RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 PROM2Q8N271 834 aa11.16□□□□□ -0.62
LINC00520-202ENST00000554196 DIAPH3Q9NSV4 1193 aa11.16□□□□□ -0.62
LINC00520-202ENST00000554196 DBNLQ9UJU6 430 aaKnown RBP11.16□□□□□ -0.62
LINC00520-202ENST00000554196 LAMA4Q16363 1823 aa11.16□□□□□ -0.62
LINC00520-202ENST00000554196 MAST2Q6P0Q8 1798 aa11.16□□□□□ -0.62
LINC00520-202ENST00000554196 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
LINC00520-202ENST00000554196 LRRC37AA6NMS7 1700 aa11.15□□□□□ -0.62
LINC00520-202ENST00000554196 MROH5Q6ZUA9 1318 aa11.15□□□□□ -0.62
LINC00520-202ENST00000554196 CCDC88AQ3V6T2 1871 aa11.15□□□□□ -0.62
LINC00520-202ENST00000554196 SSFA2P28290 1259 aa11.15□□□□□ -0.62
LINC00520-202ENST00000554196 FAM182BQ5T319 152 aa11.15□□□□□ -0.62
LINC00520-202ENST00000554196 CCDC8Q9H0W5 538 aaPredicted RBP11.15□□□□□ -0.62
LINC00520-202ENST00000554196 GREM2Q9H772 168 aa11.15□□□□□ -0.62
LINC00520-202ENST00000554196 KIAA1551Q9HCM1 1747 aa11.15□□□□□ -0.63
LINC00520-202ENST00000554196 RXRBP28702 533 aa11.14□□□□□ -0.63
LINC00520-202ENST00000554196 RABEP1Q15276 862 aa11.14□□□□□ -0.63
LINC00520-202ENST00000554196 HSCBQ8IWL3 235 aa11.14□□□□□ -0.63
LINC00520-202ENST00000554196 FBXO41Q8TF61 875 aa11.14□□□□□ -0.63
LINC00520-202ENST00000554196 SNX21Q969T3 373 aa11.14□□□□□ -0.63
LINC00520-202ENST00000554196 CDC5LQ99459 802 aaKnown RBP11.14□□□□□ -0.63
LINC00520-202ENST00000554196 USP26Q9BXU7 913 aa11.14□□□□□ -0.63
LINC00520-202ENST00000554196 CNNM1Q9NRU3 951 aa11.14□□□□□ -0.63
LINC00520-202ENST00000554196 TLR7Q9NYK1 1049 aaKnown RBP11.14□□□□□ -0.63
LINC00520-202ENST00000554196 ANKRD31Q8N7Z5 1873 aa11.14□□□□□ -0.63
LINC00520-202ENST00000554196 DUOX1Q9NRD9 1551 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 A0A1B0GUL7 405 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 SGSM2O43147 1006 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 RFC4P35249 363 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 IGHMBP2P38935 993 aaKnown RBP11.13□□□□□ -0.63
LINC00520-202ENST00000554196 ANAPC15P60006 121 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 LRRFIP1Q32MZ4 808 aaKnown RBP11.13□□□□□ -0.63
LINC00520-202ENST00000554196 LRRC24Q50LG9 513 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 METTL24Q5JXM2 366 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 USPL1Q5W0Q7 1092 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 LDHAL6AQ6ZMR3 332 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 ZNF594Q96JF6 807 aaPredicted RBP11.13□□□□□ -0.63
LINC00520-202ENST00000554196 SETDB2Q96T68 719 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 HAUS7Q99871 368 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 DBNDD2Q9BQY9 259 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 BCL2L12Q9HB09 334 aa11.13□□□□□ -0.63
LINC00520-202ENST00000554196 PLSCR1O15162 318 aa11.12□□□□□ -0.63
LINC00520-202ENST00000554196 TRIM37O94972 964 aa11.12□□□□□ -0.63
LINC00520-202ENST00000554196 SF3B3Q15393 1217 aaKnown RBP11.12□□□□□ -0.63
LINC00520-202ENST00000554196 ATP2B3Q16720 1220 aa11.12□□□□□ -0.63
LINC00520-202ENST00000554196 CCDC158Q5M9N0 1113 aa11.12□□□□□ -0.63
LINC00520-202ENST00000554196 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
LINC00520-202ENST00000554196 FSD1Q9BTV5 496 aa11.12□□□□□ -0.63
LINC00520-202ENST00000554196 SNRKQ9NRH2 765 aa11.12□□□□□ -0.63
LINC00520-202ENST00000554196 RIPOR2Q9Y4F9 1068 aa11.12□□□□□ -0.63
LINC00520-202ENST00000554196 MED23Q9ULK4 1368 aa11.12□□□□□ -0.63
LINC00520-202ENST00000554196 CACNA1SQ13698 1873 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
LINC00520-202ENST00000554196 KCNQ4P56696 695 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
LINC00520-202ENST00000554196 TBC1D9BQ66K14 1250 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 TPTE2Q6XPS3 522 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 NBPF5PQ86XG9 351 aaPredicted RBP11.11□□□□□ -0.63
LINC00520-202ENST00000554196 SYNE4Q8N205 404 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 VGLL2Q8N8G2 317 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
LINC00520-202ENST00000554196 ZNF512BQ96KM6 892 aaPredicted RBP11.11□□□□□ -0.63
LINC00520-202ENST00000554196 NEUROD6Q96NK8 337 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 PUS3Q9BZE2 481 aaKnown RBP11.11□□□□□ -0.63
LINC00520-202ENST00000554196 BOLA2Q9H3K6 86 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 ANO2Q9NQ90 1003 aa11.11□□□□□ -0.63
LINC00520-202ENST00000554196 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.11□□□□□ -0.63
LINC00520-202ENST00000554196 PDE8BO95263 885 aa11.1□□□□□ -0.63
LINC00520-202ENST00000554196 MAP4K4O95819 1239 aaPredicted RBP11.1□□□□□ -0.63
LINC00520-202ENST00000554196 IFIT1P09914 478 aaKnown RBP11.1□□□□□ -0.63
LINC00520-202ENST00000554196 SLC5A1P13866 664 aa11.1□□□□□ -0.63
LINC00520-202ENST00000554196 HCLS1P14317 486 aaPredicted RBP11.1□□□□□ -0.63
LINC00520-202ENST00000554196 TXNRD1Q16881 649 aa11.1□□□□□ -0.63
LINC00520-202ENST00000554196 TTC39AQ5SRH9 613 aa11.1□□□□□ -0.63
LINC00520-202ENST00000554196 GORABQ5T7V8 394 aa11.1□□□□□ -0.63
LINC00520-202ENST00000554196 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
LINC00520-202ENST00000554196 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
LINC00520-202ENST00000554196 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
LINC00520-202ENST00000554196 LRRC4BQ9NT99 713 aa11.1□□□□□ -0.63
LINC00520-202ENST00000554196 SRP68Q9UHB9 627 aaKnown RBP11.1□□□□□ -0.63
LINC00520-202ENST00000554196 COL4A1P02462 1669 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.09□□□□□ -0.63
LINC00520-202ENST00000554196 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 UQCRFS1P1P0C7P4 283 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 ERFEQ4G0M1 354 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 ANKRD18AQ8IVF6 992 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 KBTBD3Q8NAB2 608 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 FLAD1Q8NFF5 587 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 LPIN2Q92539 896 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 XAGE2Q96GT9 111 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 NLRP3Q96P20 1036 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
LINC00520-202ENST00000554196 KIF2CQ99661 725 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 TBC1D2Q9BYX2 928 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 PAG1Q9NWQ8 432 aa11.09□□□□□ -0.63
LINC00520-202ENST00000554196 COL11A2P13942 1736 aaPredicted RBP11.09□□□□□ -0.63
LINC00520-202ENST00000554196 ST18O60284 1047 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms