RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 SMARCC2Q8TAQ2 1214 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 TCEANC2Q96MN5 208 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 EFCC1Q9HA90 598 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 CWC15Q9P013 229 aaKnown RBP9.06□□□□□ -0.96
CHD8-209ENST00000555935 DNAI1Q9UI46 699 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 CEP170BQ9Y4F5 1589 aaPredicted RBP9.06□□□□□ -0.96
CHD8-209ENST00000555935 NRXN3Q9Y4C0 1643 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 ZRSR1Q15695 479 aaKnown RBP9.06□□□□□ -0.96
CHD8-209ENST00000555935 LRRFIP1Q32MZ4 808 aaKnown RBP9.06□□□□□ -0.96
CHD8-209ENST00000555935 TMC6Q7Z403 805 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 FCHSD1Q86WN1 690 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 FSIP1Q8NA03 581 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 LRRN4CLQ8ND94 238 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 FMN2Q9NZ56 1722 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 RIMS1Q86UR5 1692 aaKnown RBP9.05□□□□□ -0.96
CHD8-209ENST00000555935 RICTORQ6R327 1708 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 A0A0D9SFI3 127 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 NUTM2FA1L443 756 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 ALDH1L1O75891 902 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 SMC2O95347 1197 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 PSME1Q06323 249 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 NUTM2GQ5VZR2 741 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 NEK1Q96PY6 1258 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 FSD1Q9BTV5 496 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 XPO4Q9C0E2 1151 aaKnown RBP9.05□□□□□ -0.96
CHD8-209ENST00000555935 RASSF4Q9H2L5 321 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 PSD3Q9NYI0 1048 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 A0A1W2PQ27 194 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 A0A1W2PQ64 194 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 A0A1W2PQD8 194 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 COL9A3Q14050 684 aaPredicted RBP9.05□□□□□ -0.96
CHD8-209ENST00000555935 IL17REQ8NFR9 667 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 MRPS27Q92552 414 aaKnown RBP9.05□□□□□ -0.96
CHD8-209ENST00000555935 AK7Q96M32 723 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 PTPRUQ92729 1446 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 TOPAZ1Q8N9V7 1692 aa9.05□□□□□ -0.96
CHD8-209ENST00000555935 PI4KAP2A4QPH2 592 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 POLR3GO15318 223 aaPredicted RBP9.04□□□□□ -0.96
CHD8-209ENST00000555935 PFKFB2O60825 505 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 HSP90B1P14625 803 aaKnown RBP9.04□□□□□ -0.96
CHD8-209ENST00000555935 GPR161Q8N6U8 529 aaKnown RBP9.04□□□□□ -0.96
CHD8-209ENST00000555935 PI4KAP1Q8N8J0 262 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 NEK11Q8NG66 645 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 CHMP4CQ96CF2 233 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 DDX11Q96FC9 970 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 IFNKQ9P0W0 207 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 RFX7Q2KHR2 1363 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 TAF5LO75529 589 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 ME1P48163 572 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 AMPHP49418 695 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 CEBPZQ03701 1054 aaKnown RBP9.04□□□□□ -0.96
CHD8-209ENST00000555935 CTR9Q6PD62 1173 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 KRBA2Q6ZNG9 492 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 Q6ZUG5 572 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 FMR1NBQ8N0W7 255 aaPredicted RBP9.04□□□□□ -0.96
CHD8-209ENST00000555935 EXOC4Q96A65 974 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 USP28Q96RU2 1077 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 MPHOSPH8Q99549 860 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 SDF4Q9BRK5 362 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 KIAA1468Q9P260 1216 aa9.04□□□□□ -0.96
CHD8-209ENST00000555935 U3KPZ7 1027 aaPredicted RBP9.04□□□□□ -0.96
CHD8-209ENST00000555935 GOLGA6L9A6NEM1 432 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 ZSCAN12O43309 604 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 TBC1D8O95759 1140 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 HMGB1P09429 215 aaKnown RBP9.03□□□□□ -0.96
CHD8-209ENST00000555935 OAS2P29728 719 aaKnown RBP9.03□□□□□ -0.96
CHD8-209ENST00000555935 SMC1AQ14683 1233 aaKnown RBP9.03□□□□□ -0.96
CHD8-209ENST00000555935 ZSCAN26Q16670 478 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 JAKMIP3Q5VZ66 844 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 ADALQ6DHV7 355 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 CC2D1AQ6P1N0 951 aaPredicted RBP9.03□□□□□ -0.96
CHD8-209ENST00000555935 TRIM65Q6PJ69 517 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 GOLGA5Q8TBA6 731 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 SMARCE1Q969G3 411 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 TAF6LQ9Y6J9 622 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 IKBKBO14920 756 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 CBFA2T2O43439 604 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 TNNT3P45378 269 aaPredicted RBP9.03□□□□□ -0.96
CHD8-209ENST00000555935 EVCP57679 992 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 SCRN1Q12765 414 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 GORABQ5T7V8 394 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 IQUBQ8NA54 791 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 NSUN7Q8NE18 718 aaKnown RBP9.03□□□□□ -0.96
CHD8-209ENST00000555935 NCAPD2Q15021 1401 aa9.03□□□□□ -0.96
CHD8-209ENST00000555935 URI1O94763 535 aaPredicted RBP9.02□□□□□ -0.96
CHD8-209ENST00000555935 HDGFP51858 240 aaKnown RBP9.02□□□□□ -0.96
CHD8-209ENST00000555935 NLRP12P59046 1061 aa9.02□□□□□ -0.96
CHD8-209ENST00000555935 G3BP1Q13283 466 aaKnown RBP eCLIP9.02□□□□□ -0.962e-6■■□□□ 13.6
CHD8-209ENST00000555935 EAF2Q96CJ1 260 aaPredicted RBP9.02□□□□□ -0.96
CHD8-209ENST00000555935 TRERF1Q96PN7 1200 aa9.02□□□□□ -0.96
CHD8-209ENST00000555935 CARD6Q9BX69 1037 aa9.02□□□□□ -0.96
CHD8-209ENST00000555935 ARFGAP3Q9NP61 516 aa9.02□□□□□ -0.96
CHD8-209ENST00000555935 C9orf78Q9NZ63 289 aaPredicted RBP9.02□□□□□ -0.96
CHD8-209ENST00000555935 RTEL1Q9NZ71 1219 aa9.02□□□□□ -0.96
CHD8-209ENST00000555935 CHPF2Q9P2E5 772 aa9.02□□□□□ -0.96
CHD8-209ENST00000555935 PARP3Q9Y6F1 533 aa9.02□□□□□ -0.96
CHD8-209ENST00000555935 ABCC6O95255 1503 aa9.02□□□□□ -0.96
CHD8-209ENST00000555935 MYO1BO43795 1136 aa9.02□□□□□ -0.97
CHD8-209ENST00000555935 EIF4A1P60842 406 aaKnown RBP9.02□□□□□ -0.97
CHD8-209ENST00000555935 ST5P78524 1137 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms