RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 TOMM70O94826 608 aa28.71■■■□□ 2.19
CDKN3-208ENST00000555837 UBTFL1P0CB47 393 aaPredicted RBP28.71■■■□□ 2.19
CDKN3-208ENST00000555837 MS4A1P11836 297 aa28.71■■■□□ 2.19
CDKN3-208ENST00000555837 INTS3Q68E01 1043 aaKnown RBP28.71■■■□□ 2.19
CDKN3-208ENST00000555837 TBC1D16Q8TBP0 767 aa28.71■■■□□ 2.19
CDKN3-208ENST00000555837 USP44Q9H0E7 712 aa28.71■■■□□ 2.19
CDKN3-208ENST00000555837 UFL1O94874 794 aa28.7■■■□□ 2.18
CDKN3-208ENST00000555837 GNAI3P08754 354 aa28.7■■■□□ 2.18
CDKN3-208ENST00000555837 TNIP1Q15025 636 aa28.7■■■□□ 2.18
CDKN3-208ENST00000555837 RRAGCQ9HB90 399 aa28.7■■■□□ 2.18
CDKN3-208ENST00000555837 NMRK2Q9NPI5 230 aa28.7■■■□□ 2.18
CDKN3-208ENST00000555837 MINPP1Q9UNW1 487 aa28.7■■■□□ 2.18
CDKN3-208ENST00000555837 LEMD3Q9Y2U8 911 aa28.7■■■□□ 2.18
CDKN3-208ENST00000555837 BCAR3O75815 825 aa28.69■■■□□ 2.18
CDKN3-208ENST00000555837 KIF3CO14782 793 aa28.68■■■□□ 2.18
CDKN3-208ENST00000555837 FTSJ3Q8IY81 847 aaKnown RBP28.68■■■□□ 2.18
CDKN3-208ENST00000555837 SUCLG2Q96I99 432 aa28.68■■■□□ 2.18
CDKN3-208ENST00000555837 L3MBTL3Q96JM7 780 aaPredicted RBP28.68■■■□□ 2.18
CDKN3-208ENST00000555837 DDNO94850 711 aaPredicted RBP28.67■■■□□ 2.18
CDKN3-208ENST00000555837 RABL6Q3YEC7 729 aaPredicted RBP28.67■■■□□ 2.18
CDKN3-208ENST00000555837 LDHAL6AQ6ZMR3 332 aa28.67■■■□□ 2.18
CDKN3-208ENST00000555837 POLLQ9UGP5 575 aa28.67■■■□□ 2.18
CDKN3-208ENST00000555837 TRIM27P14373 513 aa28.66■■■□□ 2.18
CDKN3-208ENST00000555837 LMOD1P29536 600 aaPredicted RBP28.66■■■□□ 2.18
CDKN3-208ENST00000555837 KCNJ4P48050 445 aa28.66■■■□□ 2.18
CDKN3-208ENST00000555837 C1QTNF8P60827 252 aa28.66■■■□□ 2.18
CDKN3-208ENST00000555837 CNNM1Q9NRU3 951 aa28.66■■■□□ 2.18
CDKN3-208ENST00000555837 WDR90Q96KV7 1748 aa28.66■■■□□ 2.18
CDKN3-208ENST00000555837 BICC1Q9H694 974 aaKnown RBP28.65■■■□□ 2.18
CDKN3-208ENST00000555837 EPHA10Q5JZY3 1008 aa28.64■■■□□ 2.18
CDKN3-208ENST00000555837 RBM46Q8TBY0 533 aaKnown RBP28.64■■■□□ 2.18
CDKN3-208ENST00000555837 RIMBP2O15034 1052 aa28.63■■■□□ 2.17
CDKN3-208ENST00000555837 CIAPIN1Q6FI81 312 aa28.63■■■□□ 2.17
CDKN3-208ENST00000555837 HACL1Q9UJ83 578 aa28.63■■■□□ 2.17
CDKN3-208ENST00000555837 GJA3Q9Y6H8 435 aa28.63■■■□□ 2.17
CDKN3-208ENST00000555837 PNMA8AQ86V59 439 aaPredicted RBP28.62■■■□□ 2.17
CDKN3-208ENST00000555837 ZNF541Q9H0D2 1346 aa28.62■■■□□ 2.17
CDKN3-208ENST00000555837 CHRNDQ07001 517 aa28.61■■■□□ 2.17
CDKN3-208ENST00000555837 FSTL1Q12841 308 aa28.61■■■□□ 2.17
CDKN3-208ENST00000555837 PODNQ7Z5L7 613 aa28.61■■■□□ 2.17
CDKN3-208ENST00000555837 DZIP1LQ8IYY4 767 aaKnown RBP28.61■■■□□ 2.17
CDKN3-208ENST00000555837 KAZALD1Q96I82 304 aa28.61■■■□□ 2.17
CDKN3-208ENST00000555837 DUOX1Q9NRD9 1551 aa28.61■■■□□ 2.17
CDKN3-208ENST00000555837 MED23Q9ULK4 1368 aa28.61■■■□□ 2.17
CDKN3-208ENST00000555837 SCN4AP35499 1836 aa28.6■■■□□ 2.17
CDKN3-208ENST00000555837 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.6■■■□□ 2.17
CDKN3-208ENST00000555837 SMC1BQ8NDV3 1235 aa28.6■■■□□ 2.17
CDKN3-208ENST00000555837 ZNF804BA4D1E1 1349 aa28.6■■■□□ 2.17
CDKN3-208ENST00000555837 MROH5Q6ZUA9 1318 aa28.6■■■□□ 2.17
CDKN3-208ENST00000555837 ECE2O60344 883 aa28.59■■■□□ 2.17
CDKN3-208ENST00000555837 CXCL9Q07325 125 aa28.59■■■□□ 2.17
CDKN3-208ENST00000555837 FBXO3Q9UK99 471 aa28.59■■■□□ 2.17
CDKN3-208ENST00000555837 LTBP1Q14766 1721 aa28.59■■■□□ 2.17
CDKN3-208ENST00000555837 SLC51AQ86UW1 340 aa28.58■■■□□ 2.17
CDKN3-208ENST00000555837 CLUAP1Q96AJ1 413 aa28.58■■■□□ 2.17
CDKN3-208ENST00000555837 RCAN3Q9UKA8 241 aa28.58■■■□□ 2.17
CDKN3-208ENST00000555837 ANKRD44Q8N8A2 993 aa28.57■■■□□ 2.16
CDKN3-208ENST00000555837 CHMP4BQ9H444 224 aaKnown RBP28.57■■■□□ 2.16
CDKN3-208ENST00000555837 DBNDD1Q9H9R9 158 aa28.57■■■□□ 2.16
CDKN3-208ENST00000555837 COL4A1P02462 1669 aa28.56■■■□□ 2.16
CDKN3-208ENST00000555837 RPS12P25398 132 aaKnown RBP28.56■■■□□ 2.16
CDKN3-208ENST00000555837 SPEF2Q9C093 1822 aa28.56■■■□□ 2.16
CDKN3-208ENST00000555837 COA1Q9GZY4 146 aa28.56■■■□□ 2.16
CDKN3-208ENST00000555837 GNAI2P04899 355 aa28.55■■■□□ 2.16
CDKN3-208ENST00000555837 TAF1DQ9H5J8 278 aaPredicted RBP28.55■■■□□ 2.16
CDKN3-208ENST00000555837 RAD17O75943 681 aa28.54■■■□□ 2.16
CDKN3-208ENST00000555837 EPHX2P34913 555 aa28.54■■■□□ 2.16
CDKN3-208ENST00000555837 DOK7Q18PE1 504 aa28.54■■■□□ 2.16
CDKN3-208ENST00000555837 ZNF594Q96JF6 807 aaPredicted RBP28.54■■■□□ 2.16
CDKN3-208ENST00000555837 MEIS3Q99687 375 aa28.54■■■□□ 2.16
CDKN3-208ENST00000555837 LRRFIP2Q9Y608 721 aaKnown RBP28.54■■■□□ 2.16
CDKN3-208ENST00000555837 UBE4AQ14139 1066 aa28.53■■■□□ 2.16
CDKN3-208ENST00000555837 C15orf52Q6ZUT6 534 aaKnown RBP28.53■■■□□ 2.16
CDKN3-208ENST00000555837 DPF2Q92785 391 aa28.53■■■□□ 2.16
CDKN3-208ENST00000555837 COL4A5P29400 1685 aa28.53■■■□□ 2.16
CDKN3-208ENST00000555837 POTECB2RU33 542 aa28.52■■■□□ 2.16
CDKN3-208ENST00000555837 ZNF804AQ7Z570 1209 aa28.52■■■□□ 2.16
CDKN3-208ENST00000555837 LDHDQ86WU2 507 aa28.52■■■□□ 2.16
CDKN3-208ENST00000555837 TMEM57Q8N5G2 664 aa28.52■■■□□ 2.16
CDKN3-208ENST00000555837 H7C1D1 291 aa28.51■■■□□ 2.15
CDKN3-208ENST00000555837 MMP14P50281 582 aa28.51■■■□□ 2.15
CDKN3-208ENST00000555837 USP50Q70EL3 339 aaPredicted RBP28.51■■■□□ 2.15
CDKN3-208ENST00000555837 ITPRIPQ8IWB1 547 aa28.51■■■□□ 2.15
CDKN3-208ENST00000555837 GPRC5DQ9NZD1 345 aa28.51■■■□□ 2.15
CDKN3-208ENST00000555837 YDJCA8MPS7 323 aa28.5■■■□□ 2.15
CDKN3-208ENST00000555837 PLIN1O60240 522 aa28.5■■■□□ 2.15
CDKN3-208ENST00000555837 METTL24Q5JXM2 366 aa28.5■■■□□ 2.15
CDKN3-208ENST00000555837 ADARB2Q9NS39 739 aaKnown RBP28.5■■■□□ 2.15
CDKN3-208ENST00000555837 RIPOR2Q9Y4F9 1068 aa28.5■■■□□ 2.15
CDKN3-208ENST00000555837 USP17L3A6NCW0 530 aa28.49■■■□□ 2.15
CDKN3-208ENST00000555837 USP17L4A6NCW7 530 aa28.49■■■□□ 2.15
CDKN3-208ENST00000555837 USP17L1Q7RTZ2 530 aa28.49■■■□□ 2.15
CDKN3-208ENST00000555837 GPR101Q96P66 508 aaPredicted RBP28.49■■■□□ 2.15
CDKN3-208ENST00000555837 MYO3BQ8WXR4 1341 aa28.48■■■□□ 2.15
CDKN3-208ENST00000555837 EYA2O00167 538 aa28.48■■■□□ 2.15
CDKN3-208ENST00000555837 PSMD14O00487 310 aa28.48■■■□□ 2.15
CDKN3-208ENST00000555837 TAF5LO75529 589 aa28.48■■■□□ 2.15
CDKN3-208ENST00000555837 GMPSP49915 693 aaPredicted RBP28.48■■■□□ 2.15
CDKN3-208ENST00000555837 SCNN1DP51172 638 aa28.48■■■□□ 2.15
CDKN3-208ENST00000555837 MTX1Q13505 466 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms