RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 PDE1AP54750 535 aa11.83□□□□□ -0.52
SIX1-204ENST00000555627 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
SIX1-204ENST00000555627 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
SIX1-204ENST00000555627 ABHD8Q96I13 439 aa11.83□□□□□ -0.52
SIX1-204ENST00000555627 ZNF594Q96JF6 807 aaPredicted RBP11.83□□□□□ -0.52
SIX1-204ENST00000555627 TLR7Q9NYK1 1049 aaKnown RBP11.83□□□□□ -0.52
SIX1-204ENST00000555627 PDE4DIPQ5VU43 2346 aa11.83□□□□□ -0.52
SIX1-204ENST00000555627 PNPLA7Q6ZV29 1317 aa11.83□□□□□ -0.52
SIX1-204ENST00000555627 HCLS1P14317 486 aaPredicted RBP11.82□□□□□ -0.52
SIX1-204ENST00000555627 MX1P20591 662 aa11.82□□□□□ -0.52
SIX1-204ENST00000555627 RGS19P49795 217 aa11.82□□□□□ -0.52
SIX1-204ENST00000555627 NFIXQ14938 502 aa11.82□□□□□ -0.52
SIX1-204ENST00000555627 ERFEQ4G0M1 354 aa11.82□□□□□ -0.52
SIX1-204ENST00000555627 ERC1Q8IUD2 1116 aa11.82□□□□□ -0.52
SIX1-204ENST00000555627 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
SIX1-204ENST00000555627 TNRC18O15417 2968 aaPredicted RBP11.82□□□□□ -0.52
SIX1-204ENST00000555627 FAM177BA6PVY3 158 aa11.81□□□□□ -0.52
SIX1-204ENST00000555627 CIAO1O76071 339 aa11.81□□□□□ -0.52
SIX1-204ENST00000555627 DDR1Q08345 913 aa11.81□□□□□ -0.52
SIX1-204ENST00000555627 LRRC24Q50LG9 513 aa11.81□□□□□ -0.52
SIX1-204ENST00000555627 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
SIX1-204ENST00000555627 EAF2Q96CJ1 260 aaPredicted RBP11.81□□□□□ -0.52
SIX1-204ENST00000555627 CCDC85AQ96PX6 553 aaPredicted RBP11.81□□□□□ -0.52
SIX1-204ENST00000555627 PUS3Q9BZE2 481 aaKnown RBP11.81□□□□□ -0.52
SIX1-204ENST00000555627 PRDM10Q9NQV6 1147 aa11.81□□□□□ -0.52
SIX1-204ENST00000555627 CHMP3Q9Y3E7 222 aa11.81□□□□□ -0.52
SIX1-204ENST00000555627 DUOX1Q9NRD9 1551 aa11.8□□□□□ -0.52
SIX1-204ENST00000555627 EYA2O00167 538 aa11.8□□□□□ -0.52
SIX1-204ENST00000555627 ZPR1O75312 459 aa11.8□□□□□ -0.52
SIX1-204ENST00000555627 ITGA6P23229 1130 aa11.8□□□□□ -0.52
SIX1-204ENST00000555627 RFC4P35249 363 aa11.8□□□□□ -0.52
SIX1-204ENST00000555627 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
SIX1-204ENST00000555627 VGLL2Q8N8G2 317 aa11.8□□□□□ -0.52
SIX1-204ENST00000555627 LAMA4Q16363 1823 aa11.8□□□□□ -0.52
SIX1-204ENST00000555627 SEC24BO95487 1268 aa11.79□□□□□ -0.52
SIX1-204ENST00000555627 TFCP2Q12800 502 aa11.79□□□□□ -0.52
SIX1-204ENST00000555627 G3BP1Q13283 466 aaKnown RBP eCLIP11.79□□□□□ -0.52
SIX1-204ENST00000555627 TNNI3KQ59H18 835 aa11.79□□□□□ -0.52
SIX1-204ENST00000555627 SLC10A5Q5PT55 438 aa11.79□□□□□ -0.52
SIX1-204ENST00000555627 BICDL1Q6ZP65 573 aa11.79□□□□□ -0.52
SIX1-204ENST00000555627 COL23A1Q86Y22 540 aaPredicted RBP11.79□□□□□ -0.52
SIX1-204ENST00000555627 DBNLQ9UJU6 430 aaKnown RBP11.79□□□□□ -0.52
SIX1-204ENST00000555627 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
SIX1-204ENST00000555627 FPGT-TNNI3KV9GXZ4 949 aa11.79□□□□□ -0.52
SIX1-204ENST00000555627 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
SIX1-204ENST00000555627 FOXN1O15353 648 aa11.78□□□□□ -0.52
SIX1-204ENST00000555627 SDSP20132 328 aa11.78□□□□□ -0.52
SIX1-204ENST00000555627 TM4SF1P30408 202 aa11.78□□□□□ -0.52
SIX1-204ENST00000555627 IL15P40933 162 aaPredicted RBP11.78□□□□□ -0.52
SIX1-204ENST00000555627 SF3B3Q15393 1217 aaKnown RBP11.78□□□□□ -0.52
SIX1-204ENST00000555627 AACSQ86V21 672 aa11.78□□□□□ -0.52
SIX1-204ENST00000555627 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
SIX1-204ENST00000555627 RBM19Q9Y4C8 960 aaKnown RBP11.78□□□□□ -0.52
SIX1-204ENST00000555627 TTC41PQ6P2S7 1318 aa11.78□□□□□ -0.52
SIX1-204ENST00000555627 IFIT5Q13325 482 aaKnown RBP11.77□□□□□ -0.53
SIX1-204ENST00000555627 CCDC57Q2TAC2 916 aa11.77□□□□□ -0.53
SIX1-204ENST00000555627 PRR5LQ6MZQ0 368 aa11.77□□□□□ -0.53
SIX1-204ENST00000555627 TBC1D9Q6ZT07 1266 aa11.77□□□□□ -0.53
SIX1-204ENST00000555627 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
SIX1-204ENST00000555627 SETDB2Q96T68 719 aa11.77□□□□□ -0.53
SIX1-204ENST00000555627 NYXQ9GZU5 481 aa11.77□□□□□ -0.53
SIX1-204ENST00000555627 GPR108Q9NPR9 543 aa11.77□□□□□ -0.53
SIX1-204ENST00000555627 RIPOR2Q9Y4F9 1068 aa11.77□□□□□ -0.53
SIX1-204ENST00000555627 PSME4Q14997 1843 aa11.76□□□□□ -0.53
SIX1-204ENST00000555627 SLX4Q8IY92 1834 aa11.76□□□□□ -0.53
SIX1-204ENST00000555627 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
SIX1-204ENST00000555627 ANKRD18BA2A2Z9 1011 aa11.76□□□□□ -0.53
SIX1-204ENST00000555627 SLC51AQ86UW1 340 aa11.76□□□□□ -0.53
SIX1-204ENST00000555627 NBPF5PQ86XG9 351 aaPredicted RBP11.76□□□□□ -0.53
SIX1-204ENST00000555627 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
SIX1-204ENST00000555627 DBNDD2Q9BQY9 259 aa11.76□□□□□ -0.53
SIX1-204ENST00000555627 CCDC8Q9H0W5 538 aaPredicted RBP11.76□□□□□ -0.53
SIX1-204ENST00000555627 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
SIX1-204ENST00000555627 COL1A1P02452 1464 aaPredicted RBP11.76□□□□□ -0.53
SIX1-204ENST00000555627 CDK5RAP2Q96SN8 1893 aa11.75□□□□□ -0.53
SIX1-204ENST00000555627 CDC45O75419 566 aa11.75□□□□□ -0.53
SIX1-204ENST00000555627 CCDC152Q4G0S7 254 aa11.75□□□□□ -0.53
SIX1-204ENST00000555627 CNBD1Q8NA66 436 aa11.75□□□□□ -0.53
SIX1-204ENST00000555627 BCL11AQ9H165 835 aa11.75□□□□□ -0.53
SIX1-204ENST00000555627 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
SIX1-204ENST00000555627 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
SIX1-204ENST00000555627 C10orf71Q711Q0 1435 aa11.75□□□□□ -0.53
SIX1-204ENST00000555627 CCDC85CA6NKD9 419 aa11.74□□□□□ -0.53
SIX1-204ENST00000555627 ADORA1P30542 326 aa11.74□□□□□ -0.53
SIX1-204ENST00000555627 ECHDC1Q9NTX5 307 aa11.74□□□□□ -0.53
SIX1-204ENST00000555627 RFX7Q2KHR2 1363 aa11.74□□□□□ -0.53
SIX1-204ENST00000555627 A0A1B0GUL7 405 aa11.73□□□□□ -0.53
SIX1-204ENST00000555627 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
SIX1-204ENST00000555627 IFIT2P09913 472 aaKnown RBP11.73□□□□□ -0.53
SIX1-204ENST00000555627 HSP90B1P14625 803 aaKnown RBP11.73□□□□□ -0.53
SIX1-204ENST00000555627 FGFR2P21802 821 aa11.73□□□□□ -0.53
SIX1-204ENST00000555627 HMGB2P26583 209 aaKnown RBP11.73□□□□□ -0.53
SIX1-204ENST00000555627 CRY2Q49AN0 593 aa11.73□□□□□ -0.53
SIX1-204ENST00000555627 TAF7LQ5H9L4 462 aa11.73□□□□□ -0.53
SIX1-204ENST00000555627 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
SIX1-204ENST00000555627 IL25Q9H293 177 aa11.73□□□□□ -0.53
SIX1-204ENST00000555627 LAMB1P07942 1786 aa11.72□□□□□ -0.53
SIX1-204ENST00000555627 SERPINB2P05120 415 aa11.72□□□□□ -0.53
SIX1-204ENST00000555627 LDHAL6AQ6ZMR3 332 aa11.72□□□□□ -0.53
SIX1-204ENST00000555627 SMC1BQ8NDV3 1235 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms