RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 FOXR1Q6PIV2 292 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 NYAP1Q6ZVC0 841 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 SUGCTQ9HAC7 445 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 FEZ2Q9UHY8 353 aaPredicted RBP10.36□□□□□ -0.75
SYNE2-217ENST00000555022 TTC21BQ7Z4L5 1316 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 SASH3O75995 380 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 GNG11P61952 73 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 SCRN1Q12765 414 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 RESTQ13127 1097 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 STK38Q15208 465 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 TTC21AQ8NDW8 1320 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 ATP7BP35670 1465 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 KIF24Q5T7B8 1368 aa10.36□□□□□ -0.75
SYNE2-217ENST00000555022 PTPDC1A2A3K4 754 aa10.35□□□□□ -0.75
SYNE2-217ENST00000555022 GNAT3A8MTJ3 354 aa10.35□□□□□ -0.75
SYNE2-217ENST00000555022 NDUFA8P51970 172 aa10.35□□□□□ -0.75
SYNE2-217ENST00000555022 NEUROD6Q96NK8 337 aa10.35□□□□□ -0.75
SYNE2-217ENST00000555022 CCDC85AQ96PX6 553 aaPredicted RBP10.35□□□□□ -0.75
SYNE2-217ENST00000555022 PSMA5P28066 241 aa10.35□□□□□ -0.75
SYNE2-217ENST00000555022 NBPF11Q86T75 865 aa10.35□□□□□ -0.75
SYNE2-217ENST00000555022 INO80Q9ULG1 1556 aaPredicted RBP10.35□□□□□ -0.75
SYNE2-217ENST00000555022 RIMS1Q86UR5 1692 aaKnown RBP10.35□□□□□ -0.75
SYNE2-217ENST00000555022 DLG5Q8TDM6 1919 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 A0A0U1RQJ8 604 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 ZNF827Q17R98 1081 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 FKBP15Q5T1M5 1219 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 ATRIPQ8WXE1 791 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 PUS7Q96PZ0 661 aaKnown RBP10.34□□□□□ -0.75
SYNE2-217ENST00000555022 BICC1Q9H694 974 aaKnown RBP10.34□□□□□ -0.75
SYNE2-217ENST00000555022 VPS18Q9P253 973 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 CLIC4Q9Y696 253 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 CRB1P82279 1406 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 SSH2Q76I76 1423 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 SETBP1Q9Y6X0 1596 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 FANCGO15287 622 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 CYP2C19P33261 490 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 ADKP55263 362 aaKnown RBP10.34□□□□□ -0.75
SYNE2-217ENST00000555022 RNF20Q5VTR2 975 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 TRMT44Q8IYL2 757 aaKnown RBP10.34□□□□□ -0.75
SYNE2-217ENST00000555022 GPATCH11Q8N954 259 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 SUCLG2Q96I99 432 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 NEK1Q96PY6 1258 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 LZTFL1Q9NQ48 299 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 SNRKQ9NRH2 765 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 ANO10Q9NW15 660 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-217ENST00000555022 RHOXF2BP0C7M4 288 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 WDR24Q96S15 920 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 RHOXF2Q9BQY4 288 aa10.34□□□□□ -0.75
SYNE2-217ENST00000555022 METP08581 1390 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 N4BP1O75113 896 aaKnown RBP10.33□□□□□ -0.76
SYNE2-217ENST00000555022 FAM193AP78312 1265 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 ZSCAN26Q16670 478 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 FBXO41Q8TF61 875 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 LRRC59Q96AG4 307 aaKnown RBP10.33□□□□□ -0.76
SYNE2-217ENST00000555022 AIFM3Q96NN9 605 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 SASH1O94885 1247 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 SART3Q15020 963 aaKnown RBP10.33□□□□□ -0.76
SYNE2-217ENST00000555022 NFATC2IPQ8NCF5 419 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 EVI5LQ96CN4 794 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 ORC3Q9UBD5 711 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-217ENST00000555022 PCDHA7Q9UN72 937 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 ASXL2Q76L83 1435 aa10.33□□□□□ -0.76
SYNE2-217ENST00000555022 FAM69CQ0P6D2 419 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 SMC1AQ14683 1233 aaKnown RBP10.32□□□□□ -0.76
SYNE2-217ENST00000555022 E2F4Q16254 413 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-217ENST00000555022 ARGLU1Q9NWB6 273 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-217ENST00000555022 PPLO60437 1756 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 USP32Q8NFA0 1604 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 PTCD1O75127 700 aaKnown RBP10.32□□□□□ -0.76
SYNE2-217ENST00000555022 MTF1Q14872 753 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 STOX1Q6ZVD7 989 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 CCDC82Q8N4S0 544 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 MAP4K1Q92918 833 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 SLC52A1Q9NWF4 448 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 CFAP45Q9UL16 551 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 SLC39A6Q13433 755 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 MTX1Q13505 466 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 BEND3Q5T5X7 828 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 MRFAP1L1Q96HT8 127 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 POLD4Q9HCU8 107 aa10.32□□□□□ -0.76
SYNE2-217ENST00000555022 CYP21A2P08686 494 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 FANCCQ00597 558 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 PNOCQ13519 176 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 CCDC102AQ96A19 550 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 ZNF330Q9Y3S2 320 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-217ENST00000555022 CPSF1Q10570 1443 aaKnown RBP10.31□□□□□ -0.76
SYNE2-217ENST00000555022 YEATS2Q9ULM3 1422 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 NEXMIFQ5QGS0 1516 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 H3BQF6 201 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 GOLIM4O00461 696 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 SLC3A2P08195 630 aaKnown RBP10.31□□□□□ -0.76
SYNE2-217ENST00000555022 UBASH3AP57075 661 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 POLA2Q14181 598 aa10.31□□□□□ -0.76
SYNE2-217ENST00000555022 EDC4Q6P2E9 1401 aaKnown RBP10.31□□□□□ -0.76
SYNE2-217ENST00000555022 MYO1CO00159 1063 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms