RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 RTL5Q5HYW3 569 aaPredicted RBP10.52□□□□□ -0.73
RDH11-205ENST00000553816 SLC10A5Q5PT55 438 aa10.52□□□□□ -0.73
RDH11-205ENST00000553816 STYK1Q6J9G0 422 aa10.52□□□□□ -0.73
RDH11-205ENST00000553816 PRPF40BQ6NWY9 871 aaKnown RBP10.52□□□□□ -0.73
RDH11-205ENST00000553816 KSR2Q6VAB6 950 aa10.52□□□□□ -0.73
RDH11-205ENST00000553816 FAM89AQ96GI7 184 aa10.52□□□□□ -0.73
RDH11-205ENST00000553816 PDZRN3Q9UPQ7 1066 aa10.52□□□□□ -0.73
RDH11-205ENST00000553816 SPEF2Q9C093 1822 aa10.51□□□□□ -0.73
RDH11-205ENST00000553816 F6X3S4 739 aa10.51□□□□□ -0.73
RDH11-205ENST00000553816 NFKBIEO00221 500 aa10.51□□□□□ -0.73
RDH11-205ENST00000553816 NPR1P16066 1061 aa10.51□□□□□ -0.73
RDH11-205ENST00000553816 PBX2P40425 430 aa10.51□□□□□ -0.73
RDH11-205ENST00000553816 TRIM28Q13263 835 aaKnown RBP10.51□□□□□ -0.73
RDH11-205ENST00000553816 CWF19L2Q2TBE0 894 aaKnown RBP10.51□□□□□ -0.73
RDH11-205ENST00000553816 CHMP4AQ9BY43 222 aa10.51□□□□□ -0.73
RDH11-205ENST00000553816 DDX58O95786 925 aaKnown RBP10.5□□□□□ -0.73
RDH11-205ENST00000553816 HNRNPUQ00839 825 aaKnown RBP eCLIP10.5□□□□□ -0.73
RDH11-205ENST00000553816 FKBP5Q13451 457 aaPredicted RBP10.5□□□□□ -0.73
RDH11-205ENST00000553816 ZNF784Q8NCA9 323 aaPredicted RBP10.5□□□□□ -0.73
RDH11-205ENST00000553816 C7orf43Q8WVR3 580 aa10.5□□□□□ -0.73
RDH11-205ENST00000553816 CNKSR1Q969H4 720 aa10.5□□□□□ -0.73
RDH11-205ENST00000553816 SH3TC1Q8TE82 1336 aa10.5□□□□□ -0.73
RDH11-205ENST00000553816 SNED1Q8TER0 1413 aa10.5□□□□□ -0.73
RDH11-205ENST00000553816 HOXA10P31260 410 aaPredicted RBP10.49□□□□□ -0.73
RDH11-205ENST00000553816 MRPL50Q8N5N7 158 aaKnown RBP10.49□□□□□ -0.73
RDH11-205ENST00000553816 CCDC191Q8NCU4 936 aa10.49□□□□□ -0.73
RDH11-205ENST00000553816 SSH1Q8WYL5 1049 aa10.49□□□□□ -0.73
RDH11-205ENST00000553816 NLRP3Q96P20 1036 aa10.49□□□□□ -0.73
RDH11-205ENST00000553816 MFRPQ9BY79 579 aa10.49□□□□□ -0.73
RDH11-205ENST00000553816 RNF123Q5XPI4 1314 aa10.49□□□□□ -0.73
RDH11-205ENST00000553816 LRRC37AA6NMS7 1700 aa10.49□□□□□ -0.73
RDH11-205ENST00000553816 NEURL1BA8MQ27 555 aa10.48□□□□□ -0.73
RDH11-205ENST00000553816 IRS4O14654 1257 aaPredicted RBP10.48□□□□□ -0.73
RDH11-205ENST00000553816 ALDH1B1P30837 517 aa10.48□□□□□ -0.73
RDH11-205ENST00000553816 C9orf131Q5VYM1 1079 aa10.48□□□□□ -0.73
RDH11-205ENST00000553816 ZBTB38Q8NAP3 1195 aaPredicted RBP10.48□□□□□ -0.73
RDH11-205ENST00000553816 DNAAF4Q8WXU2 420 aa10.48□□□□□ -0.73
RDH11-205ENST00000553816 RPGRQ92834 1020 aaKnown RBP10.48□□□□□ -0.73
RDH11-205ENST00000553816 BCL2L13Q9BXK5 485 aa10.48□□□□□ -0.73
RDH11-205ENST00000553816 CWC25Q9NXE8 425 aaPredicted RBP10.48□□□□□ -0.73
RDH11-205ENST00000553816 PCDHGA4Q9Y5G9 962 aa10.48□□□□□ -0.73
RDH11-205ENST00000553816 ABCC4O15439 1325 aa10.48□□□□□ -0.73
RDH11-205ENST00000553816 ECM2O94769 699 aaPredicted RBP10.47□□□□□ -0.73
RDH11-205ENST00000553816 PCCAP05165 728 aaPredicted RBP10.47□□□□□ -0.73
RDH11-205ENST00000553816 RBM17Q96I25 401 aaKnown RBP10.47□□□□□ -0.73
RDH11-205ENST00000553816 CRAMP1Q96RY5 1269 aa10.47□□□□□ -0.73
RDH11-205ENST00000553816 HCSTQ9UBK5 93 aa10.47□□□□□ -0.73
RDH11-205ENST00000553816 CASP7P55210 303 aa10.46□□□□□ -0.73
RDH11-205ENST00000553816 SF3B3Q15393 1217 aaKnown RBP10.46□□□□□ -0.73
RDH11-205ENST00000553816 BEND3Q5T5X7 828 aa10.46□□□□□ -0.73
RDH11-205ENST00000553816 ZNF526Q8TF50 670 aaPredicted RBP10.46□□□□□ -0.73
RDH11-205ENST00000553816 RNF181Q9P0P0 153 aa10.46□□□□□ -0.73
RDH11-205ENST00000553816 COL4A5P29400 1685 aa10.46□□□□□ -0.74
RDH11-205ENST00000553816 LTBP1Q14766 1721 aa10.46□□□□□ -0.74
RDH11-205ENST00000553816 CDHR2Q9BYE9 1310 aa10.45□□□□□ -0.74
RDH11-205ENST00000553816 H7C1W4 665 aa10.45□□□□□ -0.74
RDH11-205ENST00000553816 PPEF1O14829 653 aaPredicted RBP10.45□□□□□ -0.74
RDH11-205ENST00000553816 LMNB1P20700 586 aa10.45□□□□□ -0.74
RDH11-205ENST00000553816 NEXNQ0ZGT2 675 aa10.45□□□□□ -0.74
RDH11-205ENST00000553816 GCKRQ14397 625 aa10.45□□□□□ -0.74
RDH11-205ENST00000553816 CCDC93Q567U6 631 aa10.45□□□□□ -0.74
RDH11-205ENST00000553816 ADGRD1Q6QNK2 874 aa10.45□□□□□ -0.74
RDH11-205ENST00000553816 UBE3BQ7Z3V4 1068 aa10.45□□□□□ -0.74
RDH11-205ENST00000553816 CELF1Q92879 486 aaKnown RBP10.45□□□□□ -0.74
RDH11-205ENST00000553816 CCDC85AQ96PX6 553 aaPredicted RBP10.45□□□□□ -0.74
RDH11-205ENST00000553816 SEC31BQ9NQW1 1179 aa10.45□□□□□ -0.74
RDH11-205ENST00000553816 A0A1B0GUL6 1792 aa10.44□□□□□ -0.74
RDH11-205ENST00000553816 DUOX1Q9NRD9 1551 aa10.44□□□□□ -0.74
RDH11-205ENST00000553816 LTBP3Q9NS15 1303 aa10.44□□□□□ -0.74
RDH11-205ENST00000553816 PDE8AO60658 829 aa10.44□□□□□ -0.74
RDH11-205ENST00000553816 ALDH1L2Q3SY69 923 aa10.44□□□□□ -0.74
RDH11-205ENST00000553816 DDX46Q7L014 1031 aaKnown RBP10.44□□□□□ -0.74
RDH11-205ENST00000553816 LINS1Q8NG48 757 aa10.44□□□□□ -0.74
RDH11-205ENST00000553816 TAOK3Q9H2K8 898 aa10.44□□□□□ -0.74
RDH11-205ENST00000553816 ZBED9Q6R2W3 1325 aa10.43□□□□□ -0.74
RDH11-205ENST00000553816 RARSP54136 660 aaKnown RBP10.43□□□□□ -0.74
RDH11-205ENST00000553816 FKBP4Q02790 459 aaKnown RBP eCLIP10.43□□□□□ -0.74
RDH11-205ENST00000553816 GRAPQ13588 217 aa10.43□□□□□ -0.74
RDH11-205ENST00000553816 SLC4A10Q6U841 1118 aa10.43□□□□□ -0.74
RDH11-205ENST00000553816 GRAPLQ8TC17 118 aaPredicted RBP10.43□□□□□ -0.74
RDH11-205ENST00000553816 ZNF277Q9NRM2 450 aaPredicted RBP10.43□□□□□ -0.74
RDH11-205ENST00000553816 SMC4Q9NTJ3 1288 aa10.43□□□□□ -0.74
RDH11-205ENST00000553816 ATP6V0A2Q9Y487 856 aa10.43□□□□□ -0.74
RDH11-205ENST00000553816 STK24Q9Y6E0 443 aa10.43□□□□□ -0.74
RDH11-205ENST00000553816 BBOX1O75936 387 aa10.42□□□□□ -0.74
RDH11-205ENST00000553816 CT47B1P0C2W7 299 aaPredicted RBP10.42□□□□□ -0.74
RDH11-205ENST00000553816 SOGA3Q5TF21 947 aa10.42□□□□□ -0.74
RDH11-205ENST00000553816 SP8Q8IXZ3 490 aa10.42□□□□□ -0.74
RDH11-205ENST00000553816 RTKN2Q8IZC4 609 aa10.42□□□□□ -0.74
RDH11-205ENST00000553816 TTLL11Q8NHH1 800 aa10.42□□□□□ -0.74
RDH11-205ENST00000553816 GREM2Q9H772 168 aa10.42□□□□□ -0.74
RDH11-205ENST00000553816 TNNQ9UQP3 1299 aa10.42□□□□□ -0.74
RDH11-205ENST00000553816 PTPRCP08575 1304 aa10.41□□□□□ -0.74
RDH11-205ENST00000553816 BCAR3O75815 825 aa10.41□□□□□ -0.74
RDH11-205ENST00000553816 SLC34A2O95436 690 aa10.41□□□□□ -0.74
RDH11-205ENST00000553816 CTSWP56202 376 aa10.41□□□□□ -0.74
RDH11-205ENST00000553816 FOXO4P98177 505 aa10.41□□□□□ -0.74
RDH11-205ENST00000553816 EPHA10Q5JZY3 1008 aa10.41□□□□□ -0.74
RDH11-205ENST00000553816 PLA2G12BQ9BX93 195 aa10.41□□□□□ -0.74
RDH11-205ENST00000553816 SRCIN1Q9C0H9 1055 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms