RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	RNF225	M0QZC1	329 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	CYP2E1	P05181	493 aa	Predicted RBP	9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	PSAP	P07602	524 aa		9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	NRL	P54845	237 aa		9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	ARHGAP4	P98171	946 aa		9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	KANK3	Q6NY19	840 aa		9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	C20orf204	Q6ZNR8	217 aa		9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	ZNF438	Q7Z4V0	828 aa		9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	TRIM11	Q96F44	468 aa		9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	ELP3	Q9H9T3	547 aa		9.21	□□□□□ -0.94
PSMC6-208	ENST00000554956	PHF20L1	A8MW92	1017 aa		9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956		J3QW42	95 aa		9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	PCSK2	P16519	638 aa		9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	PLAUR	Q03405	335 aa		9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	KCNMA1	Q12791	1236 aa		9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	PERM1	Q5SV97	790 aa		9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	JPH1	Q9HDC5	661 aa	Predicted RBP	9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	ABI2	Q9NYB9	513 aa	Predicted RBP	9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	GNE	Q9Y223	722 aa	Known RBP	9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	URB2	Q14146	1524 aa	Known RBP	9.2	□□□□□ -0.94
PSMC6-208	ENST00000554956	SOWAHD	A6NJG2	315 aa		9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	GNB5	O14775	395 aa		9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	EIF2AK2	P19525	551 aa	Known RBP	9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	RASSF7	Q02833	373 aa		9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	COL9A3	Q14050	684 aa	Predicted RBP	9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	TTC39B	Q5VTQ0	682 aa	Predicted RBP	9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	PDE12	Q6L8Q7	609 aa	Known RBP	9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	OR13H1	Q8NG92	308 aa		9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	LPIN3	Q9BQK8	851 aa		9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	CNTN3	Q9P232	1028 aa		9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	IVNS1ABP	Q9Y6Y0	642 aa		9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	TOP2A	P11388	1531 aa	Known RBP	9.19	□□□□□ -0.94
PSMC6-208	ENST00000554956	COL8A1	P27658	744 aa		9.18	□□□□□ -0.94
PSMC6-208	ENST00000554956	SOX18	P35713	384 aa		9.18	□□□□□ -0.94
PSMC6-208	ENST00000554956	KANSL3	Q9P2N6	904 aa		9.18	□□□□□ -0.94
PSMC6-208	ENST00000554956	RPLP1	P05386	114 aa	Known RBP	9.17	□□□□□ -0.94
PSMC6-208	ENST00000554956	HOXD8	P13378	290 aa	Predicted RBP	9.17	□□□□□ -0.94
PSMC6-208	ENST00000554956	PCSK7	Q16549	785 aa		9.17	□□□□□ -0.94
PSMC6-208	ENST00000554956	GJD3	Q8N144	294 aa		9.17	□□□□□ -0.94
PSMC6-208	ENST00000554956	TTC16	Q8NEE8	873 aa		9.17	□□□□□ -0.94
PSMC6-208	ENST00000554956	LOC102724428	A0A0B4J2F2	783 aa		9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	LILRB5	O75023	590 aa		9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	RGS9	O75916	674 aa	Predicted RBP	9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	NID1	P14543	1247 aa		9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	SIK1	P57059	783 aa		9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	ELMSAN1	Q6PJG2	1045 aa		9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	C1orf127	Q8N9H9	656 aa		9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	SMG9	Q9H0W8	520 aa	Known RBP	9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	PRDM6	Q9NQX0	595 aa		9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	FOXD3	Q9UJU5	478 aa	Predicted RBP	9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	BRPF3	Q9ULD4	1205 aa		9.16	□□□□□ -0.94
PSMC6-208	ENST00000554956	CCDC88B	A6NC98	1476 aa		9.15	□□□□□ -0.94
PSMC6-208	ENST00000554956	AFF1	P51825	1210 aa	Known RBP	9.15	□□□□□ -0.94
PSMC6-208	ENST00000554956	KCNA1	Q09470	495 aa		9.15	□□□□□ -0.94
PSMC6-208	ENST00000554956	XKR5	Q6UX68	686 aa		9.15	□□□□□ -0.94
PSMC6-208	ENST00000554956	PLVAP	Q9BX97	442 aa		9.15	□□□□□ -0.94
PSMC6-208	ENST00000554956	CHRD	Q9H2X0	955 aa		9.15	□□□□□ -0.94
PSMC6-208	ENST00000554956	BIN2	Q9UBW5	565 aa	Predicted RBP	9.15	□□□□□ -0.94
PSMC6-208	ENST00000554956	GDF11	O95390	407 aa		9.14	□□□□□ -0.95
PSMC6-208	ENST00000554956	PDIA4	P13667	645 aa	Known RBP	9.14	□□□□□ -0.95
PSMC6-208	ENST00000554956	USP5	P45974	858 aa		9.14	□□□□□ -0.95
PSMC6-208	ENST00000554956	PLD4	Q96BZ4	506 aa		9.14	□□□□□ -0.95
PSMC6-208	ENST00000554956	FAM229A	H3BQW9	127 aa		9.13	□□□□□ -0.95
PSMC6-208	ENST00000554956	TNFRSF21	O75509	655 aa		9.13	□□□□□ -0.95
PSMC6-208	ENST00000554956	GHRH	P01286	108 aa		9.13	□□□□□ -0.95
PSMC6-208	ENST00000554956	ATP11A	P98196	1134 aa		9.13	□□□□□ -0.95
PSMC6-208	ENST00000554956	HYAL2	Q12891	473 aa		9.13	□□□□□ -0.95
PSMC6-208	ENST00000554956	GRIK5	Q16478	980 aa		9.13	□□□□□ -0.95
PSMC6-208	ENST00000554956	TMEM151A	Q8N4L1	468 aa		9.13	□□□□□ -0.95
PSMC6-208	ENST00000554956	DCAF5	Q96JK2	942 aa		9.13	□□□□□ -0.95
PSMC6-208	ENST00000554956	FRRS1L	Q9P0K9	344 aa		9.13	□□□□□ -0.95
PSMC6-208	ENST00000554956	ZNF608	Q9ULD9	1512 aa	Predicted RBP	9.12	□□□□□ -0.95
PSMC6-208	ENST00000554956	NDUFB5	O43674	189 aa		9.12	□□□□□ -0.95
PSMC6-208	ENST00000554956	ACPP	P15309	386 aa		9.12	□□□□□ -0.95
PSMC6-208	ENST00000554956	AEBP1	Q8IUX7	1158 aa		9.12	□□□□□ -0.95
PSMC6-208	ENST00000554956	PIK3R2	O00459	728 aa		9.11	□□□□□ -0.95
PSMC6-208	ENST00000554956	EREG	O14944	169 aa		9.11	□□□□□ -0.95
PSMC6-208	ENST00000554956	PHACTR2	O75167	634 aa		9.11	□□□□□ -0.95
PSMC6-208	ENST00000554956	KIF4A	O95239	1232 aa		9.11	□□□□□ -0.95
PSMC6-208	ENST00000554956	CES1	P23141	567 aa		9.11	□□□□□ -0.95
PSMC6-208	ENST00000554956	SNX29	Q8TEQ0	813 aa		9.11	□□□□□ -0.95
PSMC6-208	ENST00000554956	NOP53	Q9NZM5	478 aa	Known RBP	9.11	□□□□□ -0.95
PSMC6-208	ENST00000554956	TRIM33	Q9UPN9	1127 aa		9.11	□□□□□ -0.95
PSMC6-208	ENST00000554956	EHHADH	Q08426	723 aa		9.1	□□□□□ -0.95
PSMC6-208	ENST00000554956	GDF6	Q6KF10	455 aa	Predicted RBP	9.1	□□□□□ -0.95
PSMC6-208	ENST00000554956	NCAPG2	Q86XI2	1143 aa		9.1	□□□□□ -0.95
PSMC6-208	ENST00000554956	HOMEZ	Q8IX15	550 aa		9.1	□□□□□ -0.95
PSMC6-208	ENST00000554956	RASSF4	Q9H2L5	321 aa		9.1	□□□□□ -0.95
PSMC6-208	ENST00000554956	KRBA1	A5PL33	1030 aa		9.09	□□□□□ -0.95
PSMC6-208	ENST00000554956	GPR182	O15218	404 aa		9.09	□□□□□ -0.95
PSMC6-208	ENST00000554956	TRAPPC3L	Q5T215	181 aa		9.09	□□□□□ -0.95
PSMC6-208	ENST00000554956	ADAMTSL4	Q6UY14	1074 aa		9.09	□□□□□ -0.95
PSMC6-208	ENST00000554956	DMRTC2	Q8IXT2	367 aa	Predicted RBP	9.09	□□□□□ -0.95
PSMC6-208	ENST00000554956	CEP120	Q8N960	986 aa		9.09	□□□□□ -0.95
PSMC6-208	ENST00000554956	FAM129B	Q96TA1	746 aa		9.09	□□□□□ -0.95
PSMC6-208	ENST00000554956	RBSN	Q9H1K0	784 aa		9.09	□□□□□ -0.95
PSMC6-208	ENST00000554956	SALL4	Q9UJQ4	1053 aa		9.09	□□□□□ -0.95
PSMC6-208	ENST00000554956	TRPA1	O75762	1119 aa		9.08	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms