RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 PPM1GO15355 546 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-214ENST00000555867 IPO8O15397 1037 aaKnown RBP8.23□□□□□ -1.09
PSEN1-214ENST00000555867 EYA1Q99502 592 aa8.23□□□□□ -1.09
PSEN1-214ENST00000555867 ATG3Q9NT62 314 aa8.23□□□□□ -1.09
PSEN1-214ENST00000555867 IFT57Q9NWB7 429 aa8.23□□□□□ -1.09
PSEN1-214ENST00000555867 PCDHB3Q9Y5E6 796 aa8.23□□□□□ -1.09
PSEN1-214ENST00000555867 EMILIN1Q9Y6C2 1016 aa8.23□□□□□ -1.09
PSEN1-214ENST00000555867 TNRC18O15417 2968 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-214ENST00000555867 RTL1A6NKG5 1358 aa8.22□□□□□ -1.09
PSEN1-214ENST00000555867 NFKBIEO00221 500 aa8.22□□□□□ -1.09
PSEN1-214ENST00000555867 RRS1Q15050 365 aaKnown RBP8.22□□□□□ -1.09
PSEN1-214ENST00000555867 FTSJ3Q8IY81 847 aaKnown RBP8.22□□□□□ -1.09
PSEN1-214ENST00000555867 SRP68Q9UHB9 627 aaKnown RBP8.22□□□□□ -1.09
PSEN1-214ENST00000555867 RFC4P35249 363 aa8.21□□□□□ -1.1
PSEN1-214ENST00000555867 PAXIP1Q6ZW49 1069 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-214ENST00000555867 ERICH6Q7L0X2 663 aa8.21□□□□□ -1.1
PSEN1-214ENST00000555867 DZIP1LQ8IYY4 767 aaKnown RBP8.21□□□□□ -1.1
PSEN1-214ENST00000555867 FRAT1Q92837 279 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-214ENST00000555867 CFAP44Q96MT7 982 aa8.21□□□□□ -1.1
PSEN1-214ENST00000555867 SMC4Q9NTJ3 1288 aa8.21□□□□□ -1.1
PSEN1-214ENST00000555867 DDX19BQ9UMR2 479 aa8.21□□□□□ -1.1
PSEN1-214ENST00000555867 TMEM88BA6NKF7 163 aa8.2□□□□□ -1.1
PSEN1-214ENST00000555867 RPS6KA4O75676 772 aa8.2□□□□□ -1.1
PSEN1-214ENST00000555867 EXOSC9Q06265 439 aaKnown RBP8.2□□□□□ -1.1
PSEN1-214ENST00000555867 MVPQ14764 893 aaKnown RBP8.2□□□□□ -1.1
PSEN1-214ENST00000555867 HSP90AB2PQ58FF8 381 aa8.2□□□□□ -1.1
PSEN1-214ENST00000555867 RC3H1Q5TC82 1133 aaKnown RBP8.2□□□□□ -1.1
PSEN1-214ENST00000555867 ATF7IPQ6VMQ6 1270 aa8.2□□□□□ -1.1
PSEN1-214ENST00000555867 ARHGAP45Q92619 1136 aa8.2□□□□□ -1.1
PSEN1-214ENST00000555867 BACH2Q9BYV9 841 aa8.2□□□□□ -1.1
PSEN1-214ENST00000555867 KDRP35968 1356 aa8.2□□□□□ -1.1
PSEN1-214ENST00000555867 TIAM2Q8IVF5 1701 aa8.2□□□□□ -1.1
PSEN1-214ENST00000555867 POLRMTO00411 1230 aaKnown RBP8.19□□□□□ -1.1
PSEN1-214ENST00000555867 DDNO94850 711 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-214ENST00000555867 ZNF853P0CG23 659 aa8.19□□□□□ -1.1
PSEN1-214ENST00000555867 SLC19A1P41440 591 aa8.19□□□□□ -1.1
PSEN1-214ENST00000555867 EIF4A2Q14240 407 aaKnown RBP8.19□□□□□ -1.1
PSEN1-214ENST00000555867 BLOC1S3Q6QNY0 202 aa8.19□□□□□ -1.1
PSEN1-214ENST00000555867 RWDD1Q9H446 243 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-214ENST00000555867 TMOD3Q9NYL9 352 aa8.19□□□□□ -1.1
PSEN1-214ENST00000555867 COG6Q9Y2V7 657 aa8.19□□□□□ -1.1
PSEN1-214ENST00000555867 WDR33Q9C0J8 1336 aaKnown RBP8.19□□□□□ -1.1
PSEN1-214ENST00000555867 DICER1Q9UPY3 1922 aaKnown RBP8.19□□□□□ -1.1
PSEN1-214ENST00000555867 RASSF10A6NK89 507 aa8.18□□□□□ -1.1
PSEN1-214ENST00000555867 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
PSEN1-214ENST00000555867 HMOX1P09601 288 aa8.18□□□□□ -1.1
PSEN1-214ENST00000555867 DNAJB2P25686 324 aa8.18□□□□□ -1.1
PSEN1-214ENST00000555867 TM4SF1P30408 202 aa8.18□□□□□ -1.1
PSEN1-214ENST00000555867 MAP2K1Q02750 393 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-214ENST00000555867 PANK1Q8TE04 598 aa8.18□□□□□ -1.1
PSEN1-214ENST00000555867 TSR2Q969E8 191 aaKnown RBP8.18□□□□□ -1.1
PSEN1-214ENST00000555867 DDRGK1Q96HY6 314 aa8.18□□□□□ -1.1
PSEN1-214ENST00000555867 ANP32EQ9BTT0 268 aa8.18□□□□□ -1.1
PSEN1-214ENST00000555867 CNTNAP4Q9C0A0 1308 aa8.18□□□□□ -1.1
PSEN1-214ENST00000555867 HTATSF1O43719 755 aaKnown RBP8.17□□□□□ -1.1
PSEN1-214ENST00000555867 DEFB115Q30KQ5 88 aa8.17□□□□□ -1.1
PSEN1-214ENST00000555867 ERFEQ4G0M1 354 aa8.17□□□□□ -1.1
PSEN1-214ENST00000555867 TRIM67Q6ZTA4 783 aa8.17□□□□□ -1.1
PSEN1-214ENST00000555867 TTLL6Q8N841 843 aa8.17□□□□□ -1.1
PSEN1-214ENST00000555867 SSH1Q8WYL5 1049 aa8.17□□□□□ -1.1
PSEN1-214ENST00000555867 IPO9Q96P70 1041 aaKnown RBP8.17□□□□□ -1.1
PSEN1-214ENST00000555867 MCOLN1Q9GZU1 580 aa8.17□□□□□ -1.1
PSEN1-214ENST00000555867 SOS1Q07889 1333 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-214ENST00000555867 USP42Q9H9J4 1324 aaKnown RBP8.17□□□□□ -1.1
PSEN1-214ENST00000555867 AFDNP55196 1824 aaKnown RBP8.17□□□□□ -1.1
PSEN1-214ENST00000555867 TRIM27P14373 513 aa8.16□□□□□ -1.1
PSEN1-214ENST00000555867 COL5A3P25940 1745 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-214ENST00000555867 KMT5BQ4FZB7 885 aa8.16□□□□□ -1.1
PSEN1-214ENST00000555867 LDHDQ86WU2 507 aa8.16□□□□□ -1.1
PSEN1-214ENST00000555867 ANKLE1Q8NAG6 615 aa8.16□□□□□ -1.1
PSEN1-214ENST00000555867 GAS2L2Q8NHY3 880 aa8.16□□□□□ -1.1
PSEN1-214ENST00000555867 PHACTR3Q96KR7 559 aa8.16□□□□□ -1.1
PSEN1-214ENST00000555867 TAF1DQ9H5J8 278 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-214ENST00000555867 DGAT1O75907 488 aa8.15□□□□□ -1.1
PSEN1-214ENST00000555867 FMR1Q06787 632 aaKnown RBP eCLIP8.15□□□□□ -1.1
PSEN1-214ENST00000555867 HDAC1Q13547 482 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-214ENST00000555867 PKDCCQ504Y2 493 aa8.15□□□□□ -1.1
PSEN1-214ENST00000555867 SPRYD7Q5W111 196 aa8.15□□□□□ -1.1
PSEN1-214ENST00000555867 SULT6B1Q6IMI4 303 aa8.15□□□□□ -1.1
PSEN1-214ENST00000555867 ZNF598Q86UK7 904 aaKnown RBP8.15□□□□□ -1.1
PSEN1-214ENST00000555867 ZNF775Q96BV0 537 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-214ENST00000555867 BCL2L13Q9BXK5 485 aa8.15□□□□□ -1.1
PSEN1-214ENST00000555867 API5Q9BZZ5 524 aaKnown RBP8.15□□□□□ -1.1
PSEN1-214ENST00000555867 TMEM134Q9H6X4 195 aa8.15□□□□□ -1.1
PSEN1-214ENST00000555867 NOP58Q9Y2X3 529 aaKnown RBP8.15□□□□□ -1.1
PSEN1-214ENST00000555867 CUL9Q8IWT3 2517 aa8.15□□□□□ -1.1
PSEN1-214ENST00000555867 FER1L6Q2WGJ9 1857 aa8.15□□□□□ -1.11
PSEN1-214ENST00000555867 ACTN4O43707 911 aaKnown RBP8.14□□□□□ -1.11
PSEN1-214ENST00000555867 TLL1O43897 1013 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 VAMP4O75379 141 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 RLBP1P12271 317 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 PHKG2P15735 406 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 CRKLP46109 303 aaKnown RBP8.14□□□□□ -1.11
PSEN1-214ENST00000555867 PRR20EP86478 221 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 PRR20CP86479 221 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 PRR20DP86480 221 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 PRR20BP86481 221 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 PRR20AP86496 221 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 PTGDRQ13258 359 aa8.14□□□□□ -1.11
PSEN1-214ENST00000555867 NFIXQ14938 502 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms