RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 XAGE3Q8WTP9 111 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 KAZALD1Q96I82 304 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 MYD88Q99836 296 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 METTL22Q9BUU2 404 aaPredicted RBP8.32□□□□□ -1.08
TDP1-213ENST00000555880 BOLA2Q9H3K6 86 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 AXIN2Q9Y2T1 843 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 R3HCC1Q9Y3T6 440 aaKnown RBP8.32□□□□□ -1.08
TDP1-213ENST00000555880 PLEKHG2Q9H7P9 1386 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 MED23Q9ULK4 1368 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 A0A0D9SFI3 127 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 FAM205CA6NFA0 338 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 DNM1Q05193 864 aaKnown RBP8.32□□□□□ -1.08
TDP1-213ENST00000555880 UBE2Q2Q8WVN8 375 aa8.32□□□□□ -1.08
TDP1-213ENST00000555880 ALDH8A1Q9H2A2 487 aaPredicted RBP8.32□□□□□ -1.08
TDP1-213ENST00000555880 TLR7Q9NYK1 1049 aaKnown RBP8.32□□□□□ -1.08
TDP1-213ENST00000555880 ALS2Q96Q42 1657 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 ABCC6O95255 1503 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 MST1RQ04912 1400 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 RFX7Q2KHR2 1363 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 GOLGA6L4A6NEF3 574 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 SNRPA1P09661 255 aaKnown RBP8.31□□□□□ -1.08
TDP1-213ENST00000555880 HCLS1P14317 486 aaPredicted RBP8.31□□□□□ -1.08
TDP1-213ENST00000555880 RPS6KB1P23443 525 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 ZC3H6P61129 1189 aaKnown RBP8.31□□□□□ -1.08
TDP1-213ENST00000555880 SLC39A6Q13433 755 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 ANKRD13DQ6ZTN6 518 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 COPS6Q7L5N1 327 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 IFNL2Q8IZJ0 200 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 NECAB1Q8N987 351 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 NFATC2IPQ8NCF5 419 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 HS3ST6Q96QI5 342 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 USP25Q9UHP3 1055 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 TPCN1Q9ULQ1 816 aa8.31□□□□□ -1.08
TDP1-213ENST00000555880 KDM6AO15550 1401 aaPredicted RBP8.3□□□□□ -1.08
TDP1-213ENST00000555880 ELP1O95163 1332 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 ADCY5O95622 1261 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 CCDC192P0DO97 292 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 CSB-PGBD3P0DP91 1061 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 PHKG2P15735 406 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 ATP5JP18859 108 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 ZNF710Q8N1W2 664 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 DDX54Q8TDD1 881 aaKnown RBP8.3□□□□□ -1.08
TDP1-213ENST00000555880 FMNL2Q96PY5 1086 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 SCAND2PQ9GZW5 306 aaPredicted RBP8.3□□□□□ -1.08
TDP1-213ENST00000555880 COPRSQ9NQ92 184 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.3□□□□□ -1.08
TDP1-213ENST00000555880 ARFGEF2Q9Y6D5 1785 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 JCADQ9P266 1359 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 TPM3P06753 285 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 TSGA10IPQ3SY00 556 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 TNNI3KQ59H18 835 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 DNTTIP2Q5QJE6 756 aaKnown RBP8.3□□□□□ -1.08
TDP1-213ENST00000555880 SASS6Q6UVJ0 657 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 ZNF496Q96IT1 587 aaPredicted RBP8.3□□□□□ -1.08
TDP1-213ENST00000555880 DCAF5Q96JK2 942 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 FPGT-TNNI3KV9GXZ4 949 aa8.3□□□□□ -1.08
TDP1-213ENST00000555880 LAMB4A4D0S4 1761 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 COL15A1P39059 1388 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 UQCRHLA0A096LP55 91 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 GOLGA6L6A8MZA4 724 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 KDM4AO75164 1064 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 UQCRHP07919 91 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 HSP90B1P14625 803 aaKnown RBP8.29□□□□□ -1.08
TDP1-213ENST00000555880 PLCB2Q00722 1185 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 MAP3K11Q16584 847 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 DOK7Q18PE1 504 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 GIMAP6Q6P9H5 292 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 UBE3BQ7Z3V4 1068 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 KLHDC4Q8TBB5 520 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 NUP62CLQ9H1M0 184 aa8.29□□□□□ -1.08
TDP1-213ENST00000555880 MEGF6O75095 1541 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 TAF5LO75529 589 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 FGD1P98174 961 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 ST3GAL1Q11201 340 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 TFCP2Q12800 502 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 EPHA10Q5JZY3 1008 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 USPL1Q5W0Q7 1092 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 ZNF589Q86UQ0 364 aaPredicted RBP8.28□□□□□ -1.08
TDP1-213ENST00000555880 FERMT3Q86UX7 667 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 SPATA32Q96LK8 384 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 MAP7D2Q96T17 732 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 DNAJC2Q99543 621 aaKnown RBP8.28□□□□□ -1.08
TDP1-213ENST00000555880 PDCL3Q9H2J4 239 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 DBNLQ9UJU6 430 aaKnown RBP8.28□□□□□ -1.08
TDP1-213ENST00000555880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.28□□□□□ -1.08
TDP1-213ENST00000555880 PKD1L3Q7Z443 1732 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 A0A087WZG4 1122 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 H3BQV1 296 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 DYNC1I1O14576 645 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 HMGB1P09429 215 aaKnown RBP8.28□□□□□ -1.08
TDP1-213ENST00000555880 CABP4P57796 275 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 STK3Q13188 491 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 TOB2Q14106 344 aaPredicted RBP8.28□□□□□ -1.08
TDP1-213ENST00000555880 RABL6Q3YEC7 729 aaPredicted RBP8.28□□□□□ -1.08
TDP1-213ENST00000555880 IFFO2Q5TF58 517 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 PIBF1Q8WXW3 757 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 NEK1Q96PY6 1258 aa8.28□□□□□ -1.08
TDP1-213ENST00000555880 DDX19AQ9NUU7 478 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms