RNA–Protein interactions for RNA: ENST00000555153.2

FXNP1-201, Transcript of frataxin pseudogene 1, humanhuman

BASIC

Gene FXNP1, Length 337 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXNP1-201ENST00000555153 TOB2Q14106 344 aaPredicted RBP8.35□□□□□ -1.07
FXNP1-201ENST00000555153 ANKRD1Q15327 319 aa8.35□□□□□ -1.07
FXNP1-201ENST00000555153 MCMDC2Q4G0Z9 681 aa8.35□□□□□ -1.07
FXNP1-201ENST00000555153 PARP10Q53GL7 1025 aa8.35□□□□□ -1.07
FXNP1-201ENST00000555153 L1TD1Q5T7N2 865 aaKnown RBP8.35□□□□□ -1.07
FXNP1-201ENST00000555153 RC3H1Q5TC82 1133 aaKnown RBP8.35□□□□□ -1.07
FXNP1-201ENST00000555153 TMED8Q6PL24 325 aaPredicted RBP8.35□□□□□ -1.07
FXNP1-201ENST00000555153 KIAA1211Q6ZU35 1233 aa8.35□□□□□ -1.07
FXNP1-201ENST00000555153 DDX54Q8TDD1 881 aaKnown RBP8.35□□□□□ -1.07
FXNP1-201ENST00000555153 AKAP2Q9Y2D5 859 aa8.35□□□□□ -1.07
FXNP1-201ENST00000555153 U3KPZ7 1027 aaPredicted RBP8.35□□□□□ -1.07
FXNP1-201ENST00000555153 ELP1O95163 1332 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 WDR33Q9C0J8 1336 aaKnown RBP8.34□□□□□ -1.07
FXNP1-201ENST00000555153 PDE8AO60658 829 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 HMGB1P09429 215 aaKnown RBP8.34□□□□□ -1.07
FXNP1-201ENST00000555153 ZKSCAN1P17029 563 aaPredicted RBP8.34□□□□□ -1.07
FXNP1-201ENST00000555153 MRE11P49959 708 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.07
FXNP1-201ENST00000555153 HLFQ16534 295 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 LRRC24Q50LG9 513 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 SLC10A5Q5PT55 438 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 RNF20Q5VTR2 975 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 KIF6Q6ZMV9 814 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 SMARCC2Q8TAQ2 1214 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
FXNP1-201ENST00000555153 UPF3BQ9BZI7 483 aaKnown RBP8.34□□□□□ -1.07
FXNP1-201ENST00000555153 BOLA2Q9H3K6 86 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 CYP46A1Q9Y6A2 500 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 MAST2Q6P0Q8 1798 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 CHD4Q14839 1912 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 LTBP1Q14766 1721 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 UBR3Q6ZT12 1888 aa8.34□□□□□ -1.07
FXNP1-201ENST00000555153 MAST3O60307 1309 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 RGPD3A6NKT7 1758 aaPredicted RBP8.33□□□□□ -1.08
FXNP1-201ENST00000555153 RGPD4Q7Z3J3 1758 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 LOC102724428A0A0B4J2F2 783 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 LRRC37AA6NMS7 1700 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 NTSR2O95665 410 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 MBD3O95983 291 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 CYP21A2P08686 494 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 XRCC6P12956 609 aaKnown RBP eCLIP8.33□□□□□ -1.08
FXNP1-201ENST00000555153 SIK1P57059 783 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 ITPK1Q13572 414 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 UBE3CQ15386 1083 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 DDB1Q16531 1140 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 ME3Q16798 604 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 LLPHQ9BRT6 129 aaKnown RBP8.33□□□□□ -1.08
FXNP1-201ENST00000555153 SIL1Q9H173 461 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 DUOX1Q9NRD9 1551 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 PAG1Q9NWQ8 432 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.33□□□□□ -1.08
FXNP1-201ENST00000555153 TAF6LQ9Y6J9 622 aa8.33□□□□□ -1.08
FXNP1-201ENST00000555153 MROH5Q6ZUA9 1318 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 TCRBV5S4A2TA0A5A2 114 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 GOLGA6L22H0YM25 854 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 RNF113AO15541 343 aaKnown RBP8.32□□□□□ -1.08
FXNP1-201ENST00000555153 TOM1O60784 492 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 PDE8BO95263 885 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 LARGE1O95461 756 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 SYT1P21579 422 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 PRIM1P49642 420 aaKnown RBP8.32□□□□□ -1.08
FXNP1-201ENST00000555153 IFIT5Q13325 482 aaKnown RBP8.32□□□□□ -1.08
FXNP1-201ENST00000555153 SF3B3Q15393 1217 aaKnown RBP8.32□□□□□ -1.08
FXNP1-201ENST00000555153 ALX1Q15699 326 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
FXNP1-201ENST00000555153 GAS2L3Q86XJ1 694 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 GPT2Q8TD30 523 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 GTF3C6Q969F1 213 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 PDLIM2Q96JY6 352 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 MTA3Q9BTC8 594 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 FSD1Q9BTV5 496 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 PUS3Q9BZE2 481 aaKnown RBP8.32□□□□□ -1.08
FXNP1-201ENST00000555153 CEP126Q9P2H0 1117 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 TPCN1Q9ULQ1 816 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 MTMR6Q9Y217 621 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 DLEC1Q9Y238 1755 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 NRXN2Q9P2S2 1712 aa8.32□□□□□ -1.08
FXNP1-201ENST00000555153 IRS2Q9Y4H2 1338 aa8.31□□□□□ -1.08
FXNP1-201ENST00000555153 MAP4K4O95819 1239 aaPredicted RBP8.31□□□□□ -1.08
FXNP1-201ENST00000555153 ZSCAN22P10073 491 aaPredicted RBP8.31□□□□□ -1.08
FXNP1-201ENST00000555153 HSPD1P10809 573 aaKnown RBP8.31□□□□□ -1.08
FXNP1-201ENST00000555153 HSP90B1P14625 803 aaKnown RBP8.31□□□□□ -1.08
FXNP1-201ENST00000555153 CASTP20810 708 aaKnown RBP8.31□□□□□ -1.08
FXNP1-201ENST00000555153 CRKLP46109 303 aaKnown RBP8.31□□□□□ -1.08
FXNP1-201ENST00000555153 CCDC57Q2TAC2 916 aa8.31□□□□□ -1.08
FXNP1-201ENST00000555153 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
FXNP1-201ENST00000555153 STOX1Q6ZVD7 989 aa8.31□□□□□ -1.08
FXNP1-201ENST00000555153 APPBP2Q92624 585 aa8.31□□□□□ -1.08
FXNP1-201ENST00000555153 FAM89AQ96GI7 184 aa8.31□□□□□ -1.08
FXNP1-201ENST00000555153 XAGE2Q96GT9 111 aa8.31□□□□□ -1.08
FXNP1-201ENST00000555153 JAKMIP1Q96N16 626 aaKnown RBP8.31□□□□□ -1.08
FXNP1-201ENST00000555153 PPP1R9BQ96SB3 815 aa8.31□□□□□ -1.08
FXNP1-201ENST00000555153 GREM2Q9H772 168 aa8.31□□□□□ -1.08
FXNP1-201ENST00000555153 PDRG1Q9NUG6 133 aa8.31□□□□□ -1.08
FXNP1-201ENST00000555153 IRS4O14654 1257 aaPredicted RBP8.3□□□□□ -1.08
FXNP1-201ENST00000555153 STX6O43752 255 aa8.3□□□□□ -1.08
FXNP1-201ENST00000555153 PFKFB2O60825 505 aa8.3□□□□□ -1.08
FXNP1-201ENST00000555153 F13A1P00488 732 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms