RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 PTPN12Q05209 780 aaKnown RBP19.54■□□□□ 0.72
XRCC3-209ENST00000554913 COPRSQ9NQ92 184 aa19.54■□□□□ 0.72
XRCC3-209ENST00000554913 TNNT1P13805 278 aa19.54■□□□□ 0.72
XRCC3-209ENST00000554913 RFX5P48382 616 aaPredicted RBP19.54■□□□□ 0.72
XRCC3-209ENST00000554913 ZNF790Q6PG37 636 aa19.54■□□□□ 0.72
XRCC3-209ENST00000554913 C11orf57Q6ZUT1 292 aaPredicted RBP19.54■□□□□ 0.72
XRCC3-209ENST00000554913 DBNDD2Q9BQY9 259 aa19.54■□□□□ 0.72
XRCC3-209ENST00000554913 METTL22Q9BUU2 404 aaPredicted RBP19.54■□□□□ 0.72
XRCC3-209ENST00000554913 U3KPZ7 1027 aaPredicted RBP19.54■□□□□ 0.72
XRCC3-209ENST00000554913 MRC1P22897 1456 aa19.53■□□□□ 0.72
XRCC3-209ENST00000554913 ADD1P35611 737 aaKnown RBP19.53■□□□□ 0.72
XRCC3-209ENST00000554913 DMTNQ08495 405 aa19.53■□□□□ 0.72
XRCC3-209ENST00000554913 STOX1Q6ZVD7 989 aa19.53■□□□□ 0.72
XRCC3-209ENST00000554913 DDX46Q7L014 1031 aaKnown RBP19.53■□□□□ 0.72
XRCC3-209ENST00000554913 ZSCAN16Q9H4T2 348 aaPredicted RBP19.53■□□□□ 0.72
XRCC3-209ENST00000554913 CFAP45Q9UL16 551 aa19.53■□□□□ 0.72
XRCC3-209ENST00000554913 CCDC9Q9Y3X0 531 aaKnown RBP19.53■□□□□ 0.72
XRCC3-209ENST00000554913 IQCB1Q15051 598 aa19.53■□□□□ 0.72
XRCC3-209ENST00000554913 A0A087WWV3 80 aa19.52■□□□□ 0.72
XRCC3-209ENST00000554913 FGD1P98174 961 aa19.52■□□□□ 0.72
XRCC3-209ENST00000554913 NCBP1Q09161 790 aaKnown RBP19.52■□□□□ 0.72
XRCC3-209ENST00000554913 ARID5BQ14865 1188 aa19.52■□□□□ 0.71
XRCC3-209ENST00000554913 SLFNL1Q499Z3 407 aa19.52■□□□□ 0.71
XRCC3-209ENST00000554913 MCMDC2Q4G0Z9 681 aa19.52■□□□□ 0.71
XRCC3-209ENST00000554913 SMARCC2Q8TAQ2 1214 aa19.52■□□□□ 0.71
XRCC3-209ENST00000554913 ZHX1Q9UKY1 873 aaPredicted RBP19.52■□□□□ 0.71
XRCC3-209ENST00000554913 PPFIA3O75145 1194 aa19.51■□□□□ 0.71
XRCC3-209ENST00000554913 GOLPH3LQ9H4A5 285 aa19.51■□□□□ 0.71
XRCC3-209ENST00000554913 SMTNL1A8MU46 457 aa19.51■□□□□ 0.71
XRCC3-209ENST00000554913 UBE3BQ7Z3V4 1068 aa19.51■□□□□ 0.71
XRCC3-209ENST00000554913 CCAR1Q8IX12 1150 aaKnown RBP19.51■□□□□ 0.71
XRCC3-209ENST00000554913 NSUN7Q8NE18 718 aaKnown RBP19.51■□□□□ 0.71
XRCC3-209ENST00000554913 ORAI2Q96SN7 254 aa19.51■□□□□ 0.71
XRCC3-209ENST00000554913 GOLGA6L19H0YKK7 550 aa19.5■□□□□ 0.71
XRCC3-209ENST00000554913 CTDNEP1O95476 244 aa19.5■□□□□ 0.71
XRCC3-209ENST00000554913 NAA30Q147X3 362 aaPredicted RBP19.5■□□□□ 0.71
XRCC3-209ENST00000554913 TPD52L1Q16890 204 aaPredicted RBP19.5■□□□□ 0.71
XRCC3-209ENST00000554913 ANKRD13DQ6ZTN6 518 aa19.5■□□□□ 0.71
XRCC3-209ENST00000554913 PHRF1Q9P1Y6 1649 aaKnown RBP19.5■□□□□ 0.71
XRCC3-209ENST00000554913 PFKFB2O60825 505 aa19.5■□□□□ 0.71
XRCC3-209ENST00000554913 NFATC2IPQ8NCF5 419 aa19.5■□□□□ 0.71
XRCC3-209ENST00000554913 HAUS7Q99871 368 aa19.5■□□□□ 0.71
XRCC3-209ENST00000554913 CAVIN2O95810 425 aa19.49■□□□□ 0.71
XRCC3-209ENST00000554913 CDC25BP30305 580 aa19.49■□□□□ 0.71
XRCC3-209ENST00000554913 APOBRQ0VD83 1088 aa19.49■□□□□ 0.71
XRCC3-209ENST00000554913 RCOR1Q9UKL0 485 aa19.49■□□□□ 0.71
XRCC3-209ENST00000554913 SIPA1L3O60292 1781 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-209ENST00000554913 CCT2P78371 535 aaKnown RBP19.49■□□□□ 0.71
XRCC3-209ENST00000554913 UTP14CQ5TAP6 766 aaKnown RBP19.49■□□□□ 0.71
XRCC3-209ENST00000554913 LRRC8AQ8IWT6 810 aa19.49■□□□□ 0.71
XRCC3-209ENST00000554913 ZNF496Q96IT1 587 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-209ENST00000554913 USP28Q96RU2 1077 aa19.49■□□□□ 0.71
XRCC3-209ENST00000554913 A0A0G2JLW4 131 aa19.48■□□□□ 0.71
XRCC3-209ENST00000554913 ATP5J2-PTCD1G3V325 749 aa19.48■□□□□ 0.71
XRCC3-209ENST00000554913 PTCD1O75127 700 aaKnown RBP19.48■□□□□ 0.71
XRCC3-209ENST00000554913 SNW1Q13573 536 aaKnown RBP19.48■□□□□ 0.71
XRCC3-209ENST00000554913 SLC52A2Q9HAB3 445 aa19.48■□□□□ 0.71
XRCC3-209ENST00000554913 USP16Q9Y5T5 823 aa19.48■□□□□ 0.71
XRCC3-209ENST00000554913 PTPDC1A2A3K4 754 aa19.48■□□□□ 0.71
XRCC3-209ENST00000554913 SARM1Q6SZW1 724 aa19.48■□□□□ 0.71
XRCC3-209ENST00000554913 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
XRCC3-209ENST00000554913 LLPHQ9BRT6 129 aaKnown RBP19.48■□□□□ 0.71
XRCC3-209ENST00000554913 BCL11BQ9C0K0 894 aaPredicted RBP19.48■□□□□ 0.71
XRCC3-209ENST00000554913 NCOA5Q9HCD5 579 aaKnown RBP19.48■□□□□ 0.71
XRCC3-209ENST00000554913 USP27XA6NNY8 438 aa19.47■□□□□ 0.71
XRCC3-209ENST00000554913 STX1AQ16623 288 aa19.47■□□□□ 0.71
XRCC3-209ENST00000554913 NAA16Q6N069 864 aaPredicted RBP19.47■□□□□ 0.71
XRCC3-209ENST00000554913 LRP10Q7Z4F1 713 aa19.47■□□□□ 0.71
XRCC3-209ENST00000554913 ERCC4Q92889 916 aaPredicted RBP19.47■□□□□ 0.71
XRCC3-209ENST00000554913 GUCY1B3Q02153 619 aa19.47■□□□□ 0.71
XRCC3-209ENST00000554913 RABL6Q3YEC7 729 aaPredicted RBP19.47■□□□□ 0.71
XRCC3-209ENST00000554913 ZNF592Q92610 1267 aa19.47■□□□□ 0.71
XRCC3-209ENST00000554913 KBTBD3Q8NAB2 608 aa19.46■□□□□ 0.71
XRCC3-209ENST00000554913 CCDC112Q8NEF3 446 aa19.46■□□□□ 0.71
XRCC3-209ENST00000554913 MRFAP1L1Q96HT8 127 aa19.46■□□□□ 0.71
XRCC3-209ENST00000554913 C5P01031 1676 aa19.46■□□□□ 0.71
XRCC3-209ENST00000554913 CTAGE5O15320 804 aa19.46■□□□□ 0.71
XRCC3-209ENST00000554913 NAP1L2Q9ULW6 460 aaPredicted RBP19.46■□□□□ 0.71
XRCC3-209ENST00000554913 PAXBP1Q9Y5B6 917 aa19.46■□□□□ 0.71
XRCC3-209ENST00000554913 RFX7Q2KHR2 1363 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 A0A087WZG4 1122 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 CCDC73Q6ZRK6 1079 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 DHX40Q8IX18 779 aaKnown RBP19.45■□□□□ 0.7
XRCC3-209ENST00000554913 BECN2A8MW95 431 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 GOLIM4O00461 696 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 CEP135Q66GS9 1140 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 CHST3Q7LGC8 479 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 FILIP1Q7Z7B0 1213 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 ENGASEQ8NFI3 743 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 FBXW7Q969H0 707 aa19.45■□□□□ 0.7
XRCC3-209ENST00000554913 KDM6AO15550 1401 aaPredicted RBP19.45■□□□□ 0.7
XRCC3-209ENST00000554913 KINO60870 393 aaKnown RBP19.44■□□□□ 0.7
XRCC3-209ENST00000554913 HMGB1P09429 215 aaKnown RBP19.44■□□□□ 0.7
XRCC3-209ENST00000554913 EXOSC10Q01780 885 aaKnown RBP19.44■□□□□ 0.7
XRCC3-209ENST00000554913 ILDR1Q86SU0 546 aaPredicted RBP19.44■□□□□ 0.7
XRCC3-209ENST00000554913 SH3TC1Q8TE82 1336 aa19.44■□□□□ 0.7
XRCC3-209ENST00000554913 SKILP12757 684 aa19.44■□□□□ 0.7
XRCC3-209ENST00000554913 SYCP1Q15431 976 aa19.44■□□□□ 0.7
XRCC3-209ENST00000554913 FSIP1Q8NA03 581 aa19.44■□□□□ 0.7
XRCC3-209ENST00000554913 NEUROD6Q96NK8 337 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms