RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GPR25O00155 361 aa20.09■□□□□ 0.81
CACNB3-220ENST00000551716 ZNF280AP59817 542 aaPredicted RBP20.09■□□□□ 0.81
CACNB3-220ENST00000551716 GPSM2P81274 684 aa20.09■□□□□ 0.81
CACNB3-220ENST00000551716 HABP4Q5JVS0 413 aaKnown RBP20.09■□□□□ 0.81
CACNB3-220ENST00000551716 PITPNM2Q9BZ72 1349 aa20.08■□□□□ 0.81
CACNB3-220ENST00000551716 AIMP1Q12904 312 aaKnown RBP20.08■□□□□ 0.81
CACNB3-220ENST00000551716 ANGEL2Q5VTE6 544 aaKnown RBP20.08■□□□□ 0.81
CACNB3-220ENST00000551716 TBC1D16Q8TBP0 767 aa20.08■□□□□ 0.81
CACNB3-220ENST00000551716 ANKRD36CQ5JPF3 1778 aa20.08■□□□□ 0.8
CACNB3-220ENST00000551716 PROSER3Q2NL68 480 aa20.07■□□□□ 0.8
CACNB3-220ENST00000551716 XAGE3Q8WTP9 111 aa20.07■□□□□ 0.8
CACNB3-220ENST00000551716 CELF1Q92879 486 aaKnown RBP20.07■□□□□ 0.8
CACNB3-220ENST00000551716 KDM3BQ7LBC6 1761 aa20.07■□□□□ 0.8
CACNB3-220ENST00000551716 DUOX1Q9NRD9 1551 aa20.07■□□□□ 0.8
CACNB3-220ENST00000551716 FKTNO75072 461 aa20.06■□□□□ 0.8
CACNB3-220ENST00000551716 RPS8P62241 208 aaKnown RBP20.06■□□□□ 0.8
CACNB3-220ENST00000551716 SREBF2Q12772 1141 aa20.06■□□□□ 0.8
CACNB3-220ENST00000551716 INTS3Q68E01 1043 aaKnown RBP20.06■□□□□ 0.8
CACNB3-220ENST00000551716 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
CACNB3-220ENST00000551716 PLEKHF1Q96S99 279 aa20.06■□□□□ 0.8
CACNB3-220ENST00000551716 POLR2AP24928 1970 aaKnown RBP20.06■□□□□ 0.8
CACNB3-220ENST00000551716 ASTN2O75129 1339 aaPredicted RBP20.05■□□□□ 0.8
CACNB3-220ENST00000551716 ANXA1P04083 346 aa20.05■□□□□ 0.8
CACNB3-220ENST00000551716 USP17L8P0C7I0 530 aa20.05■□□□□ 0.8
CACNB3-220ENST00000551716 RSBN1LQ6PCB5 846 aaPredicted RBP20.05■□□□□ 0.8
CACNB3-220ENST00000551716 CFHR5Q9BXR6 569 aa20.05■□□□□ 0.8
CACNB3-220ENST00000551716 PODXL2Q9NZ53 605 aa20.05■□□□□ 0.8
CACNB3-220ENST00000551716 UBE2Q2LH0YL09 131 aa20.04■□□□□ 0.8
CACNB3-220ENST00000551716 HSP90B1P14625 803 aaKnown RBP20.04■□□□□ 0.8
CACNB3-220ENST00000551716 MYOZ2Q9NPC6 264 aa20.04■□□□□ 0.8
CACNB3-220ENST00000551716 MAPK8IP3Q9UPT6 1336 aa20.03■□□□□ 0.8
CACNB3-220ENST00000551716 ZNF609O15014 1411 aa20.03■□□□□ 0.8
CACNB3-220ENST00000551716 NF2P35240 595 aa20.03■□□□□ 0.8
CACNB3-220ENST00000551716 TTLL12Q14166 644 aaPredicted RBP20.03■□□□□ 0.8
CACNB3-220ENST00000551716 ANKIB1Q9P2G1 1089 aa20.03■□□□□ 0.8
CACNB3-220ENST00000551716 ALDH1A1P00352 501 aa20.02■□□□□ 0.8
CACNB3-220ENST00000551716 PLBD2Q8NHP8 589 aa20.02■□□□□ 0.8
CACNB3-220ENST00000551716 FAM89AQ96GI7 184 aa20.02■□□□□ 0.8
CACNB3-220ENST00000551716 GGA1Q9UJY5 639 aa20.02■□□□□ 0.8
CACNB3-220ENST00000551716 ANKRD13DQ6ZTN6 518 aa20.01■□□□□ 0.79
CACNB3-220ENST00000551716 LRRC37AA6NMS7 1700 aa20.01■□□□□ 0.79
CACNB3-220ENST00000551716 PAPPA2Q9BXP8 1791 aa20■□□□□ 0.79
CACNB3-220ENST00000551716 UFL1O94874 794 aa20■□□□□ 0.79
CACNB3-220ENST00000551716 INHBEP58166 350 aa20■□□□□ 0.79
CACNB3-220ENST00000551716 PODNQ7Z5L7 613 aa20■□□□□ 0.79
CACNB3-220ENST00000551716 GMLQ99445 158 aa20■□□□□ 0.79
CACNB3-220ENST00000551716 ISCA1Q9BUE6 129 aa20■□□□□ 0.79
CACNB3-220ENST00000551716 LAMB2P55268 1798 aa19.99■□□□□ 0.79
CACNB3-220ENST00000551716 MMP14P50281 582 aa19.99■□□□□ 0.79
CACNB3-220ENST00000551716 TRIM28Q13263 835 aaKnown RBP19.99■□□□□ 0.79
CACNB3-220ENST00000551716 MOB2Q70IA6 237 aa19.99■□□□□ 0.79
CACNB3-220ENST00000551716 USP17L3A6NCW0 530 aa19.98■□□□□ 0.79
CACNB3-220ENST00000551716 USP17L4A6NCW7 530 aa19.98■□□□□ 0.79
CACNB3-220ENST00000551716 IRS4O14654 1257 aaPredicted RBP19.98■□□□□ 0.79
CACNB3-220ENST00000551716 USP17L1Q7RTZ2 530 aa19.98■□□□□ 0.79
CACNB3-220ENST00000551716 ARMC9Q7Z3E5 817 aa19.98■□□□□ 0.79
CACNB3-220ENST00000551716 OGFOD1Q8N543 542 aa19.98■□□□□ 0.79
CACNB3-220ENST00000551716 LMOD3Q0VAK6 560 aa19.97■□□□□ 0.79
CACNB3-220ENST00000551716 RIPK4P57078 832 aa19.96■□□□□ 0.79
CACNB3-220ENST00000551716 ATP5J2-PTCD1G3V325 749 aa19.95■□□□□ 0.78
CACNB3-220ENST00000551716 TRIM17Q9Y577 477 aa19.95■□□□□ 0.78
CACNB3-220ENST00000551716 DDX60Q8IY21 1712 aaKnown RBP19.95■□□□□ 0.78
CACNB3-220ENST00000551716 MKRN3Q13064 507 aaKnown RBP19.94■□□□□ 0.78
CACNB3-220ENST00000551716 NBPF9Q3BBW0 867 aa19.94■□□□□ 0.78
CACNB3-220ENST00000551716 CCDC152Q4G0S7 254 aa19.94■□□□□ 0.78
CACNB3-220ENST00000551716 PRAMEF18Q5VWM3 479 aa19.94■□□□□ 0.78
CACNB3-220ENST00000551716 ZNF428Q96B54 188 aa19.94■□□□□ 0.78
CACNB3-220ENST00000551716 DBF4Q9UBU7 674 aaPredicted RBP19.94■□□□□ 0.78
CACNB3-220ENST00000551716 XDHP47989 1333 aa19.94■□□□□ 0.78
CACNB3-220ENST00000551716 TAF1P21675 1872 aa19.94■□□□□ 0.78
CACNB3-220ENST00000551716 MANSC4A6NHS7 340 aaPredicted RBP19.93■□□□□ 0.78
CACNB3-220ENST00000551716 ATP2B4P23634 1241 aa19.93■□□□□ 0.78
CACNB3-220ENST00000551716 PTPN12Q05209 780 aaKnown RBP19.93■□□□□ 0.78
CACNB3-220ENST00000551716 RTL5Q5HYW3 569 aaPredicted RBP19.93■□□□□ 0.78
CACNB3-220ENST00000551716 ZBTB38Q8NAP3 1195 aaPredicted RBP19.93■□□□□ 0.78
CACNB3-220ENST00000551716 HYPKQ9NX55 129 aa19.93■□□□□ 0.78
CACNB3-220ENST00000551716 CHPF2Q9P2E5 772 aa19.93■□□□□ 0.78
CACNB3-220ENST00000551716 DLG5Q8TDM6 1919 aa19.92■□□□□ 0.78
CACNB3-220ENST00000551716 HOXB7P09629 217 aa19.92■□□□□ 0.78
CACNB3-220ENST00000551716 FXR1P51114 621 aaKnown RBP eCLIP19.92■□□□□ 0.78
CACNB3-220ENST00000551716 LDLRAD1Q5T700 205 aa19.92■□□□□ 0.78
CACNB3-220ENST00000551716 SPRYD7Q5W111 196 aa19.92■□□□□ 0.78
CACNB3-220ENST00000551716 OTOP1Q7RTM1 612 aa19.92■□□□□ 0.78
CACNB3-220ENST00000551716 R3HDMLQ9H3Y0 253 aa19.92■□□□□ 0.78
CACNB3-220ENST00000551716 MYO3BQ8WXR4 1341 aa19.92■□□□□ 0.78
CACNB3-220ENST00000551716 POTEFA5A3E0 1075 aa19.91■□□□□ 0.78
CACNB3-220ENST00000551716 WNT10BO00744 389 aa19.91■□□□□ 0.78
CACNB3-220ENST00000551716 ERO1AQ96HE7 468 aa19.91■□□□□ 0.78
CACNB3-220ENST00000551716 SEC31BQ9NQW1 1179 aa19.91■□□□□ 0.78
CACNB3-220ENST00000551716 HDGFL1Q5TGJ6 251 aa19.9■□□□□ 0.78
CACNB3-220ENST00000551716 APOBEC3FQ8IUX4 373 aaKnown RBP19.9■□□□□ 0.78
CACNB3-220ENST00000551716 SLC10A4Q96EP9 437 aa19.9■□□□□ 0.78
CACNB3-220ENST00000551716 SCAF8Q9UPN6 1271 aaKnown RBP19.9■□□□□ 0.78
CACNB3-220ENST00000551716 UNCXA6NJT0 531 aa19.89■□□□□ 0.77
CACNB3-220ENST00000551716 CHL1O00533 1208 aa19.89■□□□□ 0.77
CACNB3-220ENST00000551716 SCN9AQ15858 1988 aa19.89■□□□□ 0.77
CACNB3-220ENST00000551716 OTUD7BQ6GQQ9 843 aa19.89■□□□□ 0.77
CACNB3-220ENST00000551716 IFNL1Q8IU54 200 aa19.89■□□□□ 0.77
CACNB3-220ENST00000551716 ANKRD18AQ8IVF6 992 aa19.89■□□□□ 0.77
CACNB3-220ENST00000551716 TMEM106CQ9BVX2 250 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms