RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 ZNF397Q8NF99 534 aaPredicted RBP17.62■□□□□ 0.41
PDE1B-207ENST00000550620 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 KCND1Q9NSA2 647 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 MORC2Q9Y6X9 1032 aaPredicted RBP17.62■□□□□ 0.41
PDE1B-207ENST00000550620 SCRN1Q12765 414 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 TAF3Q5VWG9 929 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 CEP57L1Q8IYX8 460 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 CHMP4CQ96CF2 233 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 PHF8Q9UPP1 1060 aa17.62■□□□□ 0.41
PDE1B-207ENST00000550620 CCDC69A6NI79 296 aa17.61■□□□□ 0.41
PDE1B-207ENST00000550620 AIMP1Q12904 312 aaKnown RBP17.61■□□□□ 0.41
PDE1B-207ENST00000550620 MCMDC2Q4G0Z9 681 aa17.61■□□□□ 0.41
PDE1B-207ENST00000550620 ADD1P35611 737 aaKnown RBP17.6■□□□□ 0.41
PDE1B-207ENST00000550620 CEBPZQ03701 1054 aaKnown RBP17.6■□□□□ 0.41
PDE1B-207ENST00000550620 FAM160A1Q05DH4 1040 aa17.6■□□□□ 0.41
PDE1B-207ENST00000550620 ZNF771Q7L3S4 317 aaPredicted RBP17.6■□□□□ 0.41
PDE1B-207ENST00000550620 KIF18AQ8NI77 898 aa17.6■□□□□ 0.41
PDE1B-207ENST00000550620 ERO1AQ96HE7 468 aa17.6■□□□□ 0.41
PDE1B-207ENST00000550620 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
PDE1B-207ENST00000550620 IGKV5-2P06315 115 aa17.6■□□□□ 0.41
PDE1B-207ENST00000550620 CYP21A2P08686 494 aa17.6■□□□□ 0.41
PDE1B-207ENST00000550620 NSUN7Q8NE18 718 aaKnown RBP17.6■□□□□ 0.41
PDE1B-207ENST00000550620 DHX8Q14562 1220 aaKnown RBP17.59■□□□□ 0.41
PDE1B-207ENST00000550620 TNNI3KQ59H18 835 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 DHX40Q8IX18 779 aaKnown RBP17.59■□□□□ 0.41
PDE1B-207ENST00000550620 THEMISQ8N1K5 641 aaPredicted RBP17.59■□□□□ 0.41
PDE1B-207ENST00000550620 LRRC59Q96AG4 307 aaKnown RBP17.59■□□□□ 0.41
PDE1B-207ENST00000550620 EDC3Q96F86 508 aaKnown RBP17.59■□□□□ 0.41
PDE1B-207ENST00000550620 IMPACTQ9P2X3 320 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 FPGT-TNNI3KV9GXZ4 949 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 COL15A1P39059 1388 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 NEURL1BA8MQ27 555 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 KCNA6P17658 529 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 CCZ1BP86790 482 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 CCZ1P86791 482 aaPredicted RBP17.59■□□□□ 0.41
PDE1B-207ENST00000550620 SNW1Q13573 536 aaKnown RBP17.59■□□□□ 0.41
PDE1B-207ENST00000550620 DHX32Q7L7V1 743 aaKnown RBP17.59■□□□□ 0.41
PDE1B-207ENST00000550620 FILIP1Q7Z7B0 1213 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 KLHDC4Q8TBB5 520 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 GOLPH3LQ9H4A5 285 aa17.59■□□□□ 0.41
PDE1B-207ENST00000550620 DBNLQ9UJU6 430 aaKnown RBP17.59■□□□□ 0.41
PDE1B-207ENST00000550620 PXDNQ92626 1479 aa17.58■□□□□ 0.41
PDE1B-207ENST00000550620 ZNF609O15014 1411 aa17.58■□□□□ 0.41
PDE1B-207ENST00000550620 PTPDC1A2A3K4 754 aa17.58■□□□□ 0.4
PDE1B-207ENST00000550620 PRAMEF22A3QJZ6 481 aa17.58■□□□□ 0.4
PDE1B-207ENST00000550620 GCKRQ14397 625 aa17.58■□□□□ 0.4
PDE1B-207ENST00000550620 SLFNL1Q499Z3 407 aa17.58■□□□□ 0.4
PDE1B-207ENST00000550620 CCAR2Q8N163 923 aaKnown RBP17.58■□□□□ 0.4
PDE1B-207ENST00000550620 KRT222Q8N1A0 295 aa17.58■□□□□ 0.4
PDE1B-207ENST00000550620 USP16Q9Y5T5 823 aa17.58■□□□□ 0.4
PDE1B-207ENST00000550620 USP27XA6NNY8 438 aa17.57■□□□□ 0.4
PDE1B-207ENST00000550620 NAA30Q147X3 362 aaPredicted RBP17.57■□□□□ 0.4
PDE1B-207ENST00000550620 ENGASEQ8NFI3 743 aa17.57■□□□□ 0.4
PDE1B-207ENST00000550620 ZNF215Q9UL58 517 aaPredicted RBP17.57■□□□□ 0.4
PDE1B-207ENST00000550620 SLU7O95391 586 aaKnown RBP17.57■□□□□ 0.4
PDE1B-207ENST00000550620 ARID5BQ14865 1188 aa17.57■□□□□ 0.4
PDE1B-207ENST00000550620 PDIA6Q15084 440 aa17.57■□□□□ 0.4
PDE1B-207ENST00000550620 FSIP1Q8NA03 581 aa17.57■□□□□ 0.4
PDE1B-207ENST00000550620 USP28Q96RU2 1077 aa17.57■□□□□ 0.4
PDE1B-207ENST00000550620 DNAJC2Q99543 621 aaKnown RBP17.57■□□□□ 0.4
PDE1B-207ENST00000550620 HAUS7Q99871 368 aa17.57■□□□□ 0.4
PDE1B-207ENST00000550620 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
PDE1B-207ENST00000550620 PHRF1Q9P1Y6 1649 aaKnown RBP17.57■□□□□ 0.4
PDE1B-207ENST00000550620 ME1P48163 572 aa17.56■□□□□ 0.4
PDE1B-207ENST00000550620 ZRSR1Q15695 479 aaKnown RBP17.56■□□□□ 0.4
PDE1B-207ENST00000550620 LMTK3Q96Q04 1460 aa17.56■□□□□ 0.4
PDE1B-207ENST00000550620 NRDCO43847 1150 aa17.56■□□□□ 0.4
PDE1B-207ENST00000550620 CEBPAP49715 358 aaPredicted RBP17.56■□□□□ 0.4
PDE1B-207ENST00000550620 CCDC129Q6ZRS4 1044 aa17.56■□□□□ 0.4
PDE1B-207ENST00000550620 AOPEPQ8N6M6 819 aa17.56■□□□□ 0.4
PDE1B-207ENST00000550620 CCDC150Q8NCX0 1101 aa17.56■□□□□ 0.4
PDE1B-207ENST00000550620 METTL22Q9BUU2 404 aaPredicted RBP17.56■□□□□ 0.4
PDE1B-207ENST00000550620 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
PDE1B-207ENST00000550620 TUBB4AP04350 444 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 TFCP2Q12800 502 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 TICAM2Q86XR7 235 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 MRPS27Q92552 414 aaKnown RBP17.55■□□□□ 0.4
PDE1B-207ENST00000550620 MYD88Q99836 296 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 LRRC2Q9BYS8 371 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 AGXT2Q9BYV1 514 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 TPM4P67936 248 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 KMT5BQ4FZB7 885 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 EPHA10Q5JZY3 1008 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 KBTBD3Q8NAB2 608 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 DSCC1Q9BVC3 393 aa17.55■□□□□ 0.4
PDE1B-207ENST00000550620 FTOQ9C0B1 505 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDE1B-207ENST00000550620 TRMT1Q9NXH9 659 aaKnown RBP17.55■□□□□ 0.4
PDE1B-207ENST00000550620 CTDNEP1O95476 244 aa17.54■□□□□ 0.4
PDE1B-207ENST00000550620 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
PDE1B-207ENST00000550620 SEC62Q99442 399 aaKnown RBP17.54■□□□□ 0.4
PDE1B-207ENST00000550620 BPIFA3Q9BQP9 254 aa17.54■□□□□ 0.4
PDE1B-207ENST00000550620 HELLSQ9NRZ9 838 aa17.54■□□□□ 0.4
PDE1B-207ENST00000550620 A0A1W2PQ27 194 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 A0A1W2PQ64 194 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 A0A1W2PQD8 194 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 RFX5P48382 616 aaPredicted RBP17.53■□□□□ 0.4
PDE1B-207ENST00000550620 FOSBP53539 338 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 PSME1Q06323 249 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 APOBRQ0VD83 1088 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 STOX1Q6ZVD7 989 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms