RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 RPS12P25398 132 aaKnown RBP12.76□□□□□ -0.37
ACTN1-210ENST00000553779 MAP2K2P36507 400 aa12.76□□□□□ -0.37
ACTN1-210ENST00000553779 HUNKP57058 714 aa12.76□□□□□ -0.37
ACTN1-210ENST00000553779 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
ACTN1-210ENST00000553779 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
ACTN1-210ENST00000553779 SAPCD2Q86UD0 394 aa12.76□□□□□ -0.37
ACTN1-210ENST00000553779 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
ACTN1-210ENST00000553779 ZBTB38Q8NAP3 1195 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-210ENST00000553779 CCDC85AQ96PX6 553 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-210ENST00000553779 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-210ENST00000553779 GGA1Q9UJY5 639 aa12.76□□□□□ -0.37
ACTN1-210ENST00000553779 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 CA12O43570 354 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 COL4A1P02462 1669 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 NEXNQ0ZGT2 675 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 CCDC30Q5VVM6 783 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 SAMD7Q7Z3H4 446 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 TBC1D16Q8TBP0 767 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 DPF2Q92785 391 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 ABHD8Q96I13 439 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 STK31Q9BXU1 1019 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 PRKRIP1Q9H875 184 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-210ENST00000553779 POLLQ9UGP5 575 aa12.75□□□□□ -0.37
ACTN1-210ENST00000553779 CCDC85CA6NKD9 419 aa12.74□□□□□ -0.37
ACTN1-210ENST00000553779 HIRAP54198 1017 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-210ENST00000553779 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
ACTN1-210ENST00000553779 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
ACTN1-210ENST00000553779 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
ACTN1-210ENST00000553779 C2orf69Q8N8R5 385 aa12.74□□□□□ -0.37
ACTN1-210ENST00000553779 CCDC191Q8NCU4 936 aa12.74□□□□□ -0.37
ACTN1-210ENST00000553779 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
ACTN1-210ENST00000553779 PHAXQ9H814 394 aaKnown RBP12.74□□□□□ -0.37
ACTN1-210ENST00000553779 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
ACTN1-210ENST00000553779 PDE8AO60658 829 aa12.73□□□□□ -0.37
ACTN1-210ENST00000553779 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-210ENST00000553779 NOGQ13253 232 aa12.73□□□□□ -0.37
ACTN1-210ENST00000553779 TRIM28Q13263 835 aaKnown RBP12.73□□□□□ -0.37
ACTN1-210ENST00000553779 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
ACTN1-210ENST00000553779 CDC5LQ99459 802 aaKnown RBP12.73□□□□□ -0.37
ACTN1-210ENST00000553779 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-210ENST00000553779 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
ACTN1-210ENST00000553779 XDHP47989 1333 aa12.72□□□□□ -0.37
ACTN1-210ENST00000553779 ADM5C9JUS6 153 aa12.72□□□□□ -0.37
ACTN1-210ENST00000553779 PCCAP05165 728 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-210ENST00000553779 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-210ENST00000553779 GGA3Q9NZ52 723 aa12.72□□□□□ -0.37
ACTN1-210ENST00000553779 PGAP2Q9UHJ9 254 aa12.72□□□□□ -0.37
ACTN1-210ENST00000553779 MAP3K2Q9Y2U5 619 aa12.72□□□□□ -0.37
ACTN1-210ENST00000553779 RTL9Q8NET4 1388 aa12.71□□□□□ -0.37
ACTN1-210ENST00000553779 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
ACTN1-210ENST00000553779 ZNF157P51786 506 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-210ENST00000553779 METTL22Q9BUU2 404 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-210ENST00000553779 CTSWP56202 376 aa12.7□□□□□ -0.38
ACTN1-210ENST00000553779 RGMBQ6NW40 437 aa12.7□□□□□ -0.38
ACTN1-210ENST00000553779 C8orf58Q8NAV2 365 aa12.7□□□□□ -0.38
ACTN1-210ENST00000553779 KCNQ5Q9NR82 932 aa12.7□□□□□ -0.38
ACTN1-210ENST00000553779 PODXL2Q9NZ53 605 aa12.7□□□□□ -0.38
ACTN1-210ENST00000553779 PAPPA2Q9BXP8 1791 aa12.7□□□□□ -0.38
ACTN1-210ENST00000553779 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
ACTN1-210ENST00000553779 EGFRP00533 1210 aa12.69□□□□□ -0.38
ACTN1-210ENST00000553779 ATP2B4P23634 1241 aa12.69□□□□□ -0.38
ACTN1-210ENST00000553779 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-210ENST00000553779 TSR2Q969E8 191 aaKnown RBP12.69□□□□□ -0.38
ACTN1-210ENST00000553779 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
ACTN1-210ENST00000553779 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 VIL1P09327 827 aaKnown RBP12.68□□□□□ -0.38
ACTN1-210ENST00000553779 IGHMBP2P38935 993 aaKnown RBP12.68□□□□□ -0.38
ACTN1-210ENST00000553779 KCNJ4P48050 445 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 DGKZQ13574 1117 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 TTLL12Q14166 644 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-210ENST00000553779 FAM161AQ3B820 660 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
ACTN1-210ENST00000553779 DLK2Q6UY11 383 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 KSR2Q6VAB6 950 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 A0A1B0GUL6 1792 aa12.68□□□□□ -0.38
ACTN1-210ENST00000553779 USP17L8P0C7I0 530 aa12.67□□□□□ -0.38
ACTN1-210ENST00000553779 SCARF1Q14162 830 aa12.67□□□□□ -0.38
ACTN1-210ENST00000553779 TWISTNBQ3B726 338 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-210ENST00000553779 UBE3BQ7Z3V4 1068 aa12.67□□□□□ -0.38
ACTN1-210ENST00000553779 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
ACTN1-210ENST00000553779 MYOZ2Q9NPC6 264 aa12.67□□□□□ -0.38
ACTN1-210ENST00000553779 FKBP5Q13451 457 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-210ENST00000553779 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
ACTN1-210ENST00000553779 MPHOSPH8Q99549 860 aa12.66□□□□□ -0.38
ACTN1-210ENST00000553779 MCOLN1Q9GZU1 580 aa12.66□□□□□ -0.38
ACTN1-210ENST00000553779 MYH16Q9H6N6 1097 aa12.66□□□□□ -0.38
ACTN1-210ENST00000553779 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-210ENST00000553779 MED23Q9ULK4 1368 aa12.66□□□□□ -0.38
ACTN1-210ENST00000553779 ASTN2O75129 1339 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-210ENST00000553779 NF2P35240 595 aa12.65□□□□□ -0.38
ACTN1-210ENST00000553779 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-210ENST00000553779 MLLT1Q03111 559 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-210ENST00000553779 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.38
ACTN1-210ENST00000553779 PODNQ7Z5L7 613 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms