RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 BTAF1O14981 1849 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 RREB1Q92766 1687 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 ATP2B3Q16720 1220 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 GZF1Q9H116 711 aaPredicted RBP10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 CICQ96RK0 1608 aaPredicted RBP10.9□□□□□ -0.66
RAB3IP-218ENST00000553099 RNF20Q5VTR2 975 aa10.9□□□□□ -0.66
RAB3IP-218ENST00000553099 SMIM5Q71RC9 77 aa10.9□□□□□ -0.66
RAB3IP-218ENST00000553099 CYP46A1Q9Y6A2 500 aa10.9□□□□□ -0.66
RAB3IP-218ENST00000553099 SLC27A2O14975 620 aa10.9□□□□□ -0.67
RAB3IP-218ENST00000553099 MCMDC2Q4G0Z9 681 aa10.9□□□□□ -0.67
RAB3IP-218ENST00000553099 CERKQ8TCT0 537 aa10.9□□□□□ -0.67
RAB3IP-218ENST00000553099 RIPOR2Q9Y4F9 1068 aa10.9□□□□□ -0.67
RAB3IP-218ENST00000553099 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 TAF5LO75529 589 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 BICDL1Q6ZP65 573 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 HELBQ8NG08 1087 aaPredicted RBP10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 TTC14Q96N46 770 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 PDRG1Q9NUG6 133 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 DDX60Q8IY21 1712 aaKnown RBP10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 BCORQ6W2J9 1755 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 GOLGA6L22H0YM25 854 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 TRAK2O60296 914 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 HSPA1LP34931 641 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 PARP10Q53GL7 1025 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 PI16Q6UXB8 463 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 POTEDQ86YR6 584 aa10.89□□□□□ -0.67
RAB3IP-218ENST00000553099 AFF2P51816 1311 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 MYH7P12883 1935 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 CUL4AQ13619 759 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 SCARF1Q14162 830 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 RUFY3Q7L099 469 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 TCEANC2Q96MN5 208 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 MPHOSPH8Q99549 860 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 SEC31BQ9NQW1 1179 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 TAF6LQ9Y6J9 622 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 THSD7AQ9UPZ6 1657 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
RAB3IP-218ENST00000553099 EP400Q96L91 3159 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 BAG4O95429 457 aaKnown RBP10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 NTSR2O95665 410 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 PSMA5P28066 241 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 ZAP70P43403 619 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 MCTP1Q6DN14 999 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 INTS4Q96HW7 963 aaKnown RBP10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 GJD4Q96KN9 370 aaPredicted RBP10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 MYO5AQ9Y4I1 1855 aaKnown RBP10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 PDE8BO95263 885 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 COL9A3Q14050 684 aaPredicted RBP10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 WASHC4Q2M389 1173 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 CCDC152Q4G0S7 254 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 VPS53Q5VIR6 699 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 BLOC1S2Q6QNY1 142 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 KCNB2Q92953 911 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 TM6SF1Q9BZW5 370 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 CCNL1Q9UK58 526 aaPredicted RBP10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 NHSQ6T4R5 1651 aa10.87□□□□□ -0.67
RAB3IP-218ENST00000553099 TAF1P21675 1872 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 AKAP11Q9UKA4 1901 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 ZNF831Q5JPB2 1677 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 GNPATO15228 680 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 DTNBO60941 627 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 LARGE1O95461 756 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 CYP2E1P05181 493 aaPredicted RBP10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 GTF2E1P29083 439 aaPredicted RBP10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 VGLL2Q8N8G2 317 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 HMG20BQ9P0W2 317 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 LAMB2P55268 1798 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 RPAP1Q9BWH6 1393 aaPredicted RBP10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 SNAP23O00161 211 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 RNF113AO15541 343 aaKnown RBP10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 MCAMP43121 646 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 AK7Q96M32 723 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 HELLSQ9NRZ9 838 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 ZDHHC9Q9Y397 364 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 CASZ1Q86V15 1759 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 MAST3O60307 1309 aa10.86□□□□□ -0.67
RAB3IP-218ENST00000553099 IGHMBP2P38935 993 aaKnown RBP10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 ZMYM1Q5SVZ6 1142 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 CCDC83Q8IWF9 413 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 IL27Q8NEV9 243 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 SBF2Q86WG5 1849 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 CNTNAP4Q9C0A0 1308 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 CYP21A2P08686 494 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 PUM3Q15397 648 aaKnown RBP10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 LRRFIP1Q32MZ4 808 aaKnown RBP10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 USPL1Q5W0Q7 1092 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 MROH5Q6ZUA9 1318 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 LRP5O75197 1615 aa10.85□□□□□ -0.67
RAB3IP-218ENST00000553099 M0R2C6 588 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 HSP90B1P14625 803 aaKnown RBP10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 PHKA1P46020 1223 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 FOXD4L6Q3SYB3 417 aaPredicted RBP10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 ERFEQ4G0M1 354 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 CLEC4GQ6UXB4 293 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 FOXD4L3Q6VB84 417 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms