RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 UBAC1Q9BSL1 405 aa14.39□□□□□ -0.11
ARHGEF40-206ENST00000555232 USP21Q9UK80 565 aa14.39□□□□□ -0.11
ARHGEF40-206ENST00000555232 CRB1P82279 1406 aa14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 KLF18A0A0U1RQI7 1052 aa14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 hCG_1642624A0A1W2PR95 340 aa14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 PDCP20941 246 aa14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 CYP7A1P22680 504 aa14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 IKQ13123 557 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 USP48Q86UV5 1035 aa14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 CARD10Q9BWT7 1032 aa14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 NACAP1Q9BZK3 213 aa14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 CCNL1Q9UK58 526 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF40-206ENST00000555232 CLSTN1O94985 981 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 SYT1P21579 422 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 HSP90AA4PQ58FG1 418 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 CCDC191Q8NCU4 936 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 C1orf167Q5SNV9 1468 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 USP31Q70CQ4 1352 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 LOC102724428A0A0B4J2F2 783 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 BRPF1P55201 1214 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 SIK1P57059 783 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 ZNF622Q969S3 477 aaKnown RBP eCLIP14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 FSD2A1L4K1 749 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 SLC27A2O14975 620 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 PTPN12Q05209 780 aaKnown RBP14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 DZIP1Q86YF9 867 aaKnown RBP14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 ANKRD18AQ8IVF6 992 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 ERCC4Q92889 916 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 RICTORQ6R327 1708 aa14.37□□□□□ -0.11
ARHGEF40-206ENST00000555232 SART3Q15020 963 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 MSL1Q68DK7 614 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 CMTR1Q8N1G2 835 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 SNX21Q969T3 373 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 SRP68Q9UHB9 627 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 GADD45BO75293 160 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 GYG1P46976 350 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 ANKRD1Q15327 319 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 CCDC152Q4G0S7 254 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 TRIM5Q9C035 493 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 TSPY26PQ9H489 355 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 ARMT1Q9H993 441 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 VAT1LQ9HCJ6 419 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 TTC41PQ6P2S7 1318 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 BCAMP50895 628 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 SAFBQ15424 915 aaKnown RBP eCLIP14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 PDILTQ8N807 584 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 ZNF830Q96NB3 372 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 NLRP3Q96P20 1036 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 USP25Q9UHP3 1055 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 ADCY9O60503 1353 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 KDRP35968 1356 aa14.36□□□□□ -0.11
ARHGEF40-206ENST00000555232 USP5P45974 858 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 RAB3GAP1Q15042 981 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 BABAM1Q9NWV8 329 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 CTNNA3Q9UI47 895 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 AGLP35573 1532 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 KINO60870 393 aaKnown RBP14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 CRKLP46109 303 aaKnown RBP14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 KRT32Q14532 448 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 AMOTL1Q8IY63 956 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 RPGRQ92834 1020 aaKnown RBP14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 GPHNQ9NQX3 736 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 ORC3Q9UBD5 711 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 PTCH1Q13635 1447 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 B4E1Z4 1266 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 ERVV-2B6SEH9 535 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 MBD3O95983 291 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 PRDM4Q9UKN5 801 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 RTCBQ9Y3I0 505 aaKnown RBP14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 PHKA1P46020 1223 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 TMEM67Q5HYA8 995 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 CCDC87Q9NVE4 849 aa14.35□□□□□ -0.11
ARHGEF40-206ENST00000555232 MBD4O95243 580 aa14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 LARGE1O95461 756 aa14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 TRIM34Q9BYJ4 488 aa14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 ATG3Q9NT62 314 aa14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 ARHGEF28Q8N1W1 1705 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 TRMT1LQ7Z2T5 733 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 BBXQ8WY36 941 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 C8orf76Q96K31 380 aa14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 GPR101Q96P66 508 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 CDC5LQ99459 802 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 IQSEC2Q5JU85 1478 aa14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 MARCKSP29966 332 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-206ENST00000555232 ME3Q16798 604 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 USPL1Q5W0Q7 1092 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 PI4K2BQ8TCG2 481 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 STX8Q9UNK0 236 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 RAD50Q92878 1312 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 RNF113AO15541 343 aaKnown RBP14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 DHX8Q14562 1220 aaKnown RBP14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 ZSCAN23Q3MJ62 389 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 SLC26A6Q9BXS9 759 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 INCENPQ9NQS7 918 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 GPAA1O43292 621 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms