RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 TTC14Q96N46 770 aa12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 CYP46A1Q9Y6A2 500 aa12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 ZNF831Q5JPB2 1677 aa12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 RGL2O15211 777 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 ATP2B3Q16720 1220 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 VPS53Q5VIR6 699 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 CLEC17AQ6ZS10 378 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 LINC00116Q8NCU8 138 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 GOLGA6L22H0YM25 854 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 SLC27A2O14975 620 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 PDE8BO95263 885 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 SSFA2P28290 1259 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 AK2P54819 239 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 FKBP4Q02790 459 aaKnown RBP eCLIP12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 TSGA10IPQ3SY00 556 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 NOL8Q76FK4 1167 aaKnown RBP12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 RUFY3Q7L099 469 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 LIMCH1Q9UPQ0 1083 aa12.1□□□□□ -0.47
EFCAB11-209ENST00000556005 ABCC12Q96J65 1359 aa12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 MROH5Q6ZUA9 1318 aa12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 CYP2E1P05181 493 aaPredicted RBP12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 HCLS1P14317 486 aaPredicted RBP12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 ADORA1P30542 326 aa12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 ADCK5Q3MIX3 580 aa12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 CCDC152Q4G0S7 254 aa12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 PDRG1Q9NUG6 133 aa12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 MYH14Q7Z406 1995 aaKnown RBP12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 MYH3P11055 1940 aa12.09□□□□□ -0.47
EFCAB11-209ENST00000556005 RNF113AO15541 343 aaKnown RBP12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 NTSR2O95665 410 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 HSPA1LP34931 641 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 KRT32Q14532 448 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 VGLL2Q8N8G2 317 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 ZNF512BQ96KM6 892 aaPredicted RBP12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 MPHOSPH8Q99549 860 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 RIC1Q4ADV7 1423 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 TRAK2O60296 914 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 ONECUT3O60422 494 aaPredicted RBP12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 ZFYP08048 801 aaPredicted RBP12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 ZMYM1Q5SVZ6 1142 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 ZSCAN31Q96LW9 406 aaPredicted RBP12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 SEC62Q99442 399 aaKnown RBP12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 TRPC5Q9UL62 973 aaPredicted RBP12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 SPEF2Q9C093 1822 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 THSD7AQ9UPZ6 1657 aa12.08□□□□□ -0.48
EFCAB11-209ENST00000556005 COL5A3P25940 1745 aaPredicted RBP12.07□□□□□ -0.48
EFCAB11-209ENST00000556005 AFF2P51816 1311 aa12.07□□□□□ -0.48
EFCAB11-209ENST00000556005 RPS6KA4O75676 772 aa12.07□□□□□ -0.48
EFCAB11-209ENST00000556005 PUM3Q15397 648 aaKnown RBP12.07□□□□□ -0.48
EFCAB11-209ENST00000556005 SKOR2Q2VWA4 1001 aaPredicted RBP12.07□□□□□ -0.48
EFCAB11-209ENST00000556005 LPIN2Q92539 896 aa12.07□□□□□ -0.48
EFCAB11-209ENST00000556005 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.07□□□□□ -0.48
EFCAB11-209ENST00000556005 CPA1P15085 419 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 IGHMBP2P38935 993 aaKnown RBP12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 KCNQ4P56696 695 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 ANKRD1Q15327 319 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 BLOC1S2Q6QNY1 142 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 CCDC129Q6ZRS4 1044 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 PTF1AQ7RTS3 328 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 DSCC1Q9BVC3 393 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 SH2B1Q9NRF2 756 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 RTL9Q8NET4 1388 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 RPAP1Q9BWH6 1393 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 BAG4O95429 457 aaKnown RBP12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 CHGBP05060 677 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 PKP1Q13835 747 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 TTF1Q15361 905 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 ALDH8A1Q9H2A2 487 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 NARFQ9UHQ1 456 aa12.06□□□□□ -0.48
EFCAB11-209ENST00000556005 ZPR1O75312 459 aa12.05□□□□□ -0.48
EFCAB11-209ENST00000556005 UQCRFS1P1P0C7P4 283 aa12.05□□□□□ -0.48
EFCAB11-209ENST00000556005 ZAP70P43403 619 aa12.05□□□□□ -0.48
EFCAB11-209ENST00000556005 FAM182BQ5T319 152 aa12.05□□□□□ -0.48
EFCAB11-209ENST00000556005 ZSCAN25Q6NSZ9 544 aa12.05□□□□□ -0.48
EFCAB11-209ENST00000556005 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.05□□□□□ -0.48
EFCAB11-209ENST00000556005 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
EFCAB11-209ENST00000556005 RTCBQ9Y3I0 505 aaKnown RBP12.05□□□□□ -0.48
EFCAB11-209ENST00000556005 SLC5A1P13866 664 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 FGFR2P21802 821 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 RPS6KB1P23443 525 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 MCAMP43121 646 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 SCARF1Q14162 830 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 CCDC102BQ68D86 513 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 CDC5LQ99459 802 aaKnown RBP12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 ZDHHC9Q9Y397 364 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 GNPATO15228 680 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 BRD1O95696 1058 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 CYP21A2P08686 494 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms