RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 RPS6KA4O75676 772 aa12.02□□□□□ -0.49
TMEM116-216ENST00000552800 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.49
TMEM116-216ENST00000552800 MICALL2Q8IY33 904 aa12.02□□□□□ -0.49
TMEM116-216ENST00000552800 SNX21Q969T3 373 aa12.02□□□□□ -0.49
TMEM116-216ENST00000552800 ACSBG1Q96GR2 724 aa12.02□□□□□ -0.49
TMEM116-216ENST00000552800 KIF2CQ99661 725 aa12.02□□□□□ -0.49
TMEM116-216ENST00000552800 MYH3P11055 1940 aa12.01□□□□□ -0.49
TMEM116-216ENST00000552800 EYA2O00167 538 aa12.01□□□□□ -0.49
TMEM116-216ENST00000552800 ATP5JP18859 108 aa12.01□□□□□ -0.49
TMEM116-216ENST00000552800 CHMLP26374 656 aa12.01□□□□□ -0.49
TMEM116-216ENST00000552800 CASC1Q6TDU7 716 aa12.01□□□□□ -0.49
TMEM116-216ENST00000552800 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
TMEM116-216ENST00000552800 TTLL11Q8NHH1 800 aa12.01□□□□□ -0.49
TMEM116-216ENST00000552800 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.01□□□□□ -0.49
TMEM116-216ENST00000552800 PA2G4Q9UQ80 394 aaKnown RBP12.01□□□□□ -0.49
TMEM116-216ENST00000552800 TAF1LQ8IZX4 1826 aa12.01□□□□□ -0.49
TMEM116-216ENST00000552800 BCORQ6W2J9 1755 aa12□□□□□ -0.49
TMEM116-216ENST00000552800 PDE8AO60658 829 aa12□□□□□ -0.49
TMEM116-216ENST00000552800 REC8O95072 547 aa12□□□□□ -0.49
TMEM116-216ENST00000552800 MEX3CQ5U5Q3 659 aaKnown RBP12□□□□□ -0.49
TMEM116-216ENST00000552800 ZNF772Q68DY9 489 aaPredicted RBP12□□□□□ -0.49
TMEM116-216ENST00000552800 FAM196AQ6ZSG2 479 aa12□□□□□ -0.49
TMEM116-216ENST00000552800 GPATCH3Q96I76 525 aa12□□□□□ -0.49
TMEM116-216ENST00000552800 IL1RAPL2Q9NP60 686 aa12□□□□□ -0.49
TMEM116-216ENST00000552800 TNNI3KQ59H18 835 aa11.99□□□□□ -0.49
TMEM116-216ENST00000552800 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
TMEM116-216ENST00000552800 EVI5LQ96CN4 794 aa11.99□□□□□ -0.49
TMEM116-216ENST00000552800 ZNF512BQ96KM6 892 aaPredicted RBP11.99□□□□□ -0.49
TMEM116-216ENST00000552800 NARFQ9UHQ1 456 aa11.99□□□□□ -0.49
TMEM116-216ENST00000552800 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
TMEM116-216ENST00000552800 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.99□□□□□ -0.49
TMEM116-216ENST00000552800 FPGT-TNNI3KV9GXZ4 949 aa11.99□□□□□ -0.49
TMEM116-216ENST00000552800 UBN2Q6ZU65 1347 aa11.99□□□□□ -0.49
TMEM116-216ENST00000552800 RFX7Q2KHR2 1363 aa11.99□□□□□ -0.49
TMEM116-216ENST00000552800 FAM205CA6NFA0 338 aa11.98□□□□□ -0.49
TMEM116-216ENST00000552800 HIP1O00291 1037 aa11.98□□□□□ -0.49
TMEM116-216ENST00000552800 IFIT2P09913 472 aaKnown RBP11.98□□□□□ -0.49
TMEM116-216ENST00000552800 ANAPC15P60006 121 aa11.98□□□□□ -0.49
TMEM116-216ENST00000552800 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
TMEM116-216ENST00000552800 SLC27A3Q5K4L6 730 aa11.98□□□□□ -0.49
TMEM116-216ENST00000552800 NPM2Q86SE8 214 aaKnown RBP11.98□□□□□ -0.49
TMEM116-216ENST00000552800 CNTROBQ8N137 903 aa11.98□□□□□ -0.49
TMEM116-216ENST00000552800 ESYT1Q9BSJ8 1104 aa11.98□□□□□ -0.49
TMEM116-216ENST00000552800 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
TMEM116-216ENST00000552800 ZNF652Q9Y2D9 606 aa11.98□□□□□ -0.49
TMEM116-216ENST00000552800 SH3TC1Q8TE82 1336 aa11.97□□□□□ -0.49
TMEM116-216ENST00000552800 APBB1O00213 710 aa11.97□□□□□ -0.49
TMEM116-216ENST00000552800 OS9Q13438 667 aaPredicted RBP11.97□□□□□ -0.49
TMEM116-216ENST00000552800 SF3B3Q15393 1217 aaKnown RBP11.97□□□□□ -0.49
TMEM116-216ENST00000552800 CCDC57Q2TAC2 916 aa11.97□□□□□ -0.49
TMEM116-216ENST00000552800 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
TMEM116-216ENST00000552800 KCNB2Q92953 911 aa11.97□□□□□ -0.49
TMEM116-216ENST00000552800 FAM89AQ96GI7 184 aa11.97□□□□□ -0.49
TMEM116-216ENST00000552800 LAMB2P55268 1798 aa11.97□□□□□ -0.49
TMEM116-216ENST00000552800 AK9Q5TCS8 1911 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 ABCC12Q96J65 1359 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 IRS4O14654 1257 aaPredicted RBP11.96□□□□□ -0.49
TMEM116-216ENST00000552800 PLSCR1O15162 318 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 SGSM2O43147 1006 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 NTSR2O95665 410 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 CTSWP56202 376 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
TMEM116-216ENST00000552800 BECN1Q14457 450 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 SUSD4Q5VX71 490 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 PTF1AQ7RTS3 328 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 AACSQ86V21 672 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 UTP14AQ9BVJ6 771 aaKnown RBP11.96□□□□□ -0.49
TMEM116-216ENST00000552800 AKAP2Q9Y2D5 859 aa11.96□□□□□ -0.49
TMEM116-216ENST00000552800 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
TMEM116-216ENST00000552800 MFAP1P55081 439 aaKnown RBP11.95□□□□□ -0.5
TMEM116-216ENST00000552800 TFCP2Q12800 502 aa11.95□□□□□ -0.5
TMEM116-216ENST00000552800 KRT27Q7Z3Y8 459 aa11.95□□□□□ -0.5
TMEM116-216ENST00000552800 VGLL2Q8N8G2 317 aa11.95□□□□□ -0.5
TMEM116-216ENST00000552800 HAUS7Q99871 368 aa11.95□□□□□ -0.5
TMEM116-216ENST00000552800 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
TMEM116-216ENST00000552800 TRMT112Q9UI30 125 aaKnown RBP11.95□□□□□ -0.5
TMEM116-216ENST00000552800 DBNLQ9UJU6 430 aaKnown RBP11.95□□□□□ -0.5
TMEM116-216ENST00000552800 SCN7AQ01118 1682 aa11.94□□□□□ -0.5
TMEM116-216ENST00000552800 LRP5O75197 1615 aa11.94□□□□□ -0.5
TMEM116-216ENST00000552800 KLHDC4Q8TBB5 520 aa11.94□□□□□ -0.5
TMEM116-216ENST00000552800 JARID2Q92833 1246 aaPredicted RBP11.94□□□□□ -0.5
TMEM116-216ENST00000552800 CEP126Q9P2H0 1117 aa11.94□□□□□ -0.5
TMEM116-216ENST00000552800 BRWD3Q6RI45 1802 aa11.94□□□□□ -0.5
TMEM116-216ENST00000552800 COL24A1Q17RW2 1714 aa11.94□□□□□ -0.5
TMEM116-216ENST00000552800 DDX60Q8IY21 1712 aaKnown RBP11.94□□□□□ -0.5
TMEM116-216ENST00000552800 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
TMEM116-216ENST00000552800 RAD50Q92878 1312 aa11.93□□□□□ -0.5
TMEM116-216ENST00000552800 ANKRD18BA2A2Z9 1011 aa11.93□□□□□ -0.5
TMEM116-216ENST00000552800 RABEP1Q15276 862 aa11.93□□□□□ -0.5
TMEM116-216ENST00000552800 RUFY2Q8WXA3 655 aa11.93□□□□□ -0.5
TMEM116-216ENST00000552800 TBC1D2Q9BYX2 928 aa11.93□□□□□ -0.5
TMEM116-216ENST00000552800 RTCBQ9Y3I0 505 aaKnown RBP11.93□□□□□ -0.5
TMEM116-216ENST00000552800 C4BP0C0L5 1744 aa11.93□□□□□ -0.5
TMEM116-216ENST00000552800 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
TMEM116-216ENST00000552800 FGFR2P21802 821 aa11.92□□□□□ -0.5
TMEM116-216ENST00000552800 ITGA6P23229 1130 aa11.92□□□□□ -0.5
TMEM116-216ENST00000552800 TSGA10IPQ3SY00 556 aa11.92□□□□□ -0.5
TMEM116-216ENST00000552800 LRRC24Q50LG9 513 aa11.92□□□□□ -0.5
TMEM116-216ENST00000552800 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
TMEM116-216ENST00000552800 NYXQ9GZU5 481 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms