RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 TBC1D16Q8TBP0 767 aa17.08■□□□□ 0.32
XRCC3-212ENST00000555231 DCPSQ96C86 337 aaKnown RBP17.08■□□□□ 0.32
XRCC3-212ENST00000555231 EYA3Q99504 573 aa17.08■□□□□ 0.32
XRCC3-212ENST00000555231 ASTN2O75129 1339 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-212ENST00000555231 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
XRCC3-212ENST00000555231 RPS8P62241 208 aaKnown RBP17.07■□□□□ 0.32
XRCC3-212ENST00000555231 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-212ENST00000555231 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
XRCC3-212ENST00000555231 C2orf69Q8N8R5 385 aa17.07■□□□□ 0.32
XRCC3-212ENST00000555231 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
XRCC3-212ENST00000555231 SEC31BQ9NQW1 1179 aa17.07■□□□□ 0.32
XRCC3-212ENST00000555231 AKAP11Q9UKA4 1901 aa17.07■□□□□ 0.32
XRCC3-212ENST00000555231 DUSP27Q5VZP5 1158 aa17.06■□□□□ 0.32
XRCC3-212ENST00000555231 ZC3H12CQ9C0D7 883 aaKnown RBP17.06■□□□□ 0.32
XRCC3-212ENST00000555231 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
XRCC3-212ENST00000555231 HOXB7P09629 217 aa17.05■□□□□ 0.32
XRCC3-212ENST00000555231 ZNF157P51786 506 aaPredicted RBP17.05■□□□□ 0.32
XRCC3-212ENST00000555231 RIC3Q7Z5B4 369 aa17.05■□□□□ 0.32
XRCC3-212ENST00000555231 JARID2Q92833 1246 aaPredicted RBP17.05■□□□□ 0.32
XRCC3-212ENST00000555231 GGA3Q9NZ52 723 aa17.05■□□□□ 0.32
XRCC3-212ENST00000555231 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
XRCC3-212ENST00000555231 G3V3G9 751 aa17.04■□□□□ 0.32
XRCC3-212ENST00000555231 UFL1O94874 794 aa17.04■□□□□ 0.32
XRCC3-212ENST00000555231 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
XRCC3-212ENST00000555231 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.32
XRCC3-212ENST00000555231 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
XRCC3-212ENST00000555231 CCDC102AQ96A19 550 aa17.04■□□□□ 0.32
XRCC3-212ENST00000555231 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
XRCC3-212ENST00000555231 PHAXQ9H814 394 aaKnown RBP17.04■□□□□ 0.32
XRCC3-212ENST00000555231 PSME4Q14997 1843 aa17.03■□□□□ 0.32
XRCC3-212ENST00000555231 TRPA1O75762 1119 aa17.03■□□□□ 0.32
XRCC3-212ENST00000555231 VIL1P09327 827 aaKnown RBP17.03■□□□□ 0.32
XRCC3-212ENST00000555231 SULF1Q8IWU6 871 aa17.03■□□□□ 0.32
XRCC3-212ENST00000555231 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
XRCC3-212ENST00000555231 MYD88Q99836 296 aa17.03■□□□□ 0.32
XRCC3-212ENST00000555231 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
XRCC3-212ENST00000555231 ANKIB1Q9P2G1 1089 aa17.03■□□□□ 0.32
XRCC3-212ENST00000555231 ADAMTS8Q9UP79 889 aa17.03■□□□□ 0.32
XRCC3-212ENST00000555231 ELL2O00472 640 aaPredicted RBP17.02■□□□□ 0.32
XRCC3-212ENST00000555231 GOLGA2Q08379 1002 aa17.02■□□□□ 0.32
XRCC3-212ENST00000555231 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.32
XRCC3-212ENST00000555231 ZBTB38Q8NAP3 1195 aaPredicted RBP17.02■□□□□ 0.32
XRCC3-212ENST00000555231 RNF186Q9NXI6 227 aa17.02■□□□□ 0.32
XRCC3-212ENST00000555231 PODXL2Q9NZ53 605 aa17.02■□□□□ 0.32
XRCC3-212ENST00000555231 GGA1Q9UJY5 639 aa17.02■□□□□ 0.32
XRCC3-212ENST00000555231 SLC10A3P09131 477 aa17.01■□□□□ 0.31
XRCC3-212ENST00000555231 SCARF1Q14162 830 aa17.01■□□□□ 0.31
XRCC3-212ENST00000555231 ANGEL2Q5VTE6 544 aaKnown RBP17.01■□□□□ 0.31
XRCC3-212ENST00000555231 RSBN1LQ6PCB5 846 aaPredicted RBP17■□□□□ 0.31
XRCC3-212ENST00000555231 CSRNP1Q96S65 589 aa17■□□□□ 0.31
XRCC3-212ENST00000555231 SAGE1Q9NXZ1 904 aa17■□□□□ 0.31
XRCC3-212ENST00000555231 SCAF8Q9UPN6 1271 aaKnown RBP17■□□□□ 0.31
XRCC3-212ENST00000555231 SPEF2Q9C093 1822 aa17■□□□□ 0.31
XRCC3-212ENST00000555231 SOX10P56693 466 aa16.99■□□□□ 0.31
XRCC3-212ENST00000555231 CCDC152Q4G0S7 254 aa16.99■□□□□ 0.31
XRCC3-212ENST00000555231 PDE8AO60658 829 aa16.98■□□□□ 0.31
XRCC3-212ENST00000555231 PCCAP05165 728 aaPredicted RBP16.98■□□□□ 0.31
XRCC3-212ENST00000555231 ZNF280AP59817 542 aaPredicted RBP16.98■□□□□ 0.31
XRCC3-212ENST00000555231 RASAL3Q86YV0 1011 aa16.98■□□□□ 0.31
XRCC3-212ENST00000555231 AGBL3Q8NEM8 1001 aa16.98■□□□□ 0.31
XRCC3-212ENST00000555231 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-212ENST00000555231 ZNF853P0CG23 659 aa16.97■□□□□ 0.31
XRCC3-212ENST00000555231 HSP90B1P14625 803 aaKnown RBP16.97■□□□□ 0.31
XRCC3-212ENST00000555231 MOB2Q70IA6 237 aa16.97■□□□□ 0.31
XRCC3-212ENST00000555231 ANKRD18AQ8IVF6 992 aa16.97■□□□□ 0.31
XRCC3-212ENST00000555231 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
XRCC3-212ENST00000555231 CWC25Q9NXE8 425 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-212ENST00000555231 PAPPA2Q9BXP8 1791 aa16.97■□□□□ 0.31
XRCC3-212ENST00000555231 XDHP47989 1333 aa16.96■□□□□ 0.31
XRCC3-212ENST00000555231 USP17L8P0C7I0 530 aa16.96■□□□□ 0.31
XRCC3-212ENST00000555231 GMLQ99445 158 aa16.96■□□□□ 0.31
XRCC3-212ENST00000555231 MYOZ2Q9NPC6 264 aa16.96■□□□□ 0.31
XRCC3-212ENST00000555231 ZNF609O15014 1411 aa16.96■□□□□ 0.3
XRCC3-212ENST00000555231 APAF1O14727 1248 aa16.95■□□□□ 0.3
XRCC3-212ENST00000555231 ATP2B4P23634 1241 aa16.95■□□□□ 0.3
XRCC3-212ENST00000555231 PRAMEF18Q5VWM3 479 aa16.95■□□□□ 0.3
XRCC3-212ENST00000555231 C8orf58Q8NAV2 365 aa16.95■□□□□ 0.3
XRCC3-212ENST00000555231 METTL22Q9BUU2 404 aaPredicted RBP16.95■□□□□ 0.3
XRCC3-212ENST00000555231 MXD3Q9BW11 206 aa16.95■□□□□ 0.3
XRCC3-212ENST00000555231 IFT57Q9NWB7 429 aa16.95■□□□□ 0.3
XRCC3-212ENST00000555231 MYH3P11055 1940 aa16.95■□□□□ 0.3
XRCC3-212ENST00000555231 ZNF646O15015 1829 aaPredicted RBP16.94■□□□□ 0.3
XRCC3-212ENST00000555231 USP17L3A6NCW0 530 aa16.94■□□□□ 0.3
XRCC3-212ENST00000555231 USP17L4A6NCW7 530 aa16.94■□□□□ 0.3
XRCC3-212ENST00000555231 UBE2Q2LH0YL09 131 aa16.94■□□□□ 0.3
XRCC3-212ENST00000555231 GNAI1P63096 354 aa16.94■□□□□ 0.3
XRCC3-212ENST00000555231 USP17L1Q7RTZ2 530 aa16.94■□□□□ 0.3
XRCC3-212ENST00000555231 PDE4DIPQ5VU43 2346 aa16.93■□□□□ 0.3
XRCC3-212ENST00000555231 NBPF9Q3BBW0 867 aa16.93■□□□□ 0.3
XRCC3-212ENST00000555231 PODNQ7Z5L7 613 aa16.93■□□□□ 0.3
XRCC3-212ENST00000555231 CTU1Q7Z7A3 348 aaKnown RBP16.93■□□□□ 0.3
XRCC3-212ENST00000555231 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
XRCC3-212ENST00000555231 MAP3K2Q9Y2U5 619 aa16.93■□□□□ 0.3
XRCC3-212ENST00000555231 TNRC18O15417 2968 aaPredicted RBP16.93■□□□□ 0.3
XRCC3-212ENST00000555231 PITPNM2Q9BZ72 1349 aa16.93■□□□□ 0.3
XRCC3-212ENST00000555231 DDX58O95786 925 aaKnown RBP16.92■□□□□ 0.3
XRCC3-212ENST00000555231 CTSWP56202 376 aa16.92■□□□□ 0.3
XRCC3-212ENST00000555231 FKBP1BP68106 108 aa16.92■□□□□ 0.3
XRCC3-212ENST00000555231 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
XRCC3-212ENST00000555231 TBC1D8O95759 1140 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms