RNA–Protein interactions for RNA: ENST00000553991.1

AF111169.3-201, humanhuman

TSL 5 BASIC

Gene AF111169.3, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.3-201ENST00000553991 GPR25O00155 361 aa16.61■□□□□ 0.25
AF111169.3-201ENST00000553991 RIMBP2O15034 1052 aa16.61■□□□□ 0.25
AF111169.3-201ENST00000553991 VIL1P09327 827 aaKnown RBP16.61■□□□□ 0.25
AF111169.3-201ENST00000553991 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
AF111169.3-201ENST00000553991 EYA3Q99504 573 aa16.61■□□□□ 0.25
AF111169.3-201ENST00000553991 KCNQ5Q9NR82 932 aa16.61■□□□□ 0.25
AF111169.3-201ENST00000553991 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
AF111169.3-201ENST00000553991 THUMPD2Q9BTF0 503 aaKnown RBP16.6■□□□□ 0.25
AF111169.3-201ENST00000553991 POLLQ9UGP5 575 aa16.6■□□□□ 0.25
AF111169.3-201ENST00000553991 ASTN2O75129 1339 aaPredicted RBP16.6■□□□□ 0.25
AF111169.3-201ENST00000553991 HTTP42858 3142 aa16.6■□□□□ 0.25
AF111169.3-201ENST00000553991 TM4SF4P48230 202 aa16.59■□□□□ 0.25
AF111169.3-201ENST00000553991 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
AF111169.3-201ENST00000553991 SCARF1Q14162 830 aa16.59■□□□□ 0.25
AF111169.3-201ENST00000553991 PDIA6Q15084 440 aa16.59■□□□□ 0.25
AF111169.3-201ENST00000553991 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
AF111169.3-201ENST00000553991 ANGEL2Q5VTE6 544 aaKnown RBP16.59■□□□□ 0.25
AF111169.3-201ENST00000553991 ANKRD36CQ5JPF3 1778 aa16.59■□□□□ 0.25
AF111169.3-201ENST00000553991 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
AF111169.3-201ENST00000553991 POLR2AP24928 1970 aaKnown RBP16.58■□□□□ 0.25
AF111169.3-201ENST00000553991 TCIRG1Q13488 830 aa16.58■□□□□ 0.24
AF111169.3-201ENST00000553991 NECTIN2Q92692 538 aa16.58■□□□□ 0.24
AF111169.3-201ENST00000553991 TSPYL4Q9UJ04 414 aa16.58■□□□□ 0.24
AF111169.3-201ENST00000553991 PITPNM2Q9BZ72 1349 aa16.58■□□□□ 0.24
AF111169.3-201ENST00000553991 LRRC37AA6NMS7 1700 aa16.58■□□□□ 0.24
AF111169.3-201ENST00000553991 ZNF609O15014 1411 aa16.57■□□□□ 0.24
AF111169.3-201ENST00000553991 FKTNO75072 461 aa16.57■□□□□ 0.24
AF111169.3-201ENST00000553991 GPSM2P81274 684 aa16.57■□□□□ 0.24
AF111169.3-201ENST00000553991 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
AF111169.3-201ENST00000553991 AGBL3Q8NEM8 1001 aa16.57■□□□□ 0.24
AF111169.3-201ENST00000553991 CFHR5Q9BXR6 569 aa16.57■□□□□ 0.24
AF111169.3-201ENST00000553991 EIF2S2P20042 333 aaKnown RBP16.56■□□□□ 0.24
AF111169.3-201ENST00000553991 FXR1P51114 621 aaKnown RBP eCLIP16.56■□□□□ 0.24
AF111169.3-201ENST00000553991 SREBF2Q12772 1141 aa16.56■□□□□ 0.24
AF111169.3-201ENST00000553991 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
AF111169.3-201ENST00000553991 TBC1D16Q8TBP0 767 aa16.56■□□□□ 0.24
AF111169.3-201ENST00000553991 CELF1Q92879 486 aaKnown RBP16.56■□□□□ 0.24
AF111169.3-201ENST00000553991 ZC3H12CQ9C0D7 883 aaKnown RBP16.56■□□□□ 0.24
AF111169.3-201ENST00000553991 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
AF111169.3-201ENST00000553991 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
AF111169.3-201ENST00000553991 SF3B3Q15393 1217 aaKnown RBP16.55■□□□□ 0.24
AF111169.3-201ENST00000553991 NEUROD2Q15784 382 aa16.55■□□□□ 0.24
AF111169.3-201ENST00000553991 MOB2Q70IA6 237 aa16.55■□□□□ 0.24
AF111169.3-201ENST00000553991 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
AF111169.3-201ENST00000553991 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
AF111169.3-201ENST00000553991 LAMB2P55268 1798 aa16.55■□□□□ 0.24
AF111169.3-201ENST00000553991 G3V3G9 751 aa16.54■□□□□ 0.24
AF111169.3-201ENST00000553991 ANXA1P04083 346 aa16.54■□□□□ 0.24
AF111169.3-201ENST00000553991 DCAF8Q5TAQ9 597 aa16.54■□□□□ 0.24
AF111169.3-201ENST00000553991 RSBN1LQ6PCB5 846 aaPredicted RBP16.54■□□□□ 0.24
AF111169.3-201ENST00000553991 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
AF111169.3-201ENST00000553991 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
AF111169.3-201ENST00000553991 AIMP1Q12904 312 aaKnown RBP16.53■□□□□ 0.24
AF111169.3-201ENST00000553991 MYOZ2Q9NPC6 264 aa16.53■□□□□ 0.24
AF111169.3-201ENST00000553991 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
AF111169.3-201ENST00000553991 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
AF111169.3-201ENST00000553991 CHL1O00533 1208 aa16.52■□□□□ 0.24
AF111169.3-201ENST00000553991 USP17L8P0C7I0 530 aa16.52■□□□□ 0.24
AF111169.3-201ENST00000553991 TTLL12Q14166 644 aaPredicted RBP16.52■□□□□ 0.24
AF111169.3-201ENST00000553991 GMLQ99445 158 aa16.52■□□□□ 0.24
AF111169.3-201ENST00000553991 DDX60Q8IY21 1712 aaKnown RBP16.52■□□□□ 0.24
AF111169.3-201ENST00000553991 CENPFP49454 3210 aa16.52■□□□□ 0.23
AF111169.3-201ENST00000553991 APAF1O14727 1248 aa16.51■□□□□ 0.23
AF111169.3-201ENST00000553991 UFL1O94874 794 aa16.51■□□□□ 0.23
AF111169.3-201ENST00000553991 ALDH1A1P00352 501 aa16.51■□□□□ 0.23
AF111169.3-201ENST00000553991 NF2P35240 595 aa16.51■□□□□ 0.23
AF111169.3-201ENST00000553991 RPS8P62241 208 aaKnown RBP16.51■□□□□ 0.23
AF111169.3-201ENST00000553991 MKRN3Q13064 507 aaKnown RBP16.51■□□□□ 0.23
AF111169.3-201ENST00000553991 R3HDMLQ9H3Y0 253 aa16.51■□□□□ 0.23
AF111169.3-201ENST00000553991 HOXB7P09629 217 aa16.5■□□□□ 0.23
AF111169.3-201ENST00000553991 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
AF111169.3-201ENST00000553991 FAM89AQ96GI7 184 aa16.5■□□□□ 0.23
AF111169.3-201ENST00000553991 ANKIB1Q9P2G1 1089 aa16.5■□□□□ 0.23
AF111169.3-201ENST00000553991 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
AF111169.3-201ENST00000553991 TRIM17Q9Y577 477 aa16.5■□□□□ 0.23
AF111169.3-201ENST00000553991 TAF1P21675 1872 aa16.5■□□□□ 0.23
AF111169.3-201ENST00000553991 KIAA0100Q14667 2235 aaKnown RBP16.49■□□□□ 0.23
AF111169.3-201ENST00000553991 CCDC184Q52MB2 194 aa16.49■□□□□ 0.23
AF111169.3-201ENST00000553991 PRAMEF18Q5VWM3 479 aa16.49■□□□□ 0.23
AF111169.3-201ENST00000553991 OTOP1Q7RTM1 612 aa16.49■□□□□ 0.23
AF111169.3-201ENST00000553991 IFT57Q9NWB7 429 aa16.49■□□□□ 0.23
AF111169.3-201ENST00000553991 SCN9AQ15858 1988 aa16.49■□□□□ 0.23
AF111169.3-201ENST00000553991 BRCA2P51587 3418 aa16.48■□□□□ 0.23
AF111169.3-201ENST00000553991 CCDC27Q2M243 656 aa16.48■□□□□ 0.23
AF111169.3-201ENST00000553991 ZNF428Q96B54 188 aa16.48■□□□□ 0.23
AF111169.3-201ENST00000553991 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
AF111169.3-201ENST00000553991 USP17L3A6NCW0 530 aa16.47■□□□□ 0.23
AF111169.3-201ENST00000553991 USP17L4A6NCW7 530 aa16.47■□□□□ 0.23
AF111169.3-201ENST00000553991 GNAI1P63096 354 aa16.47■□□□□ 0.23
AF111169.3-201ENST00000553991 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
AF111169.3-201ENST00000553991 USP17L1Q7RTZ2 530 aa16.47■□□□□ 0.23
AF111169.3-201ENST00000553991 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
AF111169.3-201ENST00000553991 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
AF111169.3-201ENST00000553991 ISCA1Q9BUE6 129 aa16.47■□□□□ 0.23
AF111169.3-201ENST00000553991 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
AF111169.3-201ENST00000553991 IRS4O14654 1257 aaPredicted RBP16.46■□□□□ 0.23
AF111169.3-201ENST00000553991 INHBEP58166 350 aa16.46■□□□□ 0.23
AF111169.3-201ENST00000553991 NBPF9Q3BBW0 867 aa16.46■□□□□ 0.23
AF111169.3-201ENST00000553991 SPRYD7Q5W111 196 aa16.46■□□□□ 0.23
AF111169.3-201ENST00000553991 PODNQ7Z5L7 613 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms