RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 KCNB2Q92953 911 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 CABS1Q96KC9 395 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 TRIM6Q9C030 488 aaPredicted RBP11.06□□□□□ -0.64
SIX4-202ENST00000554079 ANO2Q9NQ90 1003 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 RPS6KL1Q9Y6S9 549 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 FAM169AQ9Y6X4 670 aa11.06□□□□□ -0.64
SIX4-202ENST00000554079 CDK12Q9NYV4 1490 aaPredicted RBP11.05□□□□□ -0.64
SIX4-202ENST00000554079 ABCA9Q8IUA7 1624 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 NR1I2O75469 434 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 LARGE1O95461 756 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 CHMLP26374 656 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 HSPA4P34932 840 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 FNTAP49354 379 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 PDE1AP54750 535 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 SETQ01105 290 aaPredicted RBP11.05□□□□□ -0.64
SIX4-202ENST00000554079 GNL2Q13823 731 aaKnown RBP11.05□□□□□ -0.64
SIX4-202ENST00000554079 MCM6Q14566 821 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 WLSQ5T9L3 541 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 GOLGA1Q92805 767 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 DDX11Q96FC9 970 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 RAB21Q9UL25 225 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 L1RE1Q9UN81 338 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 NRXN1Q9ULB1 1477 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
SIX4-202ENST00000554079 EFCAB6Q5THR3 1501 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 RBM5P52756 815 aaKnown RBP eCLIP11.04□□□□□ -0.64
SIX4-202ENST00000554079 AK2P54819 239 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 MPHOSPH8Q99549 860 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 FAM204AQ9H8W3 233 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 LIMCH1Q9UPQ0 1083 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 QRICH2Q9H0J4 1663 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 UGGT1Q9NYU2 1555 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 TSPOAP1O95153 1857 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 EME2A4GXA9 379 aaPredicted RBP11.04□□□□□ -0.64
SIX4-202ENST00000554079 CHUKO15111 745 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 EPB41L2O43491 1005 aaKnown RBP11.04□□□□□ -0.64
SIX4-202ENST00000554079 SHOX2O60902 331 aaPredicted RBP11.04□□□□□ -0.64
SIX4-202ENST00000554079 VAMP4O75379 141 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 NF2P35240 595 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 ICA1Q05084 483 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 STX1AQ16623 288 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 AP1ARQ63HQ0 302 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 ANKZF1Q9H8Y5 726 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 CD248Q9HCU0 757 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 VWDEQ8N2E2 1590 aa11.04□□□□□ -0.64
SIX4-202ENST00000554079 ADCY9O60503 1353 aa11.03□□□□□ -0.64
SIX4-202ENST00000554079 ISM2Q6H9L7 571 aa11.03□□□□□ -0.64
SIX4-202ENST00000554079 CEP85Q6P2H3 762 aa11.03□□□□□ -0.64
SIX4-202ENST00000554079 MSANTD4Q8NCY6 345 aa11.03□□□□□ -0.64
SIX4-202ENST00000554079 CCDC26Q8TAB7 109 aa11.03□□□□□ -0.64
SIX4-202ENST00000554079 BAG1Q99933 345 aaPredicted RBP11.03□□□□□ -0.64
SIX4-202ENST00000554079 SH3GL3Q99963 347 aa11.03□□□□□ -0.64
SIX4-202ENST00000554079 SBNO2Q9Y2G9 1366 aa11.03□□□□□ -0.64
SIX4-202ENST00000554079 ATXN2Q99700 1313 aaKnown RBP11.03□□□□□ -0.64
SIX4-202ENST00000554079 DLG5Q8TDM6 1919 aa11.03□□□□□ -0.64
SIX4-202ENST00000554079 ANKRD18BA2A2Z9 1011 aa11.02□□□□□ -0.64
SIX4-202ENST00000554079 VPS37CA5D8V6 355 aaPredicted RBP11.02□□□□□ -0.64
SIX4-202ENST00000554079 PRPF6O94906 941 aaKnown RBP11.02□□□□□ -0.64
SIX4-202ENST00000554079 SFPQP23246 707 aaKnown RBP eCLIP11.02□□□□□ -0.64
SIX4-202ENST00000554079 ST3GAL1Q11201 340 aa11.02□□□□□ -0.64
SIX4-202ENST00000554079 AMOTL1Q8IY63 956 aa11.02□□□□□ -0.64
SIX4-202ENST00000554079 TEX13AQ9BXU3 409 aaPredicted RBP11.02□□□□□ -0.64
SIX4-202ENST00000554079 IFT172Q9UG01 1749 aa11.02□□□□□ -0.64
SIX4-202ENST00000554079 ODF2LQ9ULJ1 636 aa11.02□□□□□ -0.64
SIX4-202ENST00000554079 KIAA0232Q92628 1395 aa11.02□□□□□ -0.64
SIX4-202ENST00000554079 SAMD9LQ8IVG5 1584 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 PLCH2O75038 1416 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 VWA3AA6NCI4 1184 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 ECM2O94769 699 aaPredicted RBP11.02□□□□□ -0.65
SIX4-202ENST00000554079 IPO7O95373 1038 aaKnown RBP11.02□□□□□ -0.65
SIX4-202ENST00000554079 MYBL2P10244 700 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 INPP5BP32019 993 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 DHX8Q14562 1220 aaKnown RBP11.02□□□□□ -0.65
SIX4-202ENST00000554079 TMC6Q7Z403 805 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 IQCA1Q86XH1 822 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 RPAP2Q8IXW5 612 aaPredicted RBP11.02□□□□□ -0.65
SIX4-202ENST00000554079 AFAP1L1Q8TED9 768 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 LEO1Q8WVC0 666 aaPredicted RBP11.02□□□□□ -0.65
SIX4-202ENST00000554079 KIFC2Q96AC6 838 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 PGBD1Q96JS3 809 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 NUCKS1Q9H1E3 243 aaKnown RBP11.02□□□□□ -0.65
SIX4-202ENST00000554079 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 MAP3K4Q9Y6R4 1608 aa11.02□□□□□ -0.65
SIX4-202ENST00000554079 TRPM2O94759 1503 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 LRRC7Q96NW7 1537 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 CCT5P48643 541 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 CCDC83Q8IWF9 413 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 PNKPQ96T60 521 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
SIX4-202ENST00000554079 SUGCTQ9HAC7 445 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 SNX14Q9Y5W7 946 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 CRYBG1Q9Y4K1 1723 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 CDC42BPGQ6DT37 1551 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 BECN2A8MW95 431 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 MYO1FO00160 1098 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 COQ9O75208 318 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 FSBPO95073 299 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 TSPY4P0CV99 314 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 TSPY10P0CW01 314 aa11.01□□□□□ -0.65
SIX4-202ENST00000554079 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms