RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 PDE4AP27815 886 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 TNNI3KQ59H18 835 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 STYK1Q6J9G0 422 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 AACSQ86V21 672 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 CCDC24Q8N4L8 307 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 PUS3Q9BZE2 481 aaKnown RBP12.76□□□□□ -0.37
NEK3-203ENST00000551355 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
NEK3-203ENST00000551355 FPGT-TNNI3KV9GXZ4 949 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 TTC41PQ6P2S7 1318 aa12.76□□□□□ -0.37
NEK3-203ENST00000551355 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
NEK3-203ENST00000551355 PDE1AP54750 535 aa12.75□□□□□ -0.37
NEK3-203ENST00000551355 PUM3Q15397 648 aaKnown RBP12.75□□□□□ -0.37
NEK3-203ENST00000551355 CELF1Q92879 486 aaKnown RBP12.75□□□□□ -0.37
NEK3-203ENST00000551355 TMX4Q9H1E5 349 aaPredicted RBP12.75□□□□□ -0.37
NEK3-203ENST00000551355 MYH3P11055 1940 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 LRP5O75197 1615 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 SALL3Q9BXA9 1300 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 CHRNDQ07001 517 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 BMP2KLQ5H9B9 411 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 C16orf71Q8IYS4 520 aaPredicted RBP12.74□□□□□ -0.37
NEK3-203ENST00000551355 VGLL2Q8N8G2 317 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 LPIN2Q92539 896 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 EAF2Q96CJ1 260 aaPredicted RBP12.74□□□□□ -0.37
NEK3-203ENST00000551355 ECHDC1Q9NTX5 307 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 MINPP1Q9UNW1 487 aa12.74□□□□□ -0.37
NEK3-203ENST00000551355 C10orf71Q711Q0 1435 aa12.73□□□□□ -0.37
NEK3-203ENST00000551355 A0A1B0GUL7 405 aa12.73□□□□□ -0.37
NEK3-203ENST00000551355 GLRX3O76003 335 aaKnown RBP12.73□□□□□ -0.37
NEK3-203ENST00000551355 IFIT1P09914 478 aaKnown RBP12.73□□□□□ -0.37
NEK3-203ENST00000551355 SLC5A1P13866 664 aa12.73□□□□□ -0.37
NEK3-203ENST00000551355 TGFB2P61812 414 aa12.73□□□□□ -0.37
NEK3-203ENST00000551355 UBE4AQ14139 1066 aa12.73□□□□□ -0.37
NEK3-203ENST00000551355 ATP2B3Q16720 1220 aa12.73□□□□□ -0.37
NEK3-203ENST00000551355 EIF5BO60841 1220 aaKnown RBP12.72□□□□□ -0.37
NEK3-203ENST00000551355 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
NEK3-203ENST00000551355 CCDC158Q5M9N0 1113 aa12.72□□□□□ -0.37
NEK3-203ENST00000551355 GORABQ5T7V8 394 aa12.72□□□□□ -0.37
NEK3-203ENST00000551355 SP8Q8IXZ3 490 aa12.72□□□□□ -0.37
NEK3-203ENST00000551355 NEUROD6Q96NK8 337 aa12.72□□□□□ -0.37
NEK3-203ENST00000551355 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
NEK3-203ENST00000551355 CD2APQ9Y5K6 639 aa12.72□□□□□ -0.37
NEK3-203ENST00000551355 ZNF609O15014 1411 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 CASZ1Q86V15 1759 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 PSDA5PKW4 1024 aaPredicted RBP12.71□□□□□ -0.37
NEK3-203ENST00000551355 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
NEK3-203ENST00000551355 ATP5JP18859 108 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 FGFR2P21802 821 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 TTC22Q5TAA0 569 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 OTUD7AQ8TE49 926 aaPredicted RBP12.71□□□□□ -0.37
NEK3-203ENST00000551355 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.71□□□□□ -0.37
NEK3-203ENST00000551355 CCDC8Q9H0W5 538 aaPredicted RBP12.71□□□□□ -0.37
NEK3-203ENST00000551355 BCL11AQ9H165 835 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 SPON1Q9HCB6 807 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 DBNLQ9UJU6 430 aaKnown RBP12.71□□□□□ -0.37
NEK3-203ENST00000551355 LEMD3Q9Y2U8 911 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 ATP6V0A2Q9Y487 856 aa12.71□□□□□ -0.37
NEK3-203ENST00000551355 TNRC6CQ9HCJ0 1690 aaKnown RBP12.7□□□□□ -0.38
NEK3-203ENST00000551355 XDHP47989 1333 aa12.7□□□□□ -0.38
NEK3-203ENST00000551355 KCNJ4P48050 445 aa12.7□□□□□ -0.38
NEK3-203ENST00000551355 TIMM10P62072 90 aa12.7□□□□□ -0.38
NEK3-203ENST00000551355 TICAM2Q86XR7 235 aa12.7□□□□□ -0.38
NEK3-203ENST00000551355 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.38
NEK3-203ENST00000551355 XAGE2Q96GT9 111 aa12.7□□□□□ -0.38
NEK3-203ENST00000551355 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
NEK3-203ENST00000551355 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
NEK3-203ENST00000551355 PODXL2Q9NZ53 605 aa12.7□□□□□ -0.38
NEK3-203ENST00000551355 ANKIB1Q9P2G1 1089 aa12.7□□□□□ -0.38
NEK3-203ENST00000551355 ZBTB22O15209 634 aa12.69□□□□□ -0.38
NEK3-203ENST00000551355 UQCRFS1P1P0C7P4 283 aa12.69□□□□□ -0.38
NEK3-203ENST00000551355 ATP2B4P23634 1241 aa12.69□□□□□ -0.38
NEK3-203ENST00000551355 CAVIN4Q5BKX8 364 aa12.69□□□□□ -0.38
NEK3-203ENST00000551355 SKAP1Q86WV1 359 aa12.69□□□□□ -0.38
NEK3-203ENST00000551355 PI4K2BQ8TCG2 481 aa12.69□□□□□ -0.38
NEK3-203ENST00000551355 DBNDD2Q9BQY9 259 aa12.69□□□□□ -0.38
NEK3-203ENST00000551355 GNL3LQ9NVN8 582 aaKnown RBP12.69□□□□□ -0.38
NEK3-203ENST00000551355 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.69□□□□□ -0.38
NEK3-203ENST00000551355 TAF5LO75529 589 aa12.68□□□□□ -0.38
NEK3-203ENST00000551355 PTGER2P43116 358 aa12.68□□□□□ -0.38
NEK3-203ENST00000551355 TTC39AQ5SRH9 613 aa12.68□□□□□ -0.38
NEK3-203ENST00000551355 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
NEK3-203ENST00000551355 CASC1Q6TDU7 716 aa12.68□□□□□ -0.38
NEK3-203ENST00000551355 C15orf52Q6ZUT6 534 aaKnown RBP12.68□□□□□ -0.38
NEK3-203ENST00000551355 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
NEK3-203ENST00000551355 TTLL6Q8N841 843 aa12.68□□□□□ -0.38
NEK3-203ENST00000551355 HELBQ8NG08 1087 aaPredicted RBP12.68□□□□□ -0.38
NEK3-203ENST00000551355 GGA1Q9UJY5 639 aa12.68□□□□□ -0.38
NEK3-203ENST00000551355 ZNF804BA4D1E1 1349 aa12.67□□□□□ -0.38
NEK3-203ENST00000551355 PRPF40BQ6NWY9 871 aaKnown RBP12.67□□□□□ -0.38
NEK3-203ENST00000551355 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
NEK3-203ENST00000551355 TLR7Q9NYK1 1049 aaKnown RBP12.67□□□□□ -0.38
NEK3-203ENST00000551355 NSFL1CQ9UNZ2 370 aaKnown RBP12.67□□□□□ -0.38
NEK3-203ENST00000551355 SEMA3EO15041 775 aa12.66□□□□□ -0.38
NEK3-203ENST00000551355 GSPT1P15170 499 aaKnown RBP12.66□□□□□ -0.38
NEK3-203ENST00000551355 CHRNA5P30532 468 aa12.66□□□□□ -0.38
NEK3-203ENST00000551355 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
NEK3-203ENST00000551355 LRRFIP1Q32MZ4 808 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms