RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-208ENST00000555117 COL13A1Q5TAT6 717 aaPredicted RBP28.36■■■□□ 2.13
COCH-208ENST00000555117 SCN9AQ15858 1988 aa28.35■■■□□ 2.13
COCH-208ENST00000555117 ECE2O60344 883 aa28.35■■■□□ 2.13
COCH-208ENST00000555117 VEGFBP49765 207 aa28.35■■■□□ 2.13
COCH-208ENST00000555117 DOK7Q18PE1 504 aa28.35■■■□□ 2.13
COCH-208ENST00000555117 ANKRD18AQ8IVF6 992 aa28.35■■■□□ 2.13
COCH-208ENST00000555117 ANKIB1Q9P2G1 1089 aa28.35■■■□□ 2.13
COCH-208ENST00000555117 CNOT7Q9UIV1 285 aaKnown RBP28.35■■■□□ 2.13
COCH-208ENST00000555117 ABT1Q9ULW3 272 aaKnown RBP28.35■■■□□ 2.13
COCH-208ENST00000555117 ZBTB12Q9Y330 459 aaPredicted RBP28.35■■■□□ 2.13
COCH-208ENST00000555117 RASSF10A6NK89 507 aa28.34■■■□□ 2.13
COCH-208ENST00000555117 PSMD14O00487 310 aa28.34■■■□□ 2.13
COCH-208ENST00000555117 UFL1O94874 794 aa28.34■■■□□ 2.13
COCH-208ENST00000555117 EXOSC9Q06265 439 aaKnown RBP28.34■■■□□ 2.13
COCH-208ENST00000555117 ZC3H12CQ9C0D7 883 aaKnown RBP28.34■■■□□ 2.13
COCH-208ENST00000555117 MYH16Q9H6N6 1097 aa28.34■■■□□ 2.13
COCH-208ENST00000555117 SHTN1A0MZ66 631 aa28.33■■■□□ 2.13
COCH-208ENST00000555117 TRAF5O00463 557 aa28.33■■■□□ 2.13
COCH-208ENST00000555117 VAMP4O75379 141 aa28.33■■■□□ 2.13
COCH-208ENST00000555117 FKBP5Q13451 457 aaPredicted RBP28.33■■■□□ 2.13
COCH-208ENST00000555117 DEFB115Q30KQ5 88 aa28.33■■■□□ 2.13
COCH-208ENST00000555117 GGA1Q9UJY5 639 aa28.33■■■□□ 2.13
COCH-208ENST00000555117 PSME4Q14997 1843 aa28.32■■■□□ 2.12
COCH-208ENST00000555117 MICALL2Q8IY33 904 aa28.32■■■□□ 2.12
COCH-208ENST00000555117 TTLL11Q8NHH1 800 aa28.32■■■□□ 2.12
COCH-208ENST00000555117 TRPM4Q8TD43 1214 aa28.32■■■□□ 2.12
COCH-208ENST00000555117 H7C1D1 291 aa28.31■■■□□ 2.12
COCH-208ENST00000555117 HIRAP54198 1017 aaPredicted RBP28.31■■■□□ 2.12
COCH-208ENST00000555117 SLFN5Q08AF3 891 aa28.31■■■□□ 2.12
COCH-208ENST00000555117 UBE3BQ7Z3V4 1068 aa28.31■■■□□ 2.12
COCH-208ENST00000555117 DPF2Q92785 391 aa28.31■■■□□ 2.12
COCH-208ENST00000555117 CDC5LQ99459 802 aaKnown RBP28.31■■■□□ 2.12
COCH-208ENST00000555117 KCNQ5Q9NR82 932 aa28.31■■■□□ 2.12
COCH-208ENST00000555117 RTL9Q8NET4 1388 aa28.31■■■□□ 2.12
COCH-208ENST00000555117 XDHP47989 1333 aa28.3■■■□□ 2.12
COCH-208ENST00000555117 E9PSI1 815 aa28.3■■■□□ 2.12
COCH-208ENST00000555117 H7C1W4 665 aa28.3■■■□□ 2.12
COCH-208ENST00000555117 TRMT2AQ8IZ69 625 aaKnown RBP28.3■■■□□ 2.12
COCH-208ENST00000555117 ZC3H15Q8WU90 426 aaKnown RBP28.3■■■□□ 2.12
COCH-208ENST00000555117 DNAAF4Q8WXU2 420 aa28.3■■■□□ 2.12
COCH-208ENST00000555117 GREM2Q9H772 168 aa28.3■■■□□ 2.12
COCH-208ENST00000555117 PGAP2Q9UHJ9 254 aa28.3■■■□□ 2.12
COCH-208ENST00000555117 G3V3G9 751 aa28.29■■■□□ 2.12
COCH-208ENST00000555117 DCAF8Q5TAQ9 597 aa28.29■■■□□ 2.12
COCH-208ENST00000555117 CDCA7LQ96GN5 454 aa28.29■■■□□ 2.12
COCH-208ENST00000555117 GCKRQ14397 625 aa28.28■■■□□ 2.12
COCH-208ENST00000555117 CST9Q5W186 159 aa28.28■■■□□ 2.12
COCH-208ENST00000555117 GLIS2Q9BZE0 524 aaPredicted RBP28.28■■■□□ 2.12
COCH-208ENST00000555117 RPS12P25398 132 aaKnown RBP28.27■■■□□ 2.12
COCH-208ENST00000555117 ATP2B4P23634 1241 aa28.26■■■□□ 2.11
COCH-208ENST00000555117 HNRNPUQ00839 825 aaKnown RBP eCLIP28.26■■■□□ 2.11
COCH-208ENST00000555117 SAMD7Q7Z3H4 446 aa28.26■■■□□ 2.11
COCH-208ENST00000555117 LINS1Q8NG48 757 aa28.26■■■□□ 2.11
COCH-208ENST00000555117 THSD7BQ9C0I4 1608 aa28.25■■■□□ 2.11
COCH-208ENST00000555117 WDR33Q9C0J8 1336 aaKnown RBP28.25■■■□□ 2.11
COCH-208ENST00000555117 BSDC1Q9NW68 430 aaPredicted RBP28.25■■■□□ 2.11
COCH-208ENST00000555117 POLR2AP24928 1970 aaKnown RBP28.24■■■□□ 2.11
COCH-208ENST00000555117 CASP7P55210 303 aa28.24■■■□□ 2.11
COCH-208ENST00000555117 TBC1D10BQ4KMP7 808 aaPredicted RBP28.24■■■□□ 2.11
COCH-208ENST00000555117 CDC37L1Q7L3B6 337 aa28.24■■■□□ 2.11
COCH-208ENST00000555117 PLA2G12BQ9BX93 195 aa28.24■■■□□ 2.11
COCH-208ENST00000555117 MINPP1Q9UNW1 487 aa28.24■■■□□ 2.11
COCH-208ENST00000555117 FOXN1O15353 648 aa28.23■■■□□ 2.11
COCH-208ENST00000555117 CELF2O95319 508 aaKnown RBP28.23■■■□□ 2.11
COCH-208ENST00000555117 VIL1P09327 827 aaKnown RBP28.23■■■□□ 2.11
COCH-208ENST00000555117 PAXIP1Q6ZW49 1069 aaPredicted RBP28.23■■■□□ 2.11
COCH-208ENST00000555117 TNS4Q8IZW8 715 aa28.23■■■□□ 2.11
COCH-208ENST00000555117 TLL2Q9Y6L7 1015 aa28.23■■■□□ 2.11
COCH-208ENST00000555117 EGFRP00533 1210 aa28.22■■■□□ 2.11
COCH-208ENST00000555117 AIDAQ96BJ3 306 aa28.22■■■□□ 2.11
COCH-208ENST00000555117 IGHMBP2P38935 993 aaKnown RBP28.21■■■□□ 2.11
COCH-208ENST00000555117 RBM26Q5T8P6 1007 aaKnown RBP28.21■■■□□ 2.11
COCH-208ENST00000555117 ZNF408Q9H9D4 720 aa28.21■■■□□ 2.11
COCH-208ENST00000555117 ZNF609O15014 1411 aa28.2■■■□□ 2.11
COCH-208ENST00000555117 F6X3S4 739 aa28.2■■■□□ 2.1
COCH-208ENST00000555117 ITGA6P23229 1130 aa28.2■■■□□ 2.1
COCH-208ENST00000555117 FAM161AQ3B820 660 aa28.2■■■□□ 2.1
COCH-208ENST00000555117 CYP4F22Q6NT55 531 aa28.2■■■□□ 2.1
COCH-208ENST00000555117 CAPNS2Q96L46 248 aa28.2■■■□□ 2.1
COCH-208ENST00000555117 WBP1LQ9NX94 342 aa28.2■■■□□ 2.1
COCH-208ENST00000555117 MED23Q9ULK4 1368 aa28.2■■■□□ 2.1
COCH-208ENST00000555117 WTIPA6NIX2 430 aaPredicted RBP28.19■■■□□ 2.1
COCH-208ENST00000555117 ECE1P42892 770 aa28.19■■■□□ 2.1
COCH-208ENST00000555117 CCT4P50991 539 aaKnown RBP28.19■■■□□ 2.1
COCH-208ENST00000555117 ZNF646O15015 1829 aaPredicted RBP28.19■■■□□ 2.1
COCH-208ENST00000555117 CSF1RP07333 972 aa28.18■■■□□ 2.1
COCH-208ENST00000555117 GRM1Q13255 1194 aa28.18■■■□□ 2.1
COCH-208ENST00000555117 KIF4BQ2VIQ3 1234 aa28.18■■■□□ 2.1
COCH-208ENST00000555117 RSBN1LQ6PCB5 846 aaPredicted RBP28.18■■■□□ 2.1
COCH-208ENST00000555117 SAPCD2Q86UD0 394 aa28.18■■■□□ 2.1
COCH-208ENST00000555117 USP48Q86UV5 1035 aa28.18■■■□□ 2.1
COCH-208ENST00000555117 A0A1B0GUL6 1792 aa28.17■■■□□ 2.1
COCH-208ENST00000555117 BEND3Q5T5X7 828 aa28.17■■■□□ 2.1
COCH-208ENST00000555117 PODNQ7Z5L7 613 aa28.17■■■□□ 2.1
COCH-208ENST00000555117 ZBED9Q6R2W3 1325 aa28.17■■■□□ 2.1
COCH-208ENST00000555117 MAP2K1Q02750 393 aaPredicted RBP28.16■■■□□ 2.1
COCH-208ENST00000555117 AGBL3Q8NEM8 1001 aa28.16■■■□□ 2.1
COCH-208ENST00000555117 MPHOSPH8Q99549 860 aa28.16■■■□□ 2.1
COCH-208ENST00000555117 CTCFP49711 727 aaPredicted RBP28.15■■■□□ 2.1
COCH-208ENST00000555117 KRT26Q7Z3Y9 468 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms