RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 TOGARAM1Q9Y4F4 1720 aa10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 MAP4K1Q92918 833 aa10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 ZBTB9Q96C00 473 aa10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 CCDC9Q9Y3X0 531 aaKnown RBP10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 RPAP1Q9BWH6 1393 aaPredicted RBP10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 TNS2Q63HR2 1409 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 CREB3L3Q68CJ9 461 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 ZSWIM6Q9HCJ5 1215 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 SNRKQ9NRH2 765 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 CWC25Q9NXE8 425 aaPredicted RBP10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 LIMCH1Q9UPQ0 1083 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 TJP1Q07157 1748 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 RIOK3O14730 519 aaKnown RBP10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ATP5JP18859 108 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 GABPB1Q06547 395 aaPredicted RBP10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ATG9AQ7Z3C6 839 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ASAP1Q9ULH1 1129 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ZNF594Q96JF6 807 aaPredicted RBP10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 TMEM63CQ9P1W3 806 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 MED23Q9ULK4 1368 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 HIP1O00291 1037 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 SLC27A2O14975 620 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 ST3GAL1Q11201 340 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TSPY26PQ9H489 355 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 PDRG1Q9NUG6 133 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 BTG4Q9NY30 223 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 ZNF330Q9Y3S2 320 aaPredicted RBP10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 PIGBQ92521 554 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 GDPD2Q9HCC8 539 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TMOD3Q9NYL9 352 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 LRRC24Q50LG9 513 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 VPS53Q5VIR6 699 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 DNAJC10Q8IXB1 793 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 RGS22Q8NE09 1264 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TCEANC2Q96MN5 208 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TM6SF1Q9BZW5 370 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 CYP46A1Q9Y6A2 500 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TAF5LO75529 589 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 TIMM10P62072 90 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 SLFNL1Q499Z3 407 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 CCDC129Q6ZRS4 1044 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 CCDC83Q8IWF9 413 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 USP25Q9UHP3 1055 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 ME3Q16798 604 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 DDX46Q7L014 1031 aaKnown RBP10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 CCDC191Q8NCU4 936 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 ZKSCAN1P17029 563 aaPredicted RBP10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 TPCN1Q9ULQ1 816 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 ZNF609O15014 1411 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 JCADQ9P266 1359 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 SYT1P21579 422 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 NECAB1Q8N987 351 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 NEUROD6Q96NK8 337 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 HAUS7Q99871 368 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 ISCA1Q9BUE6 129 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 ATG3Q9NT62 314 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 WDR33Q9C0J8 1336 aaKnown RBP10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 GADD45BO75293 160 aaPredicted RBP10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 SLFN14P0C7P3 912 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 CCDC85AQ96PX6 553 aaPredicted RBP10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 TCIRG1Q13488 830 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 DHX37Q8IY37 1157 aaKnown RBP10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 SYNE4Q8N205 404 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 SLC4A9Q96Q91 983 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 EYA2O00167 538 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 STX6O43752 255 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 APPP05067 770 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 ZSCAN22P10073 491 aaPredicted RBP10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 GJB2P29033 226 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 ANKRD7Q92527 254 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 SLC20A2Q08357 652 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 USP48Q86UV5 1035 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 CHMP4CQ96CF2 233 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 FAM89AQ96GI7 184 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 TCHHQ07283 1943 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 GOLIM4O00461 696 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 ADCY5O95622 1261 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 MBD3O95983 291 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 IL15P40933 162 aaPredicted RBP10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 TERF2Q15554 542 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 USPL1Q5W0Q7 1092 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 CNPY2Q9Y2B0 182 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 RPS6KB1P23443 525 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 TOB2Q14106 344 aaPredicted RBP10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 HLFQ16534 295 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 KBTBD3Q8NAB2 608 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 ZSCAN31Q96LW9 406 aaPredicted RBP10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 A0A1B0GUL7 405 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 CAPN2P17655 700 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 RNF20Q5VTR2 975 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms