RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 TMC4Q7Z404 712 aa19.64■□□□□ 0.73
SVOP-203ENST00000550436 GBA2Q9HCG7 927 aaPredicted RBP19.64■□□□□ 0.73
SVOP-203ENST00000550436 ZNF316A6NFI3 1004 aaPredicted RBP19.63■□□□□ 0.73
SVOP-203ENST00000550436 TBC1D16Q8TBP0 767 aa19.63■□□□□ 0.73
SVOP-203ENST00000550436 SEC31BQ9NQW1 1179 aa19.63■□□□□ 0.73
SVOP-203ENST00000550436 LMOD3Q0VAK6 560 aa19.62■□□□□ 0.73
SVOP-203ENST00000550436 JARID2Q92833 1246 aaPredicted RBP19.62■□□□□ 0.73
SVOP-203ENST00000550436 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
SVOP-203ENST00000550436 IRS4O14654 1257 aaPredicted RBP19.61■□□□□ 0.73
SVOP-203ENST00000550436 DCPSQ96C86 337 aaKnown RBP19.61■□□□□ 0.73
SVOP-203ENST00000550436 TRPA1O75762 1119 aa19.6■□□□□ 0.73
SVOP-203ENST00000550436 ZNF157P51786 506 aaPredicted RBP19.6■□□□□ 0.73
SVOP-203ENST00000550436 RPS8P62241 208 aaKnown RBP19.6■□□□□ 0.73
SVOP-203ENST00000550436 KIF4BQ2VIQ3 1234 aa19.6■□□□□ 0.73
SVOP-203ENST00000550436 C2orf69Q8N8R5 385 aa19.6■□□□□ 0.73
SVOP-203ENST00000550436 RNF186Q9NXI6 227 aa19.6■□□□□ 0.73
SVOP-203ENST00000550436 GGA3Q9NZ52 723 aa19.6■□□□□ 0.73
SVOP-203ENST00000550436 AKAP11Q9UKA4 1901 aa19.6■□□□□ 0.73
SVOP-203ENST00000550436 CCDC85AQ96PX6 553 aaPredicted RBP19.59■□□□□ 0.73
SVOP-203ENST00000550436 SCAF8Q9UPN6 1271 aaKnown RBP19.59■□□□□ 0.73
SVOP-203ENST00000550436 TNRC18O15417 2968 aaPredicted RBP19.59■□□□□ 0.73
SVOP-203ENST00000550436 VIL1P09327 827 aaKnown RBP19.58■□□□□ 0.72
SVOP-203ENST00000550436 RPS12P25398 132 aaKnown RBP19.58■□□□□ 0.72
SVOP-203ENST00000550436 SOX10P56693 466 aa19.58■□□□□ 0.72
SVOP-203ENST00000550436 DUSP27Q5VZP5 1158 aa19.58■□□□□ 0.72
SVOP-203ENST00000550436 CDCA5Q96FF9 252 aa19.58■□□□□ 0.72
SVOP-203ENST00000550436 CSRNP1Q96S65 589 aa19.58■□□□□ 0.72
SVOP-203ENST00000550436 EYA3Q99504 573 aa19.58■□□□□ 0.72
SVOP-203ENST00000550436 PHAXQ9H814 394 aaKnown RBP19.58■□□□□ 0.72
SVOP-203ENST00000550436 PRKRIP1Q9H875 184 aaPredicted RBP19.58■□□□□ 0.72
SVOP-203ENST00000550436 DBF4Q9UBU7 674 aaPredicted RBP19.58■□□□□ 0.72
SVOP-203ENST00000550436 WTIPA6NIX2 430 aaPredicted RBP19.57■□□□□ 0.72
SVOP-203ENST00000550436 UFL1O94874 794 aa19.57■□□□□ 0.72
SVOP-203ENST00000550436 ZC3H12CQ9C0D7 883 aaKnown RBP19.57■□□□□ 0.72
SVOP-203ENST00000550436 SLC10A3P09131 477 aa19.56■□□□□ 0.72
SVOP-203ENST00000550436 TRIM28Q13263 835 aaKnown RBP19.56■□□□□ 0.72
SVOP-203ENST00000550436 MOB2Q70IA6 237 aa19.56■□□□□ 0.72
SVOP-203ENST00000550436 CCDC102AQ96A19 550 aa19.56■□□□□ 0.72
SVOP-203ENST00000550436 ELL2O00472 640 aaPredicted RBP19.55■□□□□ 0.72
SVOP-203ENST00000550436 SCARF1Q14162 830 aa19.55■□□□□ 0.72
SVOP-203ENST00000550436 ANGEL2Q5VTE6 544 aaKnown RBP19.55■□□□□ 0.72
SVOP-203ENST00000550436 SULF1Q8IWU6 871 aa19.55■□□□□ 0.72
SVOP-203ENST00000550436 RUNDC1Q96C34 613 aa19.55■□□□□ 0.72
SVOP-203ENST00000550436 MBIPQ9NS73 344 aa19.55■□□□□ 0.72
SVOP-203ENST00000550436 HYPKQ9NX55 129 aa19.55■□□□□ 0.72
SVOP-203ENST00000550436 PODXL2Q9NZ53 605 aa19.55■□□□□ 0.72
SVOP-203ENST00000550436 RIC3Q7Z5B4 369 aa19.54■□□□□ 0.72
SVOP-203ENST00000550436 MYD88Q99836 296 aa19.54■□□□□ 0.72
SVOP-203ENST00000550436 ANKIB1Q9P2G1 1089 aa19.54■□□□□ 0.72
SVOP-203ENST00000550436 ADAMTS8Q9UP79 889 aa19.54■□□□□ 0.72
SVOP-203ENST00000550436 PSME4Q14997 1843 aa19.53■□□□□ 0.72
SVOP-203ENST00000550436 HOXB7P09629 217 aa19.53■□□□□ 0.72
SVOP-203ENST00000550436 ZNF280AP59817 542 aaPredicted RBP19.53■□□□□ 0.72
SVOP-203ENST00000550436 PRAMEF18Q5VWM3 479 aa19.53■□□□□ 0.72
SVOP-203ENST00000550436 RASAL3Q86YV0 1011 aa19.53■□□□□ 0.72
SVOP-203ENST00000550436 ZBTB38Q8NAP3 1195 aaPredicted RBP19.53■□□□□ 0.72
SVOP-203ENST00000550436 SAGE1Q9NXZ1 904 aa19.53■□□□□ 0.72
SVOP-203ENST00000550436 GGA1Q9UJY5 639 aa19.53■□□□□ 0.72
SVOP-203ENST00000550436 G3V3G9 751 aa19.52■□□□□ 0.72
SVOP-203ENST00000550436 DCAF8Q5TAQ9 597 aa19.52■□□□□ 0.72
SVOP-203ENST00000550436 RSBN1LQ6PCB5 846 aaPredicted RBP19.52■□□□□ 0.72
SVOP-203ENST00000550436 GMLQ99445 158 aa19.52■□□□□ 0.72
SVOP-203ENST00000550436 MXD3Q9BW11 206 aa19.52■□□□□ 0.72
SVOP-203ENST00000550436 SPEF2Q9C093 1822 aa19.49■□□□□ 0.71
SVOP-203ENST00000550436 UBE2Q2LH0YL09 131 aa19.49■□□□□ 0.71
SVOP-203ENST00000550436 PCCAP05165 728 aaPredicted RBP19.49■□□□□ 0.71
SVOP-203ENST00000550436 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
SVOP-203ENST00000550436 GOLGA2Q08379 1002 aa19.49■□□□□ 0.71
SVOP-203ENST00000550436 WDR43Q15061 677 aaKnown RBP eCLIP19.49■□□□□ 0.71
SVOP-203ENST00000550436 AGBL3Q8NEM8 1001 aa19.49■□□□□ 0.71
SVOP-203ENST00000550436 PDE8AO60658 829 aa19.48■□□□□ 0.71
SVOP-203ENST00000550436 USP17L8P0C7I0 530 aa19.48■□□□□ 0.71
SVOP-203ENST00000550436 C8orf58Q8NAV2 365 aa19.48■□□□□ 0.71
SVOP-203ENST00000550436 MYOZ2Q9NPC6 264 aa19.48■□□□□ 0.71
SVOP-203ENST00000550436 NBPF9Q3BBW0 867 aa19.47■□□□□ 0.71
SVOP-203ENST00000550436 CCDC152Q4G0S7 254 aa19.47■□□□□ 0.71
SVOP-203ENST00000550436 CTU1Q7Z7A3 348 aaKnown RBP19.47■□□□□ 0.71
SVOP-203ENST00000550436 PAPPA2Q9BXP8 1791 aa19.47■□□□□ 0.71
SVOP-203ENST00000550436 ZNF646O15015 1829 aaPredicted RBP19.46■□□□□ 0.71
SVOP-203ENST00000550436 ZNF609O15014 1411 aa19.46■□□□□ 0.71
SVOP-203ENST00000550436 TBC1D8O95759 1140 aa19.46■□□□□ 0.71
SVOP-203ENST00000550436 CCDC191Q8NCU4 936 aa19.46■□□□□ 0.71
SVOP-203ENST00000550436 CWC25Q9NXE8 425 aaPredicted RBP19.46■□□□□ 0.71
SVOP-203ENST00000550436 XDHP47989 1333 aa19.46■□□□□ 0.71
SVOP-203ENST00000550436 USP17L3A6NCW0 530 aa19.45■□□□□ 0.7
SVOP-203ENST00000550436 USP17L4A6NCW7 530 aa19.45■□□□□ 0.7
SVOP-203ENST00000550436 MKRN3Q13064 507 aaKnown RBP19.45■□□□□ 0.7
SVOP-203ENST00000550436 USP17L1Q7RTZ2 530 aa19.45■□□□□ 0.7
SVOP-203ENST00000550436 ANKRD18AQ8IVF6 992 aa19.45■□□□□ 0.7
SVOP-203ENST00000550436 METTL22Q9BUU2 404 aaPredicted RBP19.45■□□□□ 0.7
SVOP-203ENST00000550436 APAF1O14727 1248 aa19.44■□□□□ 0.7
SVOP-203ENST00000550436 ATP2B4P23634 1241 aa19.44■□□□□ 0.7
SVOP-203ENST00000550436 TXNRD3Q86VQ6 643 aa19.44■□□□□ 0.7
SVOP-203ENST00000550436 HPS5Q9UPZ3 1129 aa19.44■□□□□ 0.7
SVOP-203ENST00000550436 IGKV5-2P06315 115 aa19.43■□□□□ 0.7
SVOP-203ENST00000550436 TSPYL6Q8N831 410 aa19.43■□□□□ 0.7
SVOP-203ENST00000550436 ZNF296Q8WUU4 475 aaPredicted RBP19.43■□□□□ 0.7
SVOP-203ENST00000550436 MAP3K2Q9Y2U5 619 aa19.43■□□□□ 0.7
SVOP-203ENST00000550436 FKBP1BP68106 108 aa19.42■□□□□ 0.7
SVOP-203ENST00000550436 CCDC184Q52MB2 194 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms