RNA–Protein interactions for RNA: ENST00000551630.1

PTCH1-224, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-224ENST00000551630 FKBP4Q02790 459 aaKnown RBP eCLIP19.08■□□□□ 0.64
PTCH1-224ENST00000551630 PTPN12Q05209 780 aaKnown RBP19.08■□□□□ 0.64
PTCH1-224ENST00000551630 LRRC24Q50LG9 513 aa19.08■□□□□ 0.64
PTCH1-224ENST00000551630 LDHAL6AQ6ZMR3 332 aa19.08■□□□□ 0.64
PTCH1-224ENST00000551630 RTKN2Q8IZC4 609 aa19.08■□□□□ 0.64
PTCH1-224ENST00000551630 MPNDQ8N594 471 aa19.08■□□□□ 0.64
PTCH1-224ENST00000551630 CNNM1Q9NRU3 951 aa19.08■□□□□ 0.64
PTCH1-224ENST00000551630 NSFL1CQ9UNZ2 370 aaKnown RBP19.08■□□□□ 0.64
PTCH1-224ENST00000551630 PRELPP51888 382 aa19.07■□□□□ 0.64
PTCH1-224ENST00000551630 ATP8B2P98198 1209 aa19.07■□□□□ 0.64
PTCH1-224ENST00000551630 CHRNDQ07001 517 aa19.07■□□□□ 0.64
PTCH1-224ENST00000551630 DPP8Q6V1X1 898 aaPredicted RBP19.07■□□□□ 0.64
PTCH1-224ENST00000551630 SIL1Q9H173 461 aa19.07■□□□□ 0.64
PTCH1-224ENST00000551630 LTBP1Q14766 1721 aa19.07■□□□□ 0.64
PTCH1-224ENST00000551630 EXOC6Q8TAG9 804 aa19.06■□□□□ 0.64
PTCH1-224ENST00000551630 ZNF277Q9NRM2 450 aaPredicted RBP19.06■□□□□ 0.64
PTCH1-224ENST00000551630 ANKIB1Q9P2G1 1089 aa19.06■□□□□ 0.64
PTCH1-224ENST00000551630 A0A1B0GUL6 1792 aa19.06■□□□□ 0.64
PTCH1-224ENST00000551630 LTBP3Q9NS15 1303 aa19.05■□□□□ 0.64
PTCH1-224ENST00000551630 POLA2Q14181 598 aa19.05■□□□□ 0.64
PTCH1-224ENST00000551630 HELBQ8NG08 1087 aaPredicted RBP19.05■□□□□ 0.64
PTCH1-224ENST00000551630 GPR101Q96P66 508 aaPredicted RBP19.05■□□□□ 0.64
PTCH1-224ENST00000551630 PSMD1Q99460 953 aa19.05■□□□□ 0.64
PTCH1-224ENST00000551630 XDHP47989 1333 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 EYA2O00167 538 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 TAF5LO75529 589 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 UFL1O94874 794 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 GRIPAP1Q4V328 841 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 SSH3Q8TE77 659 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 COPRSQ9NQ92 184 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 POLLQ9UGP5 575 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 GGA1Q9UJY5 639 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 RIPOR2Q9Y4F9 1068 aa19.04■□□□□ 0.64
PTCH1-224ENST00000551630 WTIPA6NIX2 430 aaPredicted RBP19.03■□□□□ 0.64
PTCH1-224ENST00000551630 C6orf229H3BNL8 230 aa19.03■□□□□ 0.64
PTCH1-224ENST00000551630 SIRT2Q8IXJ6 389 aa19.03■□□□□ 0.64
PTCH1-224ENST00000551630 TBC1D16Q8TBP0 767 aa19.03■□□□□ 0.64
PTCH1-224ENST00000551630 RTFDC1Q9BY42 306 aaPredicted RBP19.03■□□□□ 0.64
PTCH1-224ENST00000551630 PODXL2Q9NZ53 605 aa19.03■□□□□ 0.64
PTCH1-224ENST00000551630 SNAP23O00161 211 aa19.02■□□□□ 0.64
PTCH1-224ENST00000551630 METTL24Q5JXM2 366 aa19.02■□□□□ 0.64
PTCH1-224ENST00000551630 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.64
PTCH1-224ENST00000551630 RPAP2Q8IXW5 612 aaPredicted RBP19.02■□□□□ 0.64
PTCH1-224ENST00000551630 ANKRD2Q9GZV1 360 aa19.02■□□□□ 0.64
PTCH1-224ENST00000551630 RNF181Q9P0P0 153 aa19.02■□□□□ 0.64
PTCH1-224ENST00000551630 MROH5Q6ZUA9 1318 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 CIAO1O76071 339 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 LMNB1P20700 586 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 ATP2B4P23634 1241 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 IARSP41252 1262 aaKnown RBP19.01■□□□□ 0.63
PTCH1-224ENST00000551630 AOC3Q16853 763 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 C9orf131Q5VYM1 1079 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 SUPT20HQ8NEM7 779 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 COL4A5P29400 1685 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 SBF1O95248 1867 aa19.01■□□□□ 0.63
PTCH1-224ENST00000551630 UTRNP46939 3433 aa19■□□□□ 0.63
PTCH1-224ENST00000551630 PPIP5K2O43314 1243 aa19■□□□□ 0.63
PTCH1-224ENST00000551630 KCNJ4P48050 445 aa19■□□□□ 0.63
PTCH1-224ENST00000551630 ZNF804BA4D1E1 1349 aa19■□□□□ 0.63
PTCH1-224ENST00000551630 CCDC88AQ3V6T2 1871 aa18.99■□□□□ 0.63
PTCH1-224ENST00000551630 RIMBP2O15034 1052 aa18.99■□□□□ 0.63
PTCH1-224ENST00000551630 HMMRO75330 724 aa18.99■□□□□ 0.63
PTCH1-224ENST00000551630 KLRK1P26718 216 aa18.99■□□□□ 0.63
PTCH1-224ENST00000551630 VGLL2Q8N8G2 317 aa18.99■□□□□ 0.63
PTCH1-224ENST00000551630 FBXO3Q9UK99 471 aa18.99■□□□□ 0.63
PTCH1-224ENST00000551630 TIAM2Q8IVF5 1701 aa18.98■□□□□ 0.63
PTCH1-224ENST00000551630 SURF6O75683 361 aaKnown RBP18.98■□□□□ 0.63
PTCH1-224ENST00000551630 IL15P40933 162 aaPredicted RBP18.98■□□□□ 0.63
PTCH1-224ENST00000551630 LARGE2Q8N3Y3 721 aa18.98■□□□□ 0.63
PTCH1-224ENST00000551630 EYA3Q99504 573 aa18.98■□□□□ 0.63
PTCH1-224ENST00000551630 EXOC6BQ9Y2D4 811 aa18.98■□□□□ 0.63
PTCH1-224ENST00000551630 LEMD3Q9Y2U8 911 aa18.98■□□□□ 0.63
PTCH1-224ENST00000551630 KIAA2012Q0VF49 1180 aa18.97■□□□□ 0.63
PTCH1-224ENST00000551630 G3BP1Q13283 466 aaKnown RBP eCLIP18.97■□□□□ 0.63
PTCH1-224ENST00000551630 OS9Q13438 667 aaPredicted RBP18.97■□□□□ 0.63
PTCH1-224ENST00000551630 WASHC4Q2M389 1173 aa18.97■□□□□ 0.63
PTCH1-224ENST00000551630 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.97■□□□□ 0.63
PTCH1-224ENST00000551630 MED23Q9ULK4 1368 aa18.96■□□□□ 0.63
PTCH1-224ENST00000551630 PDE8BO95263 885 aa18.96■□□□□ 0.63
PTCH1-224ENST00000551630 TFCP2Q12800 502 aa18.96■□□□□ 0.63
PTCH1-224ENST00000551630 TXNRD3Q86VQ6 643 aa18.96■□□□□ 0.63
PTCH1-224ENST00000551630 CEP126Q9P2H0 1117 aa18.96■□□□□ 0.63
PTCH1-224ENST00000551630 NOP58Q9Y2X3 529 aaKnown RBP18.96■□□□□ 0.63
PTCH1-224ENST00000551630 CHD4Q14839 1912 aa18.96■□□□□ 0.63
PTCH1-224ENST00000551630 DOK7Q18PE1 504 aa18.95■□□□□ 0.62
PTCH1-224ENST00000551630 NIM1KQ8IY84 436 aa18.95■□□□□ 0.62
PTCH1-224ENST00000551630 ZC3H12CQ9C0D7 883 aaKnown RBP18.95■□□□□ 0.62
PTCH1-224ENST00000551630 DBNDD1Q9H9R9 158 aa18.95■□□□□ 0.62
PTCH1-224ENST00000551630 IRS2Q9Y4H2 1338 aa18.95■□□□□ 0.62
PTCH1-224ENST00000551630 DICER1Q9UPY3 1922 aaKnown RBP18.94■□□□□ 0.62
PTCH1-224ENST00000551630 SASH1O94885 1247 aa18.94■□□□□ 0.62
PTCH1-224ENST00000551630 UBE4AQ14139 1066 aa18.94■□□□□ 0.62
PTCH1-224ENST00000551630 PUM3Q15397 648 aaKnown RBP18.94■□□□□ 0.62
PTCH1-224ENST00000551630 VPS33BQ9H267 617 aa18.94■□□□□ 0.62
PTCH1-224ENST00000551630 APBB1O00213 710 aa18.93■□□□□ 0.62
PTCH1-224ENST00000551630 FGFR2P21802 821 aa18.93■□□□□ 0.62
PTCH1-224ENST00000551630 AAMPQ13685 434 aa18.93■□□□□ 0.62
PTCH1-224ENST00000551630 ATP2B3Q16720 1220 aa18.93■□□□□ 0.62
PTCH1-224ENST00000551630 JDP2Q8WYK2 163 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms