RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 ANKRD36CQ5JPF3 1778 aa14.8□□□□□ -0.04
NEK3-204ENST00000552973 PDE8AO60658 829 aa14.79□□□□□ -0.04
NEK3-204ENST00000552973 UFL1O94874 794 aa14.79□□□□□ -0.04
NEK3-204ENST00000552973 DDX58O95786 925 aaKnown RBP14.79□□□□□ -0.04
NEK3-204ENST00000552973 EGFRP00533 1210 aa14.79□□□□□ -0.04
NEK3-204ENST00000552973 LAMB2P55268 1798 aa14.79□□□□□ -0.04
NEK3-204ENST00000552973 CCDC152Q4G0S7 254 aa14.79□□□□□ -0.04
NEK3-204ENST00000552973 ZC3H15Q8WU90 426 aaKnown RBP14.79□□□□□ -0.04
NEK3-204ENST00000552973 CDHR2Q9BYE9 1310 aa14.79□□□□□ -0.04
NEK3-204ENST00000552973 ANKIB1Q9P2G1 1089 aa14.79□□□□□ -0.04
NEK3-204ENST00000552973 PCNTO95613 3336 aa14.79□□□□□ -0.04
NEK3-204ENST00000552973 RTL9Q8NET4 1388 aa14.78□□□□□ -0.04
NEK3-204ENST00000552973 PI4KAP2A4QPH2 592 aa14.78□□□□□ -0.04
NEK3-204ENST00000552973 G3V3G9 751 aa14.78□□□□□ -0.04
NEK3-204ENST00000552973 HSP90B1P14625 803 aaKnown RBP14.78□□□□□ -0.04
NEK3-204ENST00000552973 DCAF8Q5TAQ9 597 aa14.78□□□□□ -0.04
NEK3-204ENST00000552973 SAPCD2Q86UD0 394 aa14.78□□□□□ -0.04
NEK3-204ENST00000552973 PI4KAP1Q8N8J0 262 aa14.78□□□□□ -0.04
NEK3-204ENST00000552973 DPF2Q92785 391 aa14.78□□□□□ -0.04
NEK3-204ENST00000552973 TSKSQ9UJT2 592 aa14.78□□□□□ -0.04
NEK3-204ENST00000552973 TAF1P21675 1872 aa14.78□□□□□ -0.04
NEK3-204ENST00000552973 KSR2Q6VAB6 950 aa14.77□□□□□ -0.05
NEK3-204ENST00000552973 BEGAINQ9BUH8 593 aa14.77□□□□□ -0.05
NEK3-204ENST00000552973 GGA1Q9UJY5 639 aa14.77□□□□□ -0.05
NEK3-204ENST00000552973 SALL2Q9Y467 1007 aaPredicted RBP14.77□□□□□ -0.05
NEK3-204ENST00000552973 DDX60Q8IY21 1712 aaKnown RBP14.77□□□□□ -0.05
NEK3-204ENST00000552973 IGKV5-2P06315 115 aa14.76□□□□□ -0.05
NEK3-204ENST00000552973 CWF19L2Q2TBE0 894 aaKnown RBP14.76□□□□□ -0.05
NEK3-204ENST00000552973 G2E3Q7L622 706 aa14.76□□□□□ -0.05
NEK3-204ENST00000552973 ANKRD18AQ8IVF6 992 aa14.76□□□□□ -0.05
NEK3-204ENST00000552973 WWC1Q8IX03 1113 aa14.76□□□□□ -0.05
NEK3-204ENST00000552973 STK31Q9BXU1 1019 aa14.76□□□□□ -0.05
NEK3-204ENST00000552973 PODXL2Q9NZ53 605 aa14.76□□□□□ -0.05
NEK3-204ENST00000552973 WTIPA6NIX2 430 aaPredicted RBP14.75□□□□□ -0.05
NEK3-204ENST00000552973 ADM5C9JUS6 153 aa14.75□□□□□ -0.05
NEK3-204ENST00000552973 TWISTNBQ3B726 338 aaPredicted RBP14.75□□□□□ -0.05
NEK3-204ENST00000552973 KRT26Q7Z3Y9 468 aa14.75□□□□□ -0.05
NEK3-204ENST00000552973 CHMP4AQ9BY43 222 aa14.75□□□□□ -0.05
NEK3-204ENST00000552973 ASTN2O75129 1339 aaPredicted RBP14.74□□□□□ -0.05
NEK3-204ENST00000552973 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
NEK3-204ENST00000552973 VIL1P09327 827 aaKnown RBP14.74□□□□□ -0.05
NEK3-204ENST00000552973 RPS12P25398 132 aaKnown RBP14.74□□□□□ -0.05
NEK3-204ENST00000552973 MAP2K2P36507 400 aa14.74□□□□□ -0.05
NEK3-204ENST00000552973 DCPSQ96C86 337 aaKnown RBP14.74□□□□□ -0.05
NEK3-204ENST00000552973 GREM2Q9H772 168 aa14.74□□□□□ -0.05
NEK3-204ENST00000552973 CTSWP56202 376 aa14.73□□□□□ -0.05
NEK3-204ENST00000552973 HUNKP57058 714 aa14.73□□□□□ -0.05
NEK3-204ENST00000552973 NEXNQ0ZGT2 675 aa14.73□□□□□ -0.05
NEK3-204ENST00000552973 CCDC27Q2M243 656 aa14.73□□□□□ -0.05
NEK3-204ENST00000552973 KIF4BQ2VIQ3 1234 aa14.73□□□□□ -0.05
NEK3-204ENST00000552973 TTLL11Q8NHH1 800 aa14.73□□□□□ -0.05
NEK3-204ENST00000552973 ZIC5Q96T25 663 aa14.73□□□□□ -0.05
NEK3-204ENST00000552973 MRS2Q9HD23 443 aa14.73□□□□□ -0.05
NEK3-204ENST00000552973 LRRC37AA6NMS7 1700 aa14.72□□□□□ -0.05
NEK3-204ENST00000552973 XDHP47989 1333 aa14.72□□□□□ -0.05
NEK3-204ENST00000552973 NEURL1BA8MQ27 555 aa14.72□□□□□ -0.05
NEK3-204ENST00000552973 ATP2B4P23634 1241 aa14.72□□□□□ -0.05
NEK3-204ENST00000552973 RSBN1LQ6PCB5 846 aaPredicted RBP14.71□□□□□ -0.05
NEK3-204ENST00000552973 UBE3BQ7Z3V4 1068 aa14.71□□□□□ -0.05
NEK3-204ENST00000552973 HHIPL1Q96JK4 782 aa14.71□□□□□ -0.05
NEK3-204ENST00000552973 CDC5LQ99459 802 aaKnown RBP14.71□□□□□ -0.05
NEK3-204ENST00000552973 GBA2Q9HCG7 927 aaPredicted RBP14.71□□□□□ -0.05
NEK3-204ENST00000552973 GGA3Q9NZ52 723 aa14.71□□□□□ -0.05
NEK3-204ENST00000552973 MINPP1Q9UNW1 487 aa14.71□□□□□ -0.05
NEK3-204ENST00000552973 H7C1W4 665 aa14.7□□□□□ -0.06
NEK3-204ENST00000552973 SCARF1Q14162 830 aa14.7□□□□□ -0.06
NEK3-204ENST00000552973 SULF1Q8IWU6 871 aa14.7□□□□□ -0.06
NEK3-204ENST00000552973 C2orf69Q8N8R5 385 aa14.7□□□□□ -0.06
NEK3-204ENST00000552973 ABHD8Q96I13 439 aa14.7□□□□□ -0.06
NEK3-204ENST00000552973 MXD3Q9BW11 206 aa14.7□□□□□ -0.06
NEK3-204ENST00000552973 SCAF8Q9UPN6 1271 aaKnown RBP14.7□□□□□ -0.06
NEK3-204ENST00000552973 FLIIQ13045 1269 aa14.69□□□□□ -0.06
NEK3-204ENST00000552973 FKBP5Q13451 457 aaPredicted RBP14.69□□□□□ -0.06
NEK3-204ENST00000552973 ANGEL2Q5VTE6 544 aaKnown RBP14.69□□□□□ -0.06
NEK3-204ENST00000552973 RGMBQ6NW40 437 aa14.69□□□□□ -0.06
NEK3-204ENST00000552973 AGBL3Q8NEM8 1001 aa14.69□□□□□ -0.06
NEK3-204ENST00000552973 FBXW7Q969H0 707 aa14.69□□□□□ -0.06
NEK3-204ENST00000552973 BSDC1Q9NW68 430 aaPredicted RBP14.69□□□□□ -0.06
NEK3-204ENST00000552973 USP17L3A6NCW0 530 aa14.68□□□□□ -0.06
NEK3-204ENST00000552973 USP17L4A6NCW7 530 aa14.68□□□□□ -0.06
NEK3-204ENST00000552973 ANP32CO43423 234 aa14.68□□□□□ -0.06
NEK3-204ENST00000552973 USP17L8P0C7I0 530 aa14.68□□□□□ -0.06
NEK3-204ENST00000552973 CCT4P50991 539 aaKnown RBP14.68□□□□□ -0.06
NEK3-204ENST00000552973 BRPF1P55201 1214 aaPredicted RBP14.68□□□□□ -0.06
NEK3-204ENST00000552973 ZNF280AP59817 542 aaPredicted RBP14.68□□□□□ -0.06
NEK3-204ENST00000552973 GCKRQ14397 625 aa14.68□□□□□ -0.06
NEK3-204ENST00000552973 USP17L1Q7RTZ2 530 aa14.68□□□□□ -0.06
NEK3-204ENST00000552973 PODNQ7Z5L7 613 aa14.68□□□□□ -0.06
NEK3-204ENST00000552973 IL16Q14005 1332 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 FANCIQ9NVI1 1328 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 VAMP4O75379 141 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 ITGA6P23229 1130 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 IGHMBP2P38935 993 aaKnown RBP14.67□□□□□ -0.06
NEK3-204ENST00000552973 ZNF157P51786 506 aaPredicted RBP14.67□□□□□ -0.06
NEK3-204ENST00000552973 EXOSC9Q06265 439 aaKnown RBP14.67□□□□□ -0.06
NEK3-204ENST00000552973 NOGQ13253 232 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 FAM161AQ3B820 660 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 TXNRD3Q86VQ6 643 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 DNAAF4Q8WXU2 420 aa14.67□□□□□ -0.06
NEK3-204ENST00000552973 CDCA5Q96FF9 252 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms