RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 NEURL1BA8MQ27 555 aa11.61□□□□□ -0.55
SDR39U1-207ENST00000553937 TRAF5O00463 557 aa11.61□□□□□ -0.55
SDR39U1-207ENST00000553937 ECE2O60344 883 aa11.61□□□□□ -0.55
SDR39U1-207ENST00000553937 VEGFBP49765 207 aa11.61□□□□□ -0.55
SDR39U1-207ENST00000553937 DOK7Q18PE1 504 aa11.61□□□□□ -0.55
SDR39U1-207ENST00000553937 EYA3Q99504 573 aa11.61□□□□□ -0.55
SDR39U1-207ENST00000553937 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
SDR39U1-207ENST00000553937 ZBTB12Q9Y330 459 aaPredicted RBP11.61□□□□□ -0.55
SDR39U1-207ENST00000553937 RTL9Q8NET4 1388 aa11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 RASSF10A6NK89 507 aa11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 PSMD14O00487 310 aa11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 UFL1O94874 794 aa11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 CTSWP56202 376 aa11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 EXOSC9Q06265 439 aaKnown RBP11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 FLIIQ13045 1269 aa11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 WDR63Q8IWG1 891 aa11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 TRPM4Q8TD43 1214 aa11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 ANKIB1Q9P2G1 1089 aa11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 CNOT7Q9UIV1 285 aaKnown RBP11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 ABT1Q9ULW3 272 aaKnown RBP11.6□□□□□ -0.55
SDR39U1-207ENST00000553937 HIRAP54198 1017 aaPredicted RBP11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 FKBP5Q13451 457 aaPredicted RBP11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 DEFB115Q30KQ5 88 aa11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 UBE3BQ7Z3V4 1068 aa11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 ANKRD18AQ8IVF6 992 aa11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 TTLL11Q8NHH1 800 aa11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 ZC3H12CQ9C0D7 883 aaKnown RBP11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 KCNQ5Q9NR82 932 aa11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 GGA1Q9UJY5 639 aa11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 XDHP47989 1333 aa11.59□□□□□ -0.55
SDR39U1-207ENST00000553937 H7C1D1 291 aa11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 VAMP4O75379 141 aa11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 CST9Q5W186 159 aa11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 DNAAF4Q8WXU2 420 aa11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 DPF2Q92785 391 aa11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 CDC5LQ99459 802 aaKnown RBP11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 GLIS2Q9BZE0 524 aaPredicted RBP11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 GREM2Q9H772 168 aa11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 PGAP2Q9UHJ9 254 aa11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 ECM29Q5VYK3 1845 aa11.58□□□□□ -0.56
SDR39U1-207ENST00000553937 H7C1W4 665 aa11.57□□□□□ -0.56
SDR39U1-207ENST00000553937 FOXN1O15353 648 aa11.57□□□□□ -0.56
SDR39U1-207ENST00000553937 RPS12P25398 132 aaKnown RBP11.57□□□□□ -0.56
SDR39U1-207ENST00000553937 GCKRQ14397 625 aa11.57□□□□□ -0.56
SDR39U1-207ENST00000553937 SAMD7Q7Z3H4 446 aa11.57□□□□□ -0.56
SDR39U1-207ENST00000553937 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
SDR39U1-207ENST00000553937 WDR33Q9C0J8 1336 aaKnown RBP11.57□□□□□ -0.56
SDR39U1-207ENST00000553937 G3V3G9 751 aa11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 ZNF609O15014 1411 aa11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 EGFRP00533 1210 aa11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 TBC1D10BQ4KMP7 808 aaPredicted RBP11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 PAXIP1Q6ZW49 1069 aaPredicted RBP11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 TNS4Q8IZW8 715 aa11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 LINS1Q8NG48 757 aa11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 MYH16Q9H6N6 1097 aa11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 TLL2Q9Y6L7 1015 aa11.56□□□□□ -0.56
SDR39U1-207ENST00000553937 MED23Q9ULK4 1368 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 WTIPA6NIX2 430 aaPredicted RBP11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 CELF2O95319 508 aaKnown RBP11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 ATP2B4P23634 1241 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 CASP7P55210 303 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 HNRNPUQ00839 825 aaKnown RBP eCLIP11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 GRM1Q13255 1194 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 CYP4F22Q6NT55 531 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 CDC37L1Q7L3B6 337 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 AIDAQ96BJ3 306 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 CDCA7LQ96GN5 454 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 CAPNS2Q96L46 248 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 PLA2G12BQ9BX93 195 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 ZNF408Q9H9D4 720 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 BSDC1Q9NW68 430 aaPredicted RBP11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 MINPP1Q9UNW1 487 aa11.55□□□□□ -0.56
SDR39U1-207ENST00000553937 F6X3S4 739 aa11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 VIL1P09327 827 aaKnown RBP11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 ITGA6P23229 1130 aa11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 CCT4P50991 539 aaKnown RBP11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 KIF4BQ2VIQ3 1234 aa11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 FAM161AQ3B820 660 aa11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 DLK2Q6UY11 383 aa11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 WBP1LQ9NX94 342 aa11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 AKAP11Q9UKA4 1901 aa11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 ARAP2Q8WZ64 1704 aa11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
SDR39U1-207ENST00000553937 IGHMBP2P38935 993 aaKnown RBP11.53□□□□□ -0.56
SDR39U1-207ENST00000553937 ECE1P42892 770 aa11.53□□□□□ -0.56
SDR39U1-207ENST00000553937 BEND3Q5T5X7 828 aa11.53□□□□□ -0.56
SDR39U1-207ENST00000553937 RSBN1LQ6PCB5 846 aaPredicted RBP11.53□□□□□ -0.56
SDR39U1-207ENST00000553937 SAPCD2Q86UD0 394 aa11.53□□□□□ -0.56
SDR39U1-207ENST00000553937 USP48Q86UV5 1035 aa11.53□□□□□ -0.56
SDR39U1-207ENST00000553937 ADM5C9JUS6 153 aa11.52□□□□□ -0.57
SDR39U1-207ENST00000553937 CSF1RP07333 972 aa11.52□□□□□ -0.57
SDR39U1-207ENST00000553937 CTCFP49711 727 aaPredicted RBP11.52□□□□□ -0.57
SDR39U1-207ENST00000553937 MAP2K1Q02750 393 aaPredicted RBP11.52□□□□□ -0.57
SDR39U1-207ENST00000553937 KRT26Q7Z3Y9 468 aa11.52□□□□□ -0.57
SDR39U1-207ENST00000553937 PODNQ7Z5L7 613 aa11.52□□□□□ -0.57
SDR39U1-207ENST00000553937 AGBL3Q8NEM8 1001 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms