RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 GBA2Q9HCG7 927 aaPredicted RBP28.23■■■□□ 2.11
SMARCD1-212ENST00000551966 IRS4O14654 1257 aaPredicted RBP28.22■■■□□ 2.11
SMARCD1-212ENST00000551966 HOXB7P09629 217 aa28.22■■■□□ 2.11
SMARCD1-212ENST00000551966 DCPSQ96C86 337 aaKnown RBP28.22■■■□□ 2.11
SMARCD1-212ENST00000551966 C2orf69Q8N8R5 385 aa28.21■■■□□ 2.11
SMARCD1-212ENST00000551966 RUNDC1Q96C34 613 aa28.21■■■□□ 2.11
SMARCD1-212ENST00000551966 CFAP44Q96MT7 982 aa28.21■■■□□ 2.11
SMARCD1-212ENST00000551966 EYA3Q99504 573 aa28.21■■■□□ 2.11
SMARCD1-212ENST00000551966 VIL1P09327 827 aaKnown RBP28.2■■■□□ 2.1
SMARCD1-212ENST00000551966 KIF23Q02241 960 aaPredicted RBP28.2■■■□□ 2.1
SMARCD1-212ENST00000551966 SEC31BQ9NQW1 1179 aa28.2■■■□□ 2.1
SMARCD1-212ENST00000551966 HYPKQ9NX55 129 aa28.2■■■□□ 2.1
SMARCD1-212ENST00000551966 ASTN2O75129 1339 aaPredicted RBP28.19■■■□□ 2.1
SMARCD1-212ENST00000551966 DUSP27Q5VZP5 1158 aa28.19■■■□□ 2.1
SMARCD1-212ENST00000551966 PODXL2Q9NZ53 605 aa28.19■■■□□ 2.1
SMARCD1-212ENST00000551966 CCDC102AQ96A19 550 aa28.18■■■□□ 2.1
SMARCD1-212ENST00000551966 ZC3H12CQ9C0D7 883 aaKnown RBP28.18■■■□□ 2.1
SMARCD1-212ENST00000551966 ZNF157P51786 506 aaPredicted RBP28.17■■■□□ 2.1
SMARCD1-212ENST00000551966 KIF4BQ2VIQ3 1234 aa28.17■■■□□ 2.1
SMARCD1-212ENST00000551966 ZBTB38Q8NAP3 1195 aaPredicted RBP28.16■■■□□ 2.1
SMARCD1-212ENST00000551966 ADAMTS8Q9UP79 889 aa28.16■■■□□ 2.1
SMARCD1-212ENST00000551966 SCN9AQ15858 1988 aa28.16■■■□□ 2.1
SMARCD1-212ENST00000551966 PHAXQ9H814 394 aaKnown RBP28.15■■■□□ 2.1
SMARCD1-212ENST00000551966 MBIPQ9NS73 344 aa28.15■■■□□ 2.1
SMARCD1-212ENST00000551966 RNF186Q9NXI6 227 aa28.15■■■□□ 2.1
SMARCD1-212ENST00000551966 SAGE1Q9NXZ1 904 aa28.15■■■□□ 2.1
SMARCD1-212ENST00000551966 CSRNP1Q96S65 589 aa28.14■■■□□ 2.1
SMARCD1-212ENST00000551966 GGA3Q9NZ52 723 aa28.14■■■□□ 2.1
SMARCD1-212ENST00000551966 MYBBP1AQ9BQG0 1328 aaKnown RBP28.14■■■□□ 2.09
SMARCD1-212ENST00000551966 TRPA1O75762 1119 aa28.13■■■□□ 2.09
SMARCD1-212ENST00000551966 RIC3Q7Z5B4 369 aa28.13■■■□□ 2.09
SMARCD1-212ENST00000551966 UFL1O94874 794 aa28.12■■■□□ 2.09
SMARCD1-212ENST00000551966 SULF1Q8IWU6 871 aa28.12■■■□□ 2.09
SMARCD1-212ENST00000551966 JARID2Q92833 1246 aaPredicted RBP28.12■■■□□ 2.09
SMARCD1-212ENST00000551966 CDCA5Q96FF9 252 aa28.12■■■□□ 2.09
SMARCD1-212ENST00000551966 ANKIB1Q9P2G1 1089 aa28.12■■■□□ 2.09
SMARCD1-212ENST00000551966 SLC10A3P09131 477 aa28.11■■■□□ 2.09
SMARCD1-212ENST00000551966 ZNF853P0CG23 659 aa28.11■■■□□ 2.09
SMARCD1-212ENST00000551966 ZNF280AP59817 542 aaPredicted RBP28.11■■■□□ 2.09
SMARCD1-212ENST00000551966 SCARF1Q14162 830 aa28.11■■■□□ 2.09
SMARCD1-212ENST00000551966 GGA1Q9UJY5 639 aa28.11■■■□□ 2.09
SMARCD1-212ENST00000551966 MYD88Q99836 296 aa28.1■■■□□ 2.09
SMARCD1-212ENST00000551966 G3V3G9 751 aa28.09■■■□□ 2.09
SMARCD1-212ENST00000551966 WDR43Q15061 677 aaKnown RBP eCLIP28.09■■■□□ 2.09
SMARCD1-212ENST00000551966 DCAF8Q5TAQ9 597 aa28.09■■■□□ 2.09
SMARCD1-212ENST00000551966 ANGEL2Q5VTE6 544 aaKnown RBP28.09■■■□□ 2.09
SMARCD1-212ENST00000551966 RSBN1LQ6PCB5 846 aaPredicted RBP28.09■■■□□ 2.09
SMARCD1-212ENST00000551966 AGBL3Q8NEM8 1001 aa28.09■■■□□ 2.09
SMARCD1-212ENST00000551966 GMLQ99445 158 aa28.09■■■□□ 2.09
SMARCD1-212ENST00000551966 ELL2O00472 640 aaPredicted RBP28.08■■■□□ 2.09
SMARCD1-212ENST00000551966 PCCAP05165 728 aaPredicted RBP28.08■■■□□ 2.09
SMARCD1-212ENST00000551966 GOLGA2Q08379 1002 aa28.08■■■□□ 2.09
SMARCD1-212ENST00000551966 DDX10Q13206 875 aaKnown RBP28.08■■■□□ 2.09
SMARCD1-212ENST00000551966 CCDC85AQ96PX6 553 aaPredicted RBP28.08■■■□□ 2.09
SMARCD1-212ENST00000551966 WTIPA6NIX2 430 aaPredicted RBP28.07■■■□□ 2.08
SMARCD1-212ENST00000551966 PDE8AO60658 829 aa28.07■■■□□ 2.08
SMARCD1-212ENST00000551966 CCDC191Q8NCU4 936 aa28.07■■■□□ 2.08
SMARCD1-212ENST00000551966 CCDC152Q4G0S7 254 aa28.06■■■□□ 2.08
SMARCD1-212ENST00000551966 ZNF609O15014 1411 aa28.06■■■□□ 2.08
SMARCD1-212ENST00000551966 HSP90B1P14625 803 aaKnown RBP28.05■■■□□ 2.08
SMARCD1-212ENST00000551966 SCAF8Q9UPN6 1271 aaKnown RBP28.05■■■□□ 2.08
SMARCD1-212ENST00000551966 RASAL3Q86YV0 1011 aa28.04■■■□□ 2.08
SMARCD1-212ENST00000551966 MYOZ2Q9NPC6 264 aa28.04■■■□□ 2.08
SMARCD1-212ENST00000551966 USP17L8P0C7I0 530 aa28.03■■■□□ 2.08
SMARCD1-212ENST00000551966 MOB2Q70IA6 237 aa28.03■■■□□ 2.08
SMARCD1-212ENST00000551966 METTL22Q9BUU2 404 aaPredicted RBP28.03■■■□□ 2.08
SMARCD1-212ENST00000551966 CWC25Q9NXE8 425 aaPredicted RBP28.03■■■□□ 2.08
SMARCD1-212ENST00000551966 TNRC18O15417 2968 aaPredicted RBP28.02■■■□□ 2.08
SMARCD1-212ENST00000551966 AKAP11Q9UKA4 1901 aa28.02■■■□□ 2.08
SMARCD1-212ENST00000551966 XDHP47989 1333 aa28.02■■■□□ 2.08
SMARCD1-212ENST00000551966 SOX10P56693 466 aa28.02■■■□□ 2.08
SMARCD1-212ENST00000551966 ANKRD18AQ8IVF6 992 aa28.02■■■□□ 2.08
SMARCD1-212ENST00000551966 C8orf58Q8NAV2 365 aa28.02■■■□□ 2.08
SMARCD1-212ENST00000551966 USP17L3A6NCW0 530 aa28.01■■■□□ 2.07
SMARCD1-212ENST00000551966 USP17L4A6NCW7 530 aa28.01■■■□□ 2.07
SMARCD1-212ENST00000551966 USP17L1Q7RTZ2 530 aa28.01■■■□□ 2.07
SMARCD1-212ENST00000551966 PODNQ7Z5L7 613 aa28.01■■■□□ 2.07
SMARCD1-212ENST00000551966 IFT57Q9NWB7 429 aa28.01■■■□□ 2.07
SMARCD1-212ENST00000551966 ATP2B4P23634 1241 aa28■■■□□ 2.07
SMARCD1-212ENST00000551966 FKBP1BP68106 108 aa28■■■□□ 2.07
SMARCD1-212ENST00000551966 PRAMEF18Q5VWM3 479 aa28■■■□□ 2.07
SMARCD1-212ENST00000551966 REM2Q8IYK8 340 aaPredicted RBP28■■■□□ 2.07
SMARCD1-212ENST00000551966 PSME4Q14997 1843 aa27.99■■■□□ 2.07
SMARCD1-212ENST00000551966 PITPNM2Q9BZ72 1349 aa27.99■■■□□ 2.07
SMARCD1-212ENST00000551966 GNAI1P63096 354 aa27.99■■■□□ 2.07
SMARCD1-212ENST00000551966 APAF1O14727 1248 aa27.98■■■□□ 2.07
SMARCD1-212ENST00000551966 NBPF9Q3BBW0 867 aa27.98■■■□□ 2.07
SMARCD1-212ENST00000551966 CTU1Q7Z7A3 348 aaKnown RBP27.98■■■□□ 2.07
SMARCD1-212ENST00000551966 MXD3Q9BW11 206 aa27.98■■■□□ 2.07
SMARCD1-212ENST00000551966 UBE2Q2LH0YL09 131 aa27.97■■■□□ 2.07
SMARCD1-212ENST00000551966 MINPP1Q9UNW1 487 aa27.97■■■□□ 2.07
SMARCD1-212ENST00000551966 IGKV5-2P06315 115 aa27.96■■■□□ 2.07
SMARCD1-212ENST00000551966 TTLL11Q8NHH1 800 aa27.96■■■□□ 2.07
SMARCD1-212ENST00000551966 MAP3K2Q9Y2U5 619 aa27.96■■■□□ 2.07
SMARCD1-212ENST00000551966 DACT2Q5SW24 774 aa27.95■■■□□ 2.06
SMARCD1-212ENST00000551966 PAPPA2Q9BXP8 1791 aa27.94■■■□□ 2.06
SMARCD1-212ENST00000551966 CTSWP56202 376 aa27.94■■■□□ 2.06
SMARCD1-212ENST00000551966 TSPYL6Q8N831 410 aa27.94■■■□□ 2.06
SMARCD1-212ENST00000551966 BSDC1Q9NW68 430 aaPredicted RBP27.94■■■□□ 2.06
SMARCD1-212ENST00000551966 TBC1D8O95759 1140 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms