RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 ZGPATQ8N5A5 531 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-203ENST00000553391 UPF3BQ9BZI7 483 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-203ENST00000553391 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
MTHFD1-203ENST00000553391 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
MTHFD1-203ENST00000553391 ZNF609O15014 1411 aa11.27□□□□□ -0.6
MTHFD1-203ENST00000553391 GOLIM4O00461 696 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 CHGBP05060 677 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 GSE1Q14687 1217 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 ATP2B3Q16720 1220 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 ADCK5Q3MIX3 580 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 TTC39AQ5SRH9 613 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 VPS53Q5VIR6 699 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 DDX46Q7L014 1031 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 SEC62Q99442 399 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 CNNM1Q9NRU3 951 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 NARFQ9UHQ1 456 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 ZDHHC9Q9Y397 364 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 RTL9Q8NET4 1388 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 RREB1Q92766 1687 aa11.27□□□□□ -0.61
MTHFD1-203ENST00000553391 ZKSCAN1P17029 563 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 PSMA5P28066 241 aa11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 AK2P54819 239 aa11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 GORABQ5T7V8 394 aa11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 RUFY3Q7L099 469 aa11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 ZSCAN31Q96LW9 406 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 JAKMIP1Q96N16 626 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 HMG20BQ9P0W2 317 aa11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 TRPC5Q9UL62 973 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 CYP46A1Q9Y6A2 500 aa11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 CICQ96RK0 1608 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 AFF2P51816 1311 aa11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 MROH5Q6ZUA9 1318 aa11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-203ENST00000553391 FAM177BA6PVY3 158 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 KCNQ4P56696 695 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 SCARF1Q14162 830 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 CCDC152Q4G0S7 254 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 RNF20Q5VTR2 975 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 SEPT12Q8IYM1 358 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 LPIN2Q92539 896 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 GBP4Q96PP9 640 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 SEC31BQ9NQW1 1179 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 NUP98P52948 1817 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 ABCC12Q96J65 1359 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 ATRNO75882 1429 aa11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
MTHFD1-203ENST00000553391 ZNF831Q5JPB2 1677 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 DDX11L8A8MPP1 907 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 TRAK2O60296 914 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 ZFYP08048 801 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 UQCRFS1P1P0C7P4 283 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 CPA1P15085 419 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 PTMSP20962 102 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 ZAP70P43403 619 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 KCNJ4P48050 445 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 CCDC129Q6ZRS4 1044 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 QTRT2Q9H974 415 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 RIC1Q4ADV7 1423 aa11.24□□□□□ -0.61
MTHFD1-203ENST00000553391 BRD1O95696 1058 aa11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 RPS6KB1P23443 525 aa11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 ARID4AP29374 1257 aaPredicted RBP11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 KRT32Q14532 448 aa11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 ERFEQ4G0M1 354 aa11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 FAM182BQ5T319 152 aa11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 TBC1D9BQ66K14 1250 aa11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 OSBP2Q969R2 916 aa11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 TAF6LQ9Y6J9 622 aa11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 RPAP1Q9BWH6 1393 aaPredicted RBP11.23□□□□□ -0.61
MTHFD1-203ENST00000553391 CYP21A2P08686 494 aa11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 HSPD1P10809 573 aaKnown RBP11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 IGHMBP2P38935 993 aaKnown RBP11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 MCAMP43121 646 aa11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 PKP1Q13835 747 aa11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 PUM3Q15397 648 aaKnown RBP11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 SKOR2Q2VWA4 1001 aaPredicted RBP11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 AK9Q5TCS8 1911 aa11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 CCDC102BQ68D86 513 aa11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 SMIM5Q71RC9 77 aa11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 HELBQ8NG08 1087 aaPredicted RBP11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 ARHGEF1Q92888 912 aaKnown RBP11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 MPHOSPH8Q99549 860 aa11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 SH2B1Q9NRF2 756 aaPredicted RBP11.22□□□□□ -0.61
MTHFD1-203ENST00000553391 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 M0R2C6 588 aa11.21□□□□□ -0.61
MTHFD1-203ENST00000553391 SLC5A1P13866 664 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms