RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 FKBP1BP68106 108 aa15.06■□□□□ 0
SUPT16H-202ENST00000552829 KIF4BQ2VIQ3 1234 aa15.06■□□□□ 0
SUPT16H-202ENST00000552829 FBXO46Q6PJ61 603 aaPredicted RBP15.06■□□□□ 0
SUPT16H-202ENST00000552829 SULF1Q8IWU6 871 aa15.06■□□□□ 0
SUPT16H-202ENST00000552829 GGA3Q9NZ52 723 aa15.06■□□□□ 0
SUPT16H-202ENST00000552829 POLLQ9UGP5 575 aa15.06■□□□□ 0
SUPT16H-202ENST00000552829 TBC1D8O95759 1140 aa15.05■□□□□ -0
SUPT16H-202ENST00000552829 CNGB1Q14028 1251 aaPredicted RBP15.05■□□□□ -0
SUPT16H-202ENST00000552829 PROSER3Q2NL68 480 aa15.05■□□□□ -0
SUPT16H-202ENST00000552829 HDAC9Q9UKV0 1011 aa15.05■□□□□ -0
SUPT16H-202ENST00000552829 ZNF609O15014 1411 aa15.05■□□□□ -0
SUPT16H-202ENST00000552829 PSME4Q14997 1843 aa15.05■□□□□ -0
SUPT16H-202ENST00000552829 COL4A1P02462 1669 aa15.04■□□□□ -0
SUPT16H-202ENST00000552829 SH3TC1Q8TE82 1336 aa15.04■□□□□ -0
SUPT16H-202ENST00000552829 GPR25O00155 361 aa15.04■□□□□ -0
SUPT16H-202ENST00000552829 ECE2O60344 883 aa15.04■□□□□ -0
SUPT16H-202ENST00000552829 TM4SF4P48230 202 aa15.04■□□□□ -0
SUPT16H-202ENST00000552829 ZNF280AP59817 542 aaPredicted RBP15.04■□□□□ -0
SUPT16H-202ENST00000552829 RIMBP2O15034 1052 aa15.03■□□□□ -0
SUPT16H-202ENST00000552829 TCIRG1Q13488 830 aa15.03■□□□□ -0
SUPT16H-202ENST00000552829 HSP90AB3PQ58FF7 597 aa15.03■□□□□ -0
SUPT16H-202ENST00000552829 CFHR5Q9BXR6 569 aa15.03■□□□□ -0
SUPT16H-202ENST00000552829 TRMT112Q9UI30 125 aaKnown RBP15.03■□□□□ -0
SUPT16H-202ENST00000552829 NSFL1CQ9UNZ2 370 aaKnown RBP15.03■□□□□ -0
SUPT16H-202ENST00000552829 ANXA1P04083 346 aa15.02■□□□□ -0
SUPT16H-202ENST00000552829 PPP2R1AP30153 589 aa15.02■□□□□ -0
SUPT16H-202ENST00000552829 GPSM2P81274 684 aa15.02■□□□□ -0
SUPT16H-202ENST00000552829 SCARF1Q14162 830 aa15.02■□□□□ -0
SUPT16H-202ENST00000552829 SF3B3Q15393 1217 aaKnown RBP15.02■□□□□ -0
SUPT16H-202ENST00000552829 DOK7Q18PE1 504 aa15.02■□□□□ -0
SUPT16H-202ENST00000552829 SAMD1Q6SPF0 538 aaPredicted RBP15.02■□□□□ -0
SUPT16H-202ENST00000552829 CELF1Q92879 486 aaKnown RBP15.02■□□□□ -0
SUPT16H-202ENST00000552829 GMLQ99445 158 aa15.02■□□□□ -0
SUPT16H-202ENST00000552829 RBBP6Q7Z6E9 1792 aaKnown RBP15.01□□□□□ -0.01
SUPT16H-202ENST00000552829 PITPNM2Q9BZ72 1349 aa15.01□□□□□ -0.01
SUPT16H-202ENST00000552829 C6orf229H3BNL8 230 aa15.01□□□□□ -0.01
SUPT16H-202ENST00000552829 ANGEL2Q5VTE6 544 aaKnown RBP15.01□□□□□ -0.01
SUPT16H-202ENST00000552829 MOB2Q70IA6 237 aa15.01□□□□□ -0.01
SUPT16H-202ENST00000552829 PLEKHF1Q96S99 279 aa15.01□□□□□ -0.01
SUPT16H-202ENST00000552829 UBE2Q2LH0YL09 131 aa15□□□□□ -0.01
SUPT16H-202ENST00000552829 FXR1P51114 621 aaKnown RBP eCLIP15□□□□□ -0.01
SUPT16H-202ENST00000552829 COPS6Q7L5N1 327 aa15□□□□□ -0.01
SUPT16H-202ENST00000552829 AGBL3Q8NEM8 1001 aa15□□□□□ -0.01
SUPT16H-202ENST00000552829 TBC1D16Q8TBP0 767 aa15□□□□□ -0.01
SUPT16H-202ENST00000552829 NECTIN2Q92692 538 aa15□□□□□ -0.01
SUPT16H-202ENST00000552829 EYA3Q99504 573 aa15□□□□□ -0.01
SUPT16H-202ENST00000552829 R3HDMLQ9H3Y0 253 aa15□□□□□ -0.01
SUPT16H-202ENST00000552829 CEP290O15078 2479 aa15□□□□□ -0.01
SUPT16H-202ENST00000552829 FKTNO75072 461 aa14.99□□□□□ -0.01
SUPT16H-202ENST00000552829 NFE2L2Q16236 605 aa14.99□□□□□ -0.01
SUPT16H-202ENST00000552829 XAGE3Q8WTP9 111 aa14.99□□□□□ -0.01
SUPT16H-202ENST00000552829 RNF39Q9H2S5 420 aa14.99□□□□□ -0.01
SUPT16H-202ENST00000552829 PODXL2Q9NZ53 605 aa14.99□□□□□ -0.01
SUPT16H-202ENST00000552829 POTEFA5A3E0 1075 aa14.98□□□□□ -0.01
SUPT16H-202ENST00000552829 EIF2S2P20042 333 aaKnown RBP14.98□□□□□ -0.01
SUPT16H-202ENST00000552829 RSBN1LQ6PCB5 846 aaPredicted RBP14.98□□□□□ -0.01
SUPT16H-202ENST00000552829 CENPFP49454 3210 aa14.98□□□□□ -0.01
SUPT16H-202ENST00000552829 TRIOBPQ9H2D6 2365 aa14.97□□□□□ -0.01
SUPT16H-202ENST00000552829 RPS8P62241 208 aaKnown RBP14.96□□□□□ -0.01
SUPT16H-202ENST00000552829 INTS3Q68E01 1043 aaKnown RBP14.96□□□□□ -0.01
SUPT16H-202ENST00000552829 ISCA1Q9BUE6 129 aa14.96□□□□□ -0.01
SUPT16H-202ENST00000552829 ZC3H12CQ9C0D7 883 aaKnown RBP14.96□□□□□ -0.01
SUPT16H-202ENST00000552829 MYOZ2Q9NPC6 264 aa14.96□□□□□ -0.01
SUPT16H-202ENST00000552829 AIMP1Q12904 312 aaKnown RBP14.95□□□□□ -0.02
SUPT16H-202ENST00000552829 FAM89AQ96GI7 184 aa14.95□□□□□ -0.02
SUPT16H-202ENST00000552829 BABAM1Q9NWV8 329 aa14.95□□□□□ -0.02
SUPT16H-202ENST00000552829 TSPYL4Q9UJ04 414 aa14.95□□□□□ -0.02
SUPT16H-202ENST00000552829 SCAF8Q9UPN6 1271 aaKnown RBP14.95□□□□□ -0.02
SUPT16H-202ENST00000552829 ZNF646O15015 1829 aaPredicted RBP14.94□□□□□ -0.02
SUPT16H-202ENST00000552829 LAMB1P07942 1786 aa14.94□□□□□ -0.02
SUPT16H-202ENST00000552829 USP17L8P0C7I0 530 aa14.94□□□□□ -0.02
SUPT16H-202ENST00000552829 SREBF2Q12772 1141 aa14.94□□□□□ -0.02
SUPT16H-202ENST00000552829 PRAMEF18Q5VWM3 479 aa14.94□□□□□ -0.02
SUPT16H-202ENST00000552829 NEFMP07197 916 aa14.93□□□□□ -0.02
SUPT16H-202ENST00000552829 PTPN12Q05209 780 aaKnown RBP14.93□□□□□ -0.02
SUPT16H-202ENST00000552829 LDLRAD1Q5T700 205 aa14.93□□□□□ -0.02
SUPT16H-202ENST00000552829 OTOP1Q7RTM1 612 aa14.93□□□□□ -0.02
SUPT16H-202ENST00000552829 ZNF428Q96B54 188 aa14.93□□□□□ -0.02
SUPT16H-202ENST00000552829 BRCA2P51587 3418 aa14.92□□□□□ -0.02
SUPT16H-202ENST00000552829 UFL1O94874 794 aa14.92□□□□□ -0.02
SUPT16H-202ENST00000552829 TRIM28Q13263 835 aaKnown RBP14.92□□□□□ -0.02
SUPT16H-202ENST00000552829 NBPF9Q3BBW0 867 aa14.92□□□□□ -0.02
SUPT16H-202ENST00000552829 PLBD2Q8NHP8 589 aa14.92□□□□□ -0.02
SUPT16H-202ENST00000552829 MKRN3Q13064 507 aaKnown RBP14.91□□□□□ -0.02
SUPT16H-202ENST00000552829 SPRYD7Q5W111 196 aa14.91□□□□□ -0.02
SUPT16H-202ENST00000552829 ARMC5Q96C12 935 aa14.91□□□□□ -0.02
SUPT16H-202ENST00000552829 GGA1Q9UJY5 639 aa14.91□□□□□ -0.02
SUPT16H-202ENST00000552829 TRIM17Q9Y577 477 aa14.91□□□□□ -0.02
SUPT16H-202ENST00000552829 SZT2Q5T011 3432 aa14.9□□□□□ -0.02
SUPT16H-202ENST00000552829 USP17L3A6NCW0 530 aa14.9□□□□□ -0.02
SUPT16H-202ENST00000552829 USP17L4A6NCW7 530 aa14.9□□□□□ -0.02
SUPT16H-202ENST00000552829 IRS4O14654 1257 aaPredicted RBP14.9□□□□□ -0.02
SUPT16H-202ENST00000552829 ALDH1A1P00352 501 aa14.9□□□□□ -0.02
SUPT16H-202ENST00000552829 USP17L1Q7RTZ2 530 aa14.9□□□□□ -0.02
SUPT16H-202ENST00000552829 PODNQ7Z5L7 613 aa14.9□□□□□ -0.02
SUPT16H-202ENST00000552829 SEC31BQ9NQW1 1179 aa14.9□□□□□ -0.02
SUPT16H-202ENST00000552829 ATP5J2-PTCD1G3V325 749 aa14.89□□□□□ -0.03
SUPT16H-202ENST00000552829 G3V3G9 751 aa14.89□□□□□ -0.03
SUPT16H-202ENST00000552829 WNT10BO00744 389 aa14.89□□□□□ -0.03
SUPT16H-202ENST00000552829 EN2P19622 333 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms