ENST00000556017 ADM5C9JUS6 153 aa18.63■□□□□ 0.57
CHMP4BP1-201ENST00000556017 PCCAP05165 728 aaPredicted RBP18.63■□□□□ 0.57
CHMP4BP1-201ENST00000556017 RIC3Q7Z5B4 369 aa18.63■□□□□ 0.57
CHMP4BP1-201ENST00000556017 TSPYL6Q8N831 410 aa18.63■□□□□ 0.57
CHMP4BP1-201ENST00000556017 CCDC191Q8NCU4 936 aa18.63■□□□□ 0.57
CHMP4BP1-201ENST00000556017 GMLQ99445 158 aa18.62■□□□□ 0.57
CHMP4BP1-201ENST00000556017 BEGAINQ9BUH8 593 aa18.62■□□□□ 0.57
CHMP4BP1-201ENST00000556017 TNRC18O15417 2968 aaPredicted RBP18.62■□□□□ 0.57
CHMP4BP1-201ENST00000556017 IGKV5-2P06315 115 aa18.61■□□□□ 0.57
CHMP4BP1-201ENST00000556017 HUNKP57058 714 aa18.61■□□□□ 0.57
CHMP4BP1-201ENST00000556017 GNAI1P63096 354 aa18.61■□□□□ 0.57
CHMP4BP1-201ENST00000556017 GOLGA2Q08379 1002 aa18.61■□□□□ 0.57
CHMP4BP1-201ENST00000556017 KRT26Q7Z3Y9 468 aa18.61■□□□□ 0.57
CHMP4BP1-201ENST00000556017 EYA3Q99504 573 aa18.61■□□□□ 0.57
CHMP4BP1-201ENST00000556017 METTL22Q9BUU2 404 aaPredicted RBP18.61■□□□□ 0.57
CHMP4BP1-201ENST00000556017 PDE8AO60658 829 aa18.6■□□□□ 0.57
CHMP4BP1-201ENST00000556017 UFL1O94874 794 aa18.6■□□□□ 0.57
CHMP4BP1-201ENST00000556017 ZNF280AP59817 542 aaPredicted RBP18.6■□□□□ 0.57
CHMP4BP1-201ENST00000556017 RBM26Q5T8P6 1007 aaKnown RBP18.6■□□□□ 0.57
CHMP4BP1-201ENST00000556017 CA12O43570 354 aa18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 RGS19P49795 217 aa18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 NOGQ13253 232 aa18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 KIF4BQ2VIQ3 1234 aa18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 CCDC184Q52MB2 194 aa18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 CCDC85AQ96PX6 553 aaPredicted RBP18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 ZC3H12CQ9C0D7 883 aaKnown RBP18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 GBA2Q9HCG7 927 aaPredicted RBP18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 CWC25Q9NXE8 425 aaPredicted RBP18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 AKAP11Q9UKA4 1901 aa18.59■□□□□ 0.57
CHMP4BP1-201ENST00000556017 CCDC152Q4G0S7 254 aa18.58■□□□□ 0.56
CHMP4BP1-201ENST00000556017 RGMBQ6NW40 437 aa18.58■□□□□ 0.56
CHMP4BP1-201ENST00000556017 MCOLN1Q9GZU1 580 aa18.58■□□□□ 0.56
CHMP4BP1-201ENST00000556017 GGA3Q9NZ52 723 aa18.58■□□□□ 0.56
CHMP4BP1-201ENST00000556017 GGA1Q9UJY5 639 aa18.58■□□□□ 0.56
CHMP4BP1-201ENST00000556017 FAM161AQ3B820 660 aa18.57■□□□□ 0.56
CHMP4BP1-201ENST00000556017 RSBN1LQ6PCB5 846 aaPredicted RBP18.57■□□□□ 0.56
CHMP4BP1-201ENST00000556017 ANKIB1Q9P2G1 1089 aa18.57■□□□□ 0.56
CHMP4BP1-201ENST00000556017 MAP3K2Q9Y2U5 619 aa18.57■□□□□ 0.56
CHMP4BP1-201ENST00000556017 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
CHMP4BP1-201ENST00000556017 DCPSQ96C86 337 aaKnown RBP18.56■□□□□ 0.56
CHMP4BP1-201ENST00000556017 XDHP47989 1333 aa18.55■□□□□ 0.56
CHMP4BP1-201ENST00000556017 PI4KAP2A4QPH2 592 aa18.55■□□□□ 0.56
CHMP4BP1-201ENST00000556017 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
CHMP4BP1-201ENST00000556017 G2E3Q7L622 706 aa18.55■□□□□ 0.56
CHMP4BP1-201ENST00000556017 PI4KAP1Q8N8J0 262 aa18.55■□□□□ 0.56
CHMP4BP1-201ENST00000556017 AGBL3Q8NEM8 1001 aa18.55■□□□□ 0.56
CHMP4BP1-201ENST00000556017 TSR2Q969E8 191 aaKnown RBP18.55■□□□□ 0.56
CHMP4BP1-201ENST00000556017 CDCA5Q96FF9 252 aa18.55■□□□□ 0.56
CHMP4BP1-201ENST00000556017 CCDC85CA6NKD9 419 aa18.54■□□□□ 0.56
CHMP4BP1-201ENST00000556017 CTSWP56202 376 aa18.54■□□□□ 0.56
CHMP4BP1-201ENST00000556017 KIF23Q02241 960 aaPredicted RBP18.54■□□□□ 0.56
CHMP4BP1-201ENST00000556017 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
CHMP4BP1-201ENST00000556017 SCARF1Q14162 830 aa18.54■□□□□ 0.56
CHMP4BP1-201ENST00000556017 KSR2Q6VAB6 950 aa18.54■□□□□ 0.56
CHMP4BP1-201ENST00000556017 GREM2Q9H772 168 aa18.54■□□□□ 0.56
CHMP4BP1-201ENST00000556017 MINPP1Q9UNW1 487 aa18.54■□□□□ 0.56
CHMP4BP1-201ENST00000556017 PAPPA2Q9BXP8 1791 aa18.54■□□□□ 0.56
CHMP4BP1-201ENST00000556017 A0A1B0GUL6 1792 aa18.53■□□□□ 0.56
CHMP4BP1-201ENST00000556017 SLC10A3P09131 477 aa18.53■□□□□ 0.56
CHMP4BP1-201ENST00000556017 CWF19L2Q2TBE0 894 aaKnown RBP18.53■□□□□ 0.56
CHMP4BP1-201ENST00000556017 ANGEL2Q5VTE6 544 aaKnown RBP18.53■□□□□ 0.56
CHMP4BP1-201ENST00000556017 ANKRD18AQ8IVF6 992 aa18.53■□□□□ 0.56
CHMP4BP1-201ENST00000556017 C2orf69Q8N8R5 385 aa18.53■□□□□ 0.56
CHMP4BP1-201ENST00000556017 SCAF8Q9UPN6 1271 aaKnown RBP18.53■□□□□ 0.56
CHMP4BP1-201ENST00000556017 HSP90B1P14625 803 aaKnown RBP18.52■□□□□ 0.56
CHMP4BP1-201ENST00000556017 TXNRD3Q86VQ6 643 aa18.52■□□□□ 0.56
CHMP4BP1-201ENST00000556017 CSRNP1Q96S65 589 aa18.52■□□□□ 0.56
CHMP4BP1-201ENST00000556017 MXD3Q9BW11 206 aa18.52■□□□□ 0.56
CHMP4BP1-201ENST00000556017 MED23Q9ULK4 1368 aa18.52■□□□□ 0.55
CHMP4BP1-201ENST00000556017 CACNA1FO60840 1977 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 NEURL1BA8MQ27 555 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 DDX58O95786 925 aaKnown RBP18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 ATP2B4P23634 1241 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 ZNF157P51786 506 aaPredicted RBP18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 CASP7P55210 303 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 DACT2Q5SW24 774 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 PODNQ7Z5L7 613 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 SULF1Q8IWU6 871 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 CCDC102AQ96A19 550 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 MYOZ2Q9NPC6 264 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 BSDC1Q9NW68 430 aaPredicted RBP18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 RNF186Q9NXI6 227 aa18.51■□□□□ 0.55
CHMP4BP1-201ENST00000556017 SAGE1Q9NXZ1 904 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms