RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 KLRG1Q96E93 195 aa9.49□□□□□ -0.89
ATXN3-223ENST00000553686 GPC6Q9Y625 555 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-223ENST00000553686 PLXNC1O60486 1568 aa9.49□□□□□ -0.89
ATXN3-223ENST00000553686 IQGAP1P46940 1657 aa9.48□□□□□ -0.89
ATXN3-223ENST00000553686 DCDC2BA2VCK2 349 aa9.48□□□□□ -0.89
ATXN3-223ENST00000553686 KHNYNO15037 678 aaKnown RBP9.48□□□□□ -0.89
ATXN3-223ENST00000553686 CELA2BP08218 269 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-223ENST00000553686 MAPTP10636 758 aaKnown RBP9.48□□□□□ -0.89
ATXN3-223ENST00000553686 BMP4P12644 408 aa9.48□□□□□ -0.89
ATXN3-223ENST00000553686 MAP2K3P46734 347 aa9.48□□□□□ -0.89
ATXN3-223ENST00000553686 STK32AQ8WU08 396 aa9.48□□□□□ -0.89
ATXN3-223ENST00000553686 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
ATXN3-223ENST00000553686 LRP6O75581 1613 aa9.47□□□□□ -0.89
ATXN3-223ENST00000553686 C2CD2LO14523 706 aa9.47□□□□□ -0.89
ATXN3-223ENST00000553686 SAMD5Q5TGI4 173 aa9.47□□□□□ -0.89
ATXN3-223ENST00000553686 ACDQ96AP0 544 aa9.47□□□□□ -0.89
ATXN3-223ENST00000553686 PRIMPOLQ96LW4 560 aa9.47□□□□□ -0.89
ATXN3-223ENST00000553686 ANKIB1Q9P2G1 1089 aa9.47□□□□□ -0.89
ATXN3-223ENST00000553686 ACIN1Q9UKV3 1341 aaKnown RBP9.47□□□□□ -0.89
ATXN3-223ENST00000553686 SWI5Q1ZZU3 235 aa9.46□□□□□ -0.9
ATXN3-223ENST00000553686 SLC26A8Q96RN1 970 aa9.46□□□□□ -0.9
ATXN3-223ENST00000553686 SYCP2Q9BX26 1530 aa9.46□□□□□ -0.9
ATXN3-223ENST00000553686 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 FAM157BP0CG42 384 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 MAP3K10Q02779 954 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 ZNF280CQ8ND82 737 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 VTI1AQ96AJ9 217 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 SUSD3Q96L08 255 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 C8orf37Q96NL8 207 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 HCN2Q9UL51 889 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 ADAMTS8Q9UP79 889 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 CCNB3Q8WWL7 1395 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 RGS12O14924 1447 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 EEA1Q15075 1411 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 ITSN2Q9NZM3 1697 aa9.45□□□□□ -0.9
ATXN3-223ENST00000553686 PRMT3O60678 531 aa9.44□□□□□ -0.9
ATXN3-223ENST00000553686 BCRP11274 1271 aa9.44□□□□□ -0.9
ATXN3-223ENST00000553686 ATF3P18847 181 aa9.44□□□□□ -0.9
ATXN3-223ENST00000553686 CD33P20138 364 aa9.44□□□□□ -0.9
ATXN3-223ENST00000553686 TMEM164Q5U3C3 297 aa9.44□□□□□ -0.9
ATXN3-223ENST00000553686 HSH2DQ96JZ2 352 aa9.44□□□□□ -0.9
ATXN3-223ENST00000553686 OXCT2Q9BYC2 517 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-223ENST00000553686 MARK1Q9P0L2 795 aa9.44□□□□□ -0.9
ATXN3-223ENST00000553686 GPATCH8Q9UKJ3 1502 aaKnown RBP9.44□□□□□ -0.9
ATXN3-223ENST00000553686 ROBO1Q9Y6N7 1651 aa9.44□□□□□ -0.9
ATXN3-223ENST00000553686 PREX2Q70Z35 1606 aa9.43□□□□□ -0.9
ATXN3-223ENST00000553686 SETBP1Q9Y6X0 1596 aa9.43□□□□□ -0.9
ATXN3-223ENST00000553686 FOXO3O43524 673 aa9.43□□□□□ -0.9
ATXN3-223ENST00000553686 YY1P25490 414 aa9.43□□□□□ -0.9
ATXN3-223ENST00000553686 LRRC59Q96AG4 307 aaKnown RBP9.43□□□□□ -0.9
ATXN3-223ENST00000553686 STRN4Q9NRL3 753 aa9.43□□□□□ -0.9
ATXN3-223ENST00000553686 TIMELESSQ9UNS1 1208 aa9.43□□□□□ -0.9
ATXN3-223ENST00000553686 STRCP1A6NGW2 1772 aa9.42□□□□□ -0.9
ATXN3-223ENST00000553686 CDC42BPBQ9Y5S2 1711 aa9.42□□□□□ -0.9
ATXN3-223ENST00000553686 EFSO43281 561 aa9.42□□□□□ -0.9
ATXN3-223ENST00000553686 LAMC2Q13753 1193 aa9.42□□□□□ -0.9
ATXN3-223ENST00000553686 RTN1Q16799 776 aa9.42□□□□□ -0.9
ATXN3-223ENST00000553686 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
ATXN3-223ENST00000553686 CEP63Q96MT8 703 aa9.42□□□□□ -0.9
ATXN3-223ENST00000553686 C19orf44Q9H6X5 657 aa9.42□□□□□ -0.9
ATXN3-223ENST00000553686 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.42□□□□□ -0.9
ATXN3-223ENST00000553686 ENAMQ9NRM1 1142 aa9.42□□□□□ -0.9
ATXN3-223ENST00000553686 TRPC5Q9UL62 973 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-223ENST00000553686 PRDM15P57071 1507 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-223ENST00000553686 CCDC18Q5T9S5 1454 aa9.41□□□□□ -0.9
ATXN3-223ENST00000553686 ARHGAP23Q9P227 1491 aa9.41□□□□□ -0.9
ATXN3-223ENST00000553686 TMEM2Q9UHN6 1383 aa9.41□□□□□ -0.9
ATXN3-223ENST00000553686 PPP1R15AO75807 674 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-223ENST00000553686 TSPY4P0CV99 314 aa9.41□□□□□ -0.9
ATXN3-223ENST00000553686 TSPY10P0CW01 314 aa9.41□□□□□ -0.9
ATXN3-223ENST00000553686 SFSWAPQ12872 951 aaKnown RBP9.41□□□□□ -0.9
ATXN3-223ENST00000553686 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
ATXN3-223ENST00000553686 HIF1AQ16665 826 aa9.41□□□□□ -0.9
ATXN3-223ENST00000553686 PRR12Q9ULL5 1215 aa9.41□□□□□ -0.9
ATXN3-223ENST00000553686 ABCC3O15438 1527 aa9.41□□□□□ -0.9
ATXN3-223ENST00000553686 NCOA3Q9Y6Q9 1424 aa9.4□□□□□ -0.9
ATXN3-223ENST00000553686 ZNF644Q9H582 1327 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-223ENST00000553686 OIP5O43482 229 aa9.4□□□□□ -0.9
ATXN3-223ENST00000553686 OCLNQ16625 522 aa9.4□□□□□ -0.9
ATXN3-223ENST00000553686 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
ATXN3-223ENST00000553686 GDF2Q9UK05 429 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-223ENST00000553686 DNMT3AQ9Y6K1 912 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-223ENST00000553686 INO80Q9ULG1 1556 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-223ENST00000553686 MARSP56192 900 aaKnown RBP9.39□□□□□ -0.91
ATXN3-223ENST00000553686 FKBP5Q13451 457 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-223ENST00000553686 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
ATXN3-223ENST00000553686 NEDD1Q8NHV4 660 aa9.39□□□□□ -0.91
ATXN3-223ENST00000553686 BRD7Q9NPI1 651 aa9.39□□□□□ -0.91
ATXN3-223ENST00000553686 LRRC4BQ9NT99 713 aa9.39□□□□□ -0.91
ATXN3-223ENST00000553686 KLK14Q9P0G3 267 aa9.39□□□□□ -0.91
ATXN3-223ENST00000553686 GGA1Q9UJY5 639 aa9.39□□□□□ -0.91
ATXN3-223ENST00000553686 USP21Q9UK80 565 aa9.39□□□□□ -0.91
ATXN3-223ENST00000553686 SLIT1O75093 1534 aa9.39□□□□□ -0.91
ATXN3-223ENST00000553686 NCOA2Q15596 1464 aa9.39□□□□□ -0.91
ATXN3-223ENST00000553686 MAP3K1Q13233 1512 aa9.38□□□□□ -0.91
ATXN3-223ENST00000553686 ARAFP10398 606 aa9.38□□□□□ -0.91
ATXN3-223ENST00000553686 GRIN2CQ14957 1233 aa9.38□□□□□ -0.91
ATXN3-223ENST00000553686 C1orf229Q6ZS94 237 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-223ENST00000553686 BRINP3Q76B58 766 aa9.38□□□□□ -0.91
ATXN3-223ENST00000553686 BTLAQ7Z6A9 289 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms