RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 VEGFBP49765 207 aa29.58■■■□□ 2.33
TROAP-216ENST00000551567 CTSWP56202 376 aa29.58■■■□□ 2.33
TROAP-216ENST00000551567 FLIIQ13045 1269 aa29.58■■■□□ 2.33
TROAP-216ENST00000551567 ABT1Q9ULW3 272 aaKnown RBP29.58■■■□□ 2.33
TROAP-216ENST00000551567 EXOSC9Q06265 439 aaKnown RBP29.57■■■□□ 2.32
TROAP-216ENST00000551567 PODXL2Q9NZ53 605 aa29.57■■■□□ 2.32
TROAP-216ENST00000551567 ZBTB12Q9Y330 459 aaPredicted RBP29.57■■■□□ 2.32
TROAP-216ENST00000551567 SCN9AQ15858 1988 aa29.57■■■□□ 2.32
TROAP-216ENST00000551567 FKBP5Q13451 457 aaPredicted RBP29.56■■■□□ 2.32
TROAP-216ENST00000551567 ANKRD18AQ8IVF6 992 aa29.56■■■□□ 2.32
TROAP-216ENST00000551567 TRPM4Q8TD43 1214 aa29.56■■■□□ 2.32
TROAP-216ENST00000551567 CNOT7Q9UIV1 285 aaKnown RBP29.56■■■□□ 2.32
TROAP-216ENST00000551567 UBE3BQ7Z3V4 1068 aa29.55■■■□□ 2.32
TROAP-216ENST00000551567 MICALL2Q8IY33 904 aa29.55■■■□□ 2.32
TROAP-216ENST00000551567 KCNQ5Q9NR82 932 aa29.55■■■□□ 2.32
TROAP-216ENST00000551567 GGA1Q9UJY5 639 aa29.55■■■□□ 2.32
TROAP-216ENST00000551567 RTL9Q8NET4 1388 aa29.54■■■□□ 2.32
TROAP-216ENST00000551567 RASSF10A6NK89 507 aa29.54■■■□□ 2.32
TROAP-216ENST00000551567 DEFB115Q30KQ5 88 aa29.54■■■□□ 2.32
TROAP-216ENST00000551567 ZC3H12CQ9C0D7 883 aaKnown RBP29.54■■■□□ 2.32
TROAP-216ENST00000551567 SPINK5Q9NQ38 1064 aaPredicted RBP29.54■■■□□ 2.32
TROAP-216ENST00000551567 VAMP4O75379 141 aa29.53■■■□□ 2.32
TROAP-216ENST00000551567 HIRAP54198 1017 aaPredicted RBP29.53■■■□□ 2.32
TROAP-216ENST00000551567 TTLL11Q8NHH1 800 aa29.53■■■□□ 2.32
TROAP-216ENST00000551567 H7C1D1 291 aa29.52■■■□□ 2.32
TROAP-216ENST00000551567 CDC5LQ99459 802 aaKnown RBP29.52■■■□□ 2.32
TROAP-216ENST00000551567 GLIS2Q9BZE0 524 aaPredicted RBP29.52■■■□□ 2.32
TROAP-216ENST00000551567 GREM2Q9H772 168 aa29.52■■■□□ 2.32
TROAP-216ENST00000551567 XDHP47989 1333 aa29.51■■■□□ 2.32
TROAP-216ENST00000551567 G3V3G9 751 aa29.51■■■□□ 2.31
TROAP-216ENST00000551567 DCAF8Q5TAQ9 597 aa29.51■■■□□ 2.31
TROAP-216ENST00000551567 DNAAF4Q8WXU2 420 aa29.51■■■□□ 2.31
TROAP-216ENST00000551567 DPF2Q92785 391 aa29.51■■■□□ 2.31
TROAP-216ENST00000551567 PSME4Q14997 1843 aa29.5■■■□□ 2.31
TROAP-216ENST00000551567 H7C1W4 665 aa29.5■■■□□ 2.31
TROAP-216ENST00000551567 GCKRQ14397 625 aa29.5■■■□□ 2.31
TROAP-216ENST00000551567 CST9Q5W186 159 aa29.5■■■□□ 2.31
TROAP-216ENST00000551567 SAMD7Q7Z3H4 446 aa29.49■■■□□ 2.31
TROAP-216ENST00000551567 PGAP2Q9UHJ9 254 aa29.49■■■□□ 2.31
TROAP-216ENST00000551567 PAXIP1Q6ZW49 1069 aaPredicted RBP29.48■■■□□ 2.31
TROAP-216ENST00000551567 ZC3H15Q8WU90 426 aaKnown RBP29.48■■■□□ 2.31
TROAP-216ENST00000551567 MYH16Q9H6N6 1097 aa29.48■■■□□ 2.31
TROAP-216ENST00000551567 RPS12P25398 132 aaKnown RBP29.47■■■□□ 2.31
TROAP-216ENST00000551567 TBC1D10BQ4KMP7 808 aaPredicted RBP29.47■■■□□ 2.31
TROAP-216ENST00000551567 WDR33Q9C0J8 1336 aaKnown RBP29.46■■■□□ 2.31
TROAP-216ENST00000551567 FOXN1O15353 648 aa29.46■■■□□ 2.31
TROAP-216ENST00000551567 EGFRP00533 1210 aa29.46■■■□□ 2.31
TROAP-216ENST00000551567 TNS4Q8IZW8 715 aa29.46■■■□□ 2.31
TROAP-216ENST00000551567 LINS1Q8NG48 757 aa29.46■■■□□ 2.31
TROAP-216ENST00000551567 CELF2O95319 508 aaKnown RBP29.45■■■□□ 2.31
TROAP-216ENST00000551567 ATP2B4P23634 1241 aa29.45■■■□□ 2.31
TROAP-216ENST00000551567 BSDC1Q9NW68 430 aaPredicted RBP29.45■■■□□ 2.31
TROAP-216ENST00000551567 THSD7BQ9C0I4 1608 aa29.45■■■□□ 2.3
TROAP-216ENST00000551567 WTIPA6NIX2 430 aaPredicted RBP29.44■■■□□ 2.3
TROAP-216ENST00000551567 F6X3S4 739 aa29.44■■■□□ 2.3
TROAP-216ENST00000551567 CASP7P55210 303 aa29.44■■■□□ 2.3
TROAP-216ENST00000551567 GRM1Q13255 1194 aa29.44■■■□□ 2.3
TROAP-216ENST00000551567 RBM26Q5T8P6 1007 aaKnown RBP29.44■■■□□ 2.3
TROAP-216ENST00000551567 AIDAQ96BJ3 306 aa29.44■■■□□ 2.3
TROAP-216ENST00000551567 ZNF408Q9H9D4 720 aa29.44■■■□□ 2.3
TROAP-216ENST00000551567 MINPP1Q9UNW1 487 aa29.44■■■□□ 2.3
TROAP-216ENST00000551567 TLL2Q9Y6L7 1015 aa29.44■■■□□ 2.3
TROAP-216ENST00000551567 POLR2AP24928 1970 aaKnown RBP29.43■■■□□ 2.3
TROAP-216ENST00000551567 VIL1P09327 827 aaKnown RBP29.43■■■□□ 2.3
TROAP-216ENST00000551567 FAM161AQ3B820 660 aa29.43■■■□□ 2.3
TROAP-216ENST00000551567 CDC37L1Q7L3B6 337 aa29.43■■■□□ 2.3
TROAP-216ENST00000551567 CAPNS2Q96L46 248 aa29.43■■■□□ 2.3
TROAP-216ENST00000551567 PLA2G12BQ9BX93 195 aa29.43■■■□□ 2.3
TROAP-216ENST00000551567 CYP4F22Q6NT55 531 aa29.42■■■□□ 2.3
TROAP-216ENST00000551567 ITGA6P23229 1130 aa29.41■■■□□ 2.3
TROAP-216ENST00000551567 IGHMBP2P38935 993 aaKnown RBP29.41■■■□□ 2.3
TROAP-216ENST00000551567 USP48Q86UV5 1035 aa29.41■■■□□ 2.3
TROAP-216ENST00000551567 WBP1LQ9NX94 342 aa29.41■■■□□ 2.3
TROAP-216ENST00000551567 MED23Q9ULK4 1368 aa29.4■■■□□ 2.3
TROAP-216ENST00000551567 DLK2Q6UY11 383 aa29.4■■■□□ 2.3
TROAP-216ENST00000551567 CCT4P50991 539 aaKnown RBP29.39■■■□□ 2.3
TROAP-216ENST00000551567 KIF4BQ2VIQ3 1234 aa29.39■■■□□ 2.3
TROAP-216ENST00000551567 ECE1P42892 770 aa29.38■■■□□ 2.29
TROAP-216ENST00000551567 BEND3Q5T5X7 828 aa29.38■■■□□ 2.29
TROAP-216ENST00000551567 RSBN1LQ6PCB5 846 aaPredicted RBP29.38■■■□□ 2.29
TROAP-216ENST00000551567 SAPCD2Q86UD0 394 aa29.38■■■□□ 2.29
TROAP-216ENST00000551567 ZNF646O15015 1829 aaPredicted RBP29.38■■■□□ 2.29
TROAP-216ENST00000551567 ZNF609O15014 1411 aa29.37■■■□□ 2.29
TROAP-216ENST00000551567 CSF1RP07333 972 aa29.37■■■□□ 2.29
TROAP-216ENST00000551567 CTCFP49711 727 aaPredicted RBP29.37■■■□□ 2.29
TROAP-216ENST00000551567 KRT26Q7Z3Y9 468 aa29.37■■■□□ 2.29
TROAP-216ENST00000551567 PODNQ7Z5L7 613 aa29.36■■■□□ 2.29
TROAP-216ENST00000551567 AGBL3Q8NEM8 1001 aa29.36■■■□□ 2.29
TROAP-216ENST00000551567 MPHOSPH8Q99549 860 aa29.36■■■□□ 2.29
TROAP-216ENST00000551567 ZNF521Q96K83 1311 aa29.36■■■□□ 2.29
TROAP-216ENST00000551567 A0A1B0GUL6 1792 aa29.36■■■□□ 2.29
TROAP-216ENST00000551567 USP17L3A6NCW0 530 aa29.35■■■□□ 2.29
TROAP-216ENST00000551567 USP17L4A6NCW7 530 aa29.35■■■□□ 2.29
TROAP-216ENST00000551567 ADM5C9JUS6 153 aa29.35■■■□□ 2.29
TROAP-216ENST00000551567 MAP2K1Q02750 393 aaPredicted RBP29.35■■■□□ 2.29
TROAP-216ENST00000551567 USP17L1Q7RTZ2 530 aa29.35■■■□□ 2.29
TROAP-216ENST00000551567 DCPSQ96C86 337 aaKnown RBP29.35■■■□□ 2.29
TROAP-216ENST00000551567 CAPN15O75808 1086 aa29.34■■■□□ 2.29
TROAP-216ENST00000551567 GGA3Q9NZ52 723 aa29.34■■■□□ 2.29
TROAP-216ENST00000551567 ASTN2O75129 1339 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms