RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 EFCC1Q9HA90 598 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 DNAJB12Q9NXW2 375 aaKnown RBP5.42□□□□□ -1.54
SLIRP-202ENST00000553981 DMGDHQ9UI17 866 aaKnown RBP5.42□□□□□ -1.54
SLIRP-202ENST00000553981 NAGPAQ9UK23 515 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 BCS1LQ9Y276 419 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.42□□□□□ -1.54
SLIRP-202ENST00000553981 ZMYM4Q5VZL5 1548 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 DENND4BO75064 1496 aaPredicted RBP5.41□□□□□ -1.54
SLIRP-202ENST00000553981 SCO2A0A1W2PP80 73 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 TGFBR3LH3BV60 316 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 LGR5O75473 907 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 AFF1P51825 1210 aaKnown RBP5.41□□□□□ -1.54
SLIRP-202ENST00000553981 CCINQ13939 588 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 PRSS36Q5K4E3 855 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 PSAPL1Q6NUJ1 521 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 SHISA2Q6UWI4 295 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 FNBP4Q8N3X1 1017 aaPredicted RBP5.41□□□□□ -1.54
SLIRP-202ENST00000553981 CLUAP1Q96AJ1 413 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 LENG1Q96BZ8 264 aaPredicted RBP5.41□□□□□ -1.54
SLIRP-202ENST00000553981 PNMA5Q96PV4 448 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 HINFPQ9BQA5 517 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 ARID4BQ4LE39 1312 aaPredicted RBP5.41□□□□□ -1.54
SLIRP-202ENST00000553981 PHLDB1Q86UU1 1377 aa5.41□□□□□ -1.54
SLIRP-202ENST00000553981 LRRIQ1Q96JM4 1722 aa5.4□□□□□ -1.54
SLIRP-202ENST00000553981 FANCAO15360 1455 aa5.4□□□□□ -1.54
SLIRP-202ENST00000553981 ARHGEF12Q9NZN5 1544 aa5.4□□□□□ -1.54
SLIRP-202ENST00000553981 NFKB1P19838 968 aa5.4□□□□□ -1.54
SLIRP-202ENST00000553981 GRNP28799 593 aaKnown RBP5.4□□□□□ -1.54
SLIRP-202ENST00000553981 RAC1P63000 192 aa5.4□□□□□ -1.54
SLIRP-202ENST00000553981 PTK7Q13308 1070 aa5.4□□□□□ -1.54
SLIRP-202ENST00000553981 CRTC2Q53ET0 693 aaPredicted RBP5.4□□□□□ -1.54
SLIRP-202ENST00000553981 TXNRD3Q86VQ6 643 aa5.4□□□□□ -1.54
SLIRP-202ENST00000553981 DMRTC2Q8IXT2 367 aaPredicted RBP5.4□□□□□ -1.54
SLIRP-202ENST00000553981 FER1L4A9Z1Z3 1794 aa5.39□□□□□ -1.55
SLIRP-202ENST00000553981 ZFYVE16Q7Z3T8 1539 aa5.39□□□□□ -1.55
SLIRP-202ENST00000553981 KIF14Q15058 1648 aa5.39□□□□□ -1.55
SLIRP-202ENST00000553981 RGS9O75916 674 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-202ENST00000553981 H2AFB1P0C5Y9 115 aa5.39□□□□□ -1.55
SLIRP-202ENST00000553981 H2AFB2P0C5Z0 115 aa5.39□□□□□ -1.55
SLIRP-202ENST00000553981 IGFBP4P22692 258 aa5.39□□□□□ -1.55
SLIRP-202ENST00000553981 NRG1Q02297 640 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-202ENST00000553981 DPYDQ12882 1025 aa5.39□□□□□ -1.55
SLIRP-202ENST00000553981 KANK4Q5T7N3 995 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-202ENST00000553981 LARP1Q6PKG0 1096 aaKnown RBP5.39□□□□□ -1.55
SLIRP-202ENST00000553981 PROSER2Q86WR7 435 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-202ENST00000553981 FMR1NBQ8N0W7 255 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-202ENST00000553981 SCAPERQ9BY12 1400 aa5.39□□□□□ -1.55
SLIRP-202ENST00000553981 LTBP4Q8N2S1 1624 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 EPB42P16452 691 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 IDH3AP50213 366 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 ARTNQ5T4W7 220 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 FAM35AQ86V20 835 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 AFAP1Q8N556 730 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 ZFP64Q9NPA5 681 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 KLK14Q9P0G3 267 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 PLCH2O75038 1416 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 POGZQ7Z3K3 1410 aa5.38□□□□□ -1.55
SLIRP-202ENST00000553981 FAM196BA6NMK8 535 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L15C9J2P7 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L10C9JJH3 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L13C9JLJ4 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L12C9JPN9 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L11C9JVI0 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L21D6R901 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L18D6R9N7 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L22D6RA61 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L17D6RBQ6 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L19D6RCP7 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L20D6RJB6 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 CPB1P15086 417 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 INPP5BP32019 993 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP17L24Q0WX57 530 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 GRIK5Q16478 980 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 MSL1Q68DK7 614 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 KRT25Q7Z3Z0 450 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 ANKMY2Q8IV38 441 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 FAM9AQ8IZU1 332 aaPredicted RBP5.37□□□□□ -1.55
SLIRP-202ENST00000553981 TP53INP1Q96A56 240 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 LPIN3Q9BQK8 851 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 SSBP4Q9BWG4 385 aaPredicted RBP5.37□□□□□ -1.55
SLIRP-202ENST00000553981 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 PPP1R12CQ9BZL4 782 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 ZFATQ9P243 1243 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 USP21Q9UK80 565 aa5.37□□□□□ -1.55
SLIRP-202ENST00000553981 PLEKHD1A6NEE1 506 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-202ENST00000553981 ZBTB42B2RXF5 422 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 MAP3K6O95382 1288 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 TARSP26639 723 aaKnown RBP5.36□□□□□ -1.55
SLIRP-202ENST00000553981 PLAURQ03405 335 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 DGKZQ13574 1117 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 PCSK7Q16549 785 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 PERM1Q5SV97 790 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 DHX32Q7L7V1 743 aaKnown RBP5.36□□□□□ -1.55
SLIRP-202ENST00000553981 IFT43Q96FT9 208 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 QTRT2Q9H974 415 aaKnown RBP5.36□□□□□ -1.55
SLIRP-202ENST00000553981 FRRS1LQ9P0K9 344 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 TRAPPC8Q9Y2L5 1435 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 ATP10AO60312 1499 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 ARHGAP35Q9NRY4 1499 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms