RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 C2orf69Q8N8R5 385 aa31.39■■■□□ 2.62
FOXA1-204ENST00000554607 MBIPQ9NS73 344 aa31.39■■■□□ 2.62
FOXA1-204ENST00000554607 RBM26Q5T8P6 1007 aaKnown RBP31.38■■■□□ 2.61
FOXA1-204ENST00000554607 PODXL2Q9NZ53 605 aa31.38■■■□□ 2.61
FOXA1-204ENST00000554607 G3V3G9 751 aa31.37■■■□□ 2.61
FOXA1-204ENST00000554607 DCAF8Q5TAQ9 597 aa31.37■■■□□ 2.61
FOXA1-204ENST00000554607 RGMBQ6NW40 437 aa31.37■■■□□ 2.61
FOXA1-204ENST00000554607 GBA2Q9HCG7 927 aaPredicted RBP31.37■■■□□ 2.61
FOXA1-204ENST00000554607 KCNQ5Q9NR82 932 aa31.37■■■□□ 2.61
FOXA1-204ENST00000554607 RTL9Q8NET4 1388 aa31.36■■■□□ 2.61
FOXA1-204ENST00000554607 EGFRP00533 1210 aa31.36■■■□□ 2.61
FOXA1-204ENST00000554607 RGS19P49795 217 aa31.36■■■□□ 2.61
FOXA1-204ENST00000554607 CCDC102AQ96A19 550 aa31.36■■■□□ 2.61
FOXA1-204ENST00000554607 VIL1P09327 827 aaKnown RBP31.35■■■□□ 2.61
FOXA1-204ENST00000554607 MLLT1Q03111 559 aaPredicted RBP31.35■■■□□ 2.61
FOXA1-204ENST00000554607 MCOLN1Q9GZU1 580 aa31.35■■■□□ 2.61
FOXA1-204ENST00000554607 ANKIB1Q9P2G1 1089 aa31.35■■■□□ 2.61
FOXA1-204ENST00000554607 ZNF853P0CG23 659 aa31.34■■■□□ 2.61
FOXA1-204ENST00000554607 CALD1Q05682 793 aaKnown RBP31.34■■■□□ 2.61
FOXA1-204ENST00000554607 KIF4BQ2VIQ3 1234 aa31.34■■■□□ 2.61
FOXA1-204ENST00000554607 DLK2Q6UY11 383 aa31.34■■■□□ 2.61
FOXA1-204ENST00000554607 CASP8AP2Q9UKL3 1982 aa31.34■■■□□ 2.61
FOXA1-204ENST00000554607 UFL1O94874 794 aa31.33■■■□□ 2.61
FOXA1-204ENST00000554607 CCDC152Q4G0S7 254 aa31.33■■■□□ 2.61
FOXA1-204ENST00000554607 CCDC191Q8NCU4 936 aa31.33■■■□□ 2.61
FOXA1-204ENST00000554607 ZIC5Q96T25 663 aa31.33■■■□□ 2.61
FOXA1-204ENST00000554607 SEC31BQ9NQW1 1179 aa31.33■■■□□ 2.61
FOXA1-204ENST00000554607 GGA1Q9UJY5 639 aa31.33■■■□□ 2.61
FOXA1-204ENST00000554607 POLR2AP24928 1970 aaKnown RBP31.33■■■□□ 2.61
FOXA1-204ENST00000554607 ADM5C9JUS6 153 aa31.32■■■□□ 2.6
FOXA1-204ENST00000554607 GNAI1P63096 354 aa31.32■■■□□ 2.6
FOXA1-204ENST00000554607 SULF1Q8IWU6 871 aa31.32■■■□□ 2.6
FOXA1-204ENST00000554607 CHMP4AQ9BY43 222 aa31.32■■■□□ 2.6
FOXA1-204ENST00000554607 PHAXQ9H814 394 aaKnown RBP31.32■■■□□ 2.6
FOXA1-204ENST00000554607 IFT57Q9NWB7 429 aa31.32■■■□□ 2.6
FOXA1-204ENST00000554607 PDE8AO60658 829 aa31.31■■■□□ 2.6
FOXA1-204ENST00000554607 PCCAP05165 728 aaPredicted RBP31.31■■■□□ 2.6
FOXA1-204ENST00000554607 MYD88Q99836 296 aa31.31■■■□□ 2.6
FOXA1-204ENST00000554607 COL4A1P02462 1669 aa31.31■■■□□ 2.6
FOXA1-204ENST00000554607 FAM155AB1AL88 458 aaPredicted RBP31.3■■■□□ 2.6
FOXA1-204ENST00000554607 ZNF157P51786 506 aaPredicted RBP31.3■■■□□ 2.6
FOXA1-204ENST00000554607 DGKZQ13574 1117 aa31.3■■■□□ 2.6
FOXA1-204ENST00000554607 AGBL3Q8NEM8 1001 aa31.29■■■□□ 2.6
FOXA1-204ENST00000554607 CWC25Q9NXE8 425 aaPredicted RBP31.29■■■□□ 2.6
FOXA1-204ENST00000554607 SAGE1Q9NXZ1 904 aa31.29■■■□□ 2.6
FOXA1-204ENST00000554607 DDX58O95786 925 aaKnown RBP31.28■■■□□ 2.6
FOXA1-204ENST00000554607 GGA3Q9NZ52 723 aa31.28■■■□□ 2.6
FOXA1-204ENST00000554607 ELL2O00472 640 aaPredicted RBP31.27■■■□□ 2.6
FOXA1-204ENST00000554607 KIF23Q02241 960 aaPredicted RBP31.27■■■□□ 2.6
FOXA1-204ENST00000554607 ZNF280AP59817 542 aaPredicted RBP31.26■■■□□ 2.59
FOXA1-204ENST00000554607 RSBN1LQ6PCB5 846 aaPredicted RBP31.26■■■□□ 2.59
FOXA1-204ENST00000554607 ANKRD18AQ8IVF6 992 aa31.26■■■□□ 2.59
FOXA1-204ENST00000554607 ZNF609O15014 1411 aa31.25■■■□□ 2.59
FOXA1-204ENST00000554607 SCN9AQ15858 1988 aa31.25■■■□□ 2.59
FOXA1-204ENST00000554607 APAF1O14727 1248 aa31.25■■■□□ 2.59
FOXA1-204ENST00000554607 METTL22Q9BUU2 404 aaPredicted RBP31.25■■■□□ 2.59
FOXA1-204ENST00000554607 XDHP47989 1333 aa31.24■■■□□ 2.59
FOXA1-204ENST00000554607 ATP2B4P23634 1241 aa31.23■■■□□ 2.59
FOXA1-204ENST00000554607 SCARF1Q14162 830 aa31.23■■■□□ 2.59
FOXA1-204ENST00000554607 CCDC30Q5VVM6 783 aa31.23■■■□□ 2.59
FOXA1-204ENST00000554607 CDCA5Q96FF9 252 aa31.23■■■□□ 2.59
FOXA1-204ENST00000554607 SLC10A3P09131 477 aa31.22■■■□□ 2.59
FOXA1-204ENST00000554607 PODNQ7Z5L7 613 aa31.22■■■□□ 2.59
FOXA1-204ENST00000554607 REM2Q8IYK8 340 aaPredicted RBP31.22■■■□□ 2.59
FOXA1-204ENST00000554607 CCDC85AQ96PX6 553 aaPredicted RBP31.22■■■□□ 2.59
FOXA1-204ENST00000554607 USP17L8P0C7I0 530 aa31.21■■■□□ 2.59
FOXA1-204ENST00000554607 ANGEL2Q5VTE6 544 aaKnown RBP31.21■■■□□ 2.59
FOXA1-204ENST00000554607 C8orf58Q8NAV2 365 aa31.21■■■□□ 2.59
FOXA1-204ENST00000554607 CDC5LQ99459 802 aaKnown RBP31.21■■■□□ 2.59
FOXA1-204ENST00000554607 RNF186Q9NXI6 227 aa31.21■■■□□ 2.59
FOXA1-204ENST00000554607 ASTN2O75129 1339 aaPredicted RBP31.21■■■□□ 2.59
FOXA1-204ENST00000554607 FKBP1BP68106 108 aa31.2■■■□□ 2.59
FOXA1-204ENST00000554607 JARID2Q92833 1246 aaPredicted RBP31.2■■■□□ 2.59
FOXA1-204ENST00000554607 PRKRIP1Q9H875 184 aaPredicted RBP31.2■■■□□ 2.59
FOXA1-204ENST00000554607 USP17L3A6NCW0 530 aa31.19■■■□□ 2.58
FOXA1-204ENST00000554607 USP17L4A6NCW7 530 aa31.19■■■□□ 2.58
FOXA1-204ENST00000554607 TRPA1O75762 1119 aa31.19■■■□□ 2.58
FOXA1-204ENST00000554607 USP17L1Q7RTZ2 530 aa31.19■■■□□ 2.58
FOXA1-204ENST00000554607 GMLQ99445 158 aa31.19■■■□□ 2.58
FOXA1-204ENST00000554607 MYOZ2Q9NPC6 264 aa31.19■■■□□ 2.58
FOXA1-204ENST00000554607 MAP3K2Q9Y2U5 619 aa31.18■■■□□ 2.58
FOXA1-204ENST00000554607 PITPNM2Q9BZ72 1349 aa31.18■■■□□ 2.58
FOXA1-204ENST00000554607 CSRNP1Q96S65 589 aa31.17■■■□□ 2.58
FOXA1-204ENST00000554607 CTSWP56202 376 aa31.16■■■□□ 2.58
FOXA1-204ENST00000554607 KSR2Q6VAB6 950 aa31.16■■■□□ 2.58
FOXA1-204ENST00000554607 AKAP11Q9UKA4 1901 aa31.16■■■□□ 2.58
FOXA1-204ENST00000554607 PSME4Q14997 1843 aa31.15■■■□□ 2.58
FOXA1-204ENST00000554607 SLC34A2O95436 690 aa31.15■■■□□ 2.58
FOXA1-204ENST00000554607 BSDC1Q9NW68 430 aaPredicted RBP31.15■■■□□ 2.58
FOXA1-204ENST00000554607 NEXNQ0ZGT2 675 aa31.14■■■□□ 2.58
FOXA1-204ENST00000554607 RASAL3Q86YV0 1011 aa31.13■■■□□ 2.57
FOXA1-204ENST00000554607 TTLL11Q8NHH1 800 aa31.13■■■□□ 2.57
FOXA1-204ENST00000554607 PI4KAP2A4QPH2 592 aa31.12■■■□□ 2.57
FOXA1-204ENST00000554607 PI4KAP1Q8N8J0 262 aa31.12■■■□□ 2.57
FOXA1-204ENST00000554607 MINPP1Q9UNW1 487 aa31.12■■■□□ 2.57
FOXA1-204ENST00000554607 MED23Q9ULK4 1368 aa31.12■■■□□ 2.57
FOXA1-204ENST00000554607 IGKV5-2P06315 115 aa31.11■■■□□ 2.57
FOXA1-204ENST00000554607 OGFOD1Q8N543 542 aa31.11■■■□□ 2.57
FOXA1-204ENST00000554607 STK31Q9BXU1 1019 aa31.11■■■□□ 2.57
FOXA1-204ENST00000554607 PAPPA2Q9BXP8 1791 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms