RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 KLK14Q9P0G3 267 aa8.03□□□□□ -1.12
SRP54-207ENST00000555535 ANGEL1Q9UNK9 670 aaKnown RBP8.03□□□□□ -1.12
SRP54-207ENST00000555535 HMX2A2RU54 273 aa8.02□□□□□ -1.13
SRP54-207ENST00000555535 J3QW42 95 aa8.02□□□□□ -1.13
SRP54-207ENST00000555535 XYLBO75191 536 aa8.01□□□□□ -1.13
SRP54-207ENST00000555535 DGKZQ13574 1117 aa8.01□□□□□ -1.13
SRP54-207ENST00000555535 SHKBP1Q8TBC3 707 aa8.01□□□□□ -1.13
SRP54-207ENST00000555535 RTCBQ9Y3I0 505 aaKnown RBP8.01□□□□□ -1.13
SRP54-207ENST00000555535 C8AP07357 584 aa8□□□□□ -1.13
SRP54-207ENST00000555535 RASA1P20936 1047 aa8□□□□□ -1.13
SRP54-207ENST00000555535 C11orf91Q3C1V1 193 aa8□□□□□ -1.13
SRP54-207ENST00000555535 FAM20CQ8IXL6 584 aa8□□□□□ -1.13
SRP54-207ENST00000555535 KLHL23Q8NBE8 558 aa8□□□□□ -1.13
SRP54-207ENST00000555535 NSUN5Q96P11 429 aaKnown RBP8□□□□□ -1.13
SRP54-207ENST00000555535 HINFPQ9BQA5 517 aa8□□□□□ -1.13
SRP54-207ENST00000555535 KRTAP4-2Q9BYR5 136 aa8□□□□□ -1.13
SRP54-207ENST00000555535 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8□□□□□ -1.13
SRP54-207ENST00000555535 HIF3AQ9Y2N7 669 aa8□□□□□ -1.13
SRP54-207ENST00000555535 SART1O43290 800 aaKnown RBP7.99□□□□□ -1.13
SRP54-207ENST00000555535 CPSF6Q16630 551 aaKnown RBP eCLIP7.99□□□□□ -1.13
SRP54-207ENST00000555535 FAM117BQ6P1L5 589 aa7.99□□□□□ -1.13
SRP54-207ENST00000555535 ABI1Q8IZP0 508 aa7.99□□□□□ -1.13
SRP54-207ENST00000555535 PIM2Q9P1W9 311 aa7.99□□□□□ -1.13
SRP54-207ENST00000555535 TRIM33Q9UPN9 1127 aa7.99□□□□□ -1.13
SRP54-207ENST00000555535 MMP20O60882 483 aa7.98□□□□□ -1.13
SRP54-207ENST00000555535 JUNBP17275 347 aaPredicted RBP7.98□□□□□ -1.13
SRP54-207ENST00000555535 DUOXA2Q1HG44 320 aa7.98□□□□□ -1.13
SRP54-207ENST00000555535 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.98□□□□□ -1.13
SRP54-207ENST00000555535 GALNT11Q8NCW6 608 aa7.98□□□□□ -1.13
SRP54-207ENST00000555535 MYO19Q96H55 970 aa7.98□□□□□ -1.13
SRP54-207ENST00000555535 FBXL18Q96ME1 805 aa7.98□□□□□ -1.13
SRP54-207ENST00000555535 WISP1O95388 367 aa7.97□□□□□ -1.13
SRP54-207ENST00000555535 ANKRD34AQ69YU3 496 aa7.97□□□□□ -1.13
SRP54-207ENST00000555535 BEND4Q6ZU67 534 aa7.97□□□□□ -1.13
SRP54-207ENST00000555535 VTI1AQ96AJ9 217 aa7.97□□□□□ -1.13
SRP54-207ENST00000555535 KCNF1Q9H3M0 494 aa7.97□□□□□ -1.13
SRP54-207ENST00000555535 LINC01387J3KSC0 135 aa7.96□□□□□ -1.14
SRP54-207ENST00000555535 OPLAHO14841 1288 aa7.96□□□□□ -1.14
SRP54-207ENST00000555535 KIAA1211Q6ZU35 1233 aa7.96□□□□□ -1.14
SRP54-207ENST00000555535 CBLL1Q75N03 491 aa7.96□□□□□ -1.14
SRP54-207ENST00000555535 WDR64B1ANS9 1081 aa7.95□□□□□ -1.14
SRP54-207ENST00000555535 FOXO3O43524 673 aa7.95□□□□□ -1.14
SRP54-207ENST00000555535 RAD21O60216 631 aa7.95□□□□□ -1.14
SRP54-207ENST00000555535 SMNDC1O75940 238 aaKnown RBP eCLIP7.95□□□□□ -1.14
SRP54-207ENST00000555535 BMP3P12645 472 aa7.95□□□□□ -1.14
SRP54-207ENST00000555535 CDC27P30260 824 aa7.95□□□□□ -1.14
SRP54-207ENST00000555535 LARP1Q6PKG0 1096 aaKnown RBP7.95□□□□□ -1.14
SRP54-207ENST00000555535 CMTR1Q8N1G2 835 aaKnown RBP7.95□□□□□ -1.14
SRP54-207ENST00000555535 SPACA7Q96KW9 195 aa7.95□□□□□ -1.14
SRP54-207ENST00000555535 UCN2Q96RP3 112 aa7.95□□□□□ -1.14
SRP54-207ENST00000555535 QTRT2Q9H974 415 aaKnown RBP7.95□□□□□ -1.14
SRP54-207ENST00000555535 ATG3Q9NT62 314 aa7.95□□□□□ -1.14
SRP54-207ENST00000555535 LEMD3Q9Y2U8 911 aa7.95□□□□□ -1.14
SRP54-207ENST00000555535 FAM177BA6PVY3 158 aa7.94□□□□□ -1.14
SRP54-207ENST00000555535 PRNPP04156 253 aa7.94□□□□□ -1.14
SRP54-207ENST00000555535 RGL4Q8IZJ4 473 aa7.94□□□□□ -1.14
SRP54-207ENST00000555535 FSCN2O14926 492 aa7.93□□□□□ -1.14
SRP54-207ENST00000555535 HDGFL1Q5TGJ6 251 aa7.93□□□□□ -1.14
SRP54-207ENST00000555535 VSIG10LQ86VR7 867 aa7.93□□□□□ -1.14
SRP54-207ENST00000555535 NLRP13Q86W25 1043 aa7.93□□□□□ -1.14
SRP54-207ENST00000555535 FOSL1P15407 271 aa7.92□□□□□ -1.14
SRP54-207ENST00000555535 ITGB5P18084 799 aa7.92□□□□□ -1.14
SRP54-207ENST00000555535 RNF208Q9H0X6 261 aa7.92□□□□□ -1.14
SRP54-207ENST00000555535 KCNK4Q9NYG8 393 aa7.92□□□□□ -1.14
SRP54-207ENST00000555535 CCDC39Q9UFE4 941 aa7.92□□□□□ -1.14
SRP54-207ENST00000555535 HYAL2Q12891 473 aa7.91□□□□□ -1.14
SRP54-207ENST00000555535 CEP135Q66GS9 1140 aa7.91□□□□□ -1.14
SRP54-207ENST00000555535 TREML1Q86YW5 311 aa7.91□□□□□ -1.14
SRP54-207ENST00000555535 ADAMTS19Q8TE59 1207 aa7.91□□□□□ -1.14
SRP54-207ENST00000555535 WNT8BQ93098 351 aa7.91□□□□□ -1.14
SRP54-207ENST00000555535 KCNMB2Q9Y691 235 aa7.91□□□□□ -1.14
SRP54-207ENST00000555535 HOXA10P31260 410 aaPredicted RBP7.9□□□□□ -1.14
SRP54-207ENST00000555535 MSMPQ1L6U9 139 aa7.9□□□□□ -1.14
SRP54-207ENST00000555535 TP53INP2Q8IXH6 220 aa7.9□□□□□ -1.14
SRP54-207ENST00000555535 AGBL5Q8NDL9 886 aa7.9□□□□□ -1.14
SRP54-207ENST00000555535 OR13H1Q8NG92 308 aa7.9□□□□□ -1.14
SRP54-207ENST00000555535 METTL22Q9BUU2 404 aaPredicted RBP7.9□□□□□ -1.14
SRP54-207ENST00000555535 SEC31BQ9NQW1 1179 aa7.9□□□□□ -1.14
SRP54-207ENST00000555535 TM4SF5O14894 197 aa7.89□□□□□ -1.15
SRP54-207ENST00000555535 FDX2Q6P4F2 183 aa7.89□□□□□ -1.15
SRP54-207ENST00000555535 MFSD14AQ96MC6 490 aa7.89□□□□□ -1.15
SRP54-207ENST00000555535 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
SRP54-207ENST00000555535 LACRTQ9GZZ8 138 aa7.89□□□□□ -1.15
SRP54-207ENST00000555535 USP20Q9Y2K6 914 aa7.89□□□□□ -1.15
SRP54-207ENST00000555535 GAS2O43903 313 aaKnown RBP7.88□□□□□ -1.15
SRP54-207ENST00000555535 PREPP48147 710 aa7.88□□□□□ -1.15
SRP54-207ENST00000555535 DPYDQ12882 1025 aa7.88□□□□□ -1.15
SRP54-207ENST00000555535 TXNDC11Q6PKC3 985 aa7.88□□□□□ -1.15
SRP54-207ENST00000555535 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
SRP54-207ENST00000555535 FAM13BQ9NYF5 915 aa7.88□□□□□ -1.15
SRP54-207ENST00000555535 POM121CA8CG34 1229 aa7.87□□□□□ -1.15
SRP54-207ENST00000555535 PTPRAP18433 802 aa7.87□□□□□ -1.15
SRP54-207ENST00000555535 WEE1P30291 646 aa7.87□□□□□ -1.15
SRP54-207ENST00000555535 PTK7Q13308 1070 aa7.87□□□□□ -1.15
SRP54-207ENST00000555535 FOXD4L4Q8WXT5 416 aaPredicted RBP7.87□□□□□ -1.15
SRP54-207ENST00000555535 BSDC1Q9NW68 430 aaPredicted RBP7.87□□□□□ -1.15
SRP54-207ENST00000555535 MAP4P27816 1152 aaKnown RBP7.86□□□□□ -1.15
SRP54-207ENST00000555535 CABP4P57796 275 aa7.86□□□□□ -1.15
SRP54-207ENST00000555535 PIP4K2BP78356 416 aa7.86□□□□□ -1.15
SRP54-207ENST00000555535 FBLN7Q53RD9 439 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms