RNA–Protein interactions for RNA: ENST00000550314.5

VDR-207, Transcript of vitamin D receptor, humanhuman

TSL 3

Gene VDR, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-207ENST00000550314 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
VDR-207ENST00000550314 RFX5P48382 616 aaPredicted RBP16.67■□□□□ 0.26
VDR-207ENST00000550314 GPSM2P81274 684 aa16.67■□□□□ 0.26
VDR-207ENST00000550314 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
VDR-207ENST00000550314 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
VDR-207ENST00000550314 EYA3Q99504 573 aa16.67■□□□□ 0.26
VDR-207ENST00000550314 VPS33BQ9H267 617 aa16.67■□□□□ 0.26
VDR-207ENST00000550314 COPRSQ9NQ92 184 aa16.67■□□□□ 0.26
VDR-207ENST00000550314 PODXL2Q9NZ53 605 aa16.67■□□□□ 0.26
VDR-207ENST00000550314 GGA1Q9UJY5 639 aa16.67■□□□□ 0.26
VDR-207ENST00000550314 MROH5Q6ZUA9 1318 aa16.67■□□□□ 0.26
VDR-207ENST00000550314 EYA2O00167 538 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 NFKBIEO00221 500 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 LMNB1P20700 586 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 KCNJ4P48050 445 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 CHRNDQ07001 517 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 CACNA1SQ13698 1873 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 KLHDC4Q8TBB5 520 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 RTFDC1Q9BY42 306 aaPredicted RBP16.66■□□□□ 0.26
VDR-207ENST00000550314 LEMD3Q9Y2U8 911 aa16.66■□□□□ 0.26
VDR-207ENST00000550314 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
VDR-207ENST00000550314 CIAO1O76071 339 aa16.65■□□□□ 0.26
VDR-207ENST00000550314 UFL1O94874 794 aa16.65■□□□□ 0.26
VDR-207ENST00000550314 IL15P40933 162 aaPredicted RBP16.65■□□□□ 0.26
VDR-207ENST00000550314 RASSF7Q02833 373 aa16.65■□□□□ 0.26
VDR-207ENST00000550314 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.26
VDR-207ENST00000550314 SIL1Q9H173 461 aa16.65■□□□□ 0.26
VDR-207ENST00000550314 RIPOR2Q9Y4F9 1068 aa16.65■□□□□ 0.26
VDR-207ENST00000550314 POLA2Q14181 598 aa16.64■□□□□ 0.25
VDR-207ENST00000550314 TBC1D16Q8TBP0 767 aa16.64■□□□□ 0.25
VDR-207ENST00000550314 PUS3Q9BZE2 481 aaKnown RBP16.64■□□□□ 0.25
VDR-207ENST00000550314 ZC3H12CQ9C0D7 883 aaKnown RBP16.64■□□□□ 0.25
VDR-207ENST00000550314 ZNF277Q9NRM2 450 aaPredicted RBP16.64■□□□□ 0.25
VDR-207ENST00000550314 TAF1P21675 1872 aa16.64■□□□□ 0.25
VDR-207ENST00000550314 G3V3G9 751 aa16.63■□□□□ 0.25
VDR-207ENST00000550314 PPIP5K2O43314 1243 aa16.63■□□□□ 0.25
VDR-207ENST00000550314 SURF6O75683 361 aaKnown RBP16.63■□□□□ 0.25
VDR-207ENST00000550314 IARSP41252 1262 aaKnown RBP16.63■□□□□ 0.25
VDR-207ENST00000550314 OS9Q13438 667 aaPredicted RBP16.63■□□□□ 0.25
VDR-207ENST00000550314 WASHC4Q2M389 1173 aa16.63■□□□□ 0.25
VDR-207ENST00000550314 LRRC24Q50LG9 513 aa16.63■□□□□ 0.25
VDR-207ENST00000550314 HSP90AB4PQ58FF6 505 aa16.63■□□□□ 0.25
VDR-207ENST00000550314 DCAF8Q5TAQ9 597 aa16.63■□□□□ 0.25
VDR-207ENST00000550314 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
VDR-207ENST00000550314 RNF181Q9P0P0 153 aa16.63■□□□□ 0.25
VDR-207ENST00000550314 CEP126Q9P2H0 1117 aa16.63■□□□□ 0.25
VDR-207ENST00000550314 PA2G4Q9UQ80 394 aaKnown RBP16.63■□□□□ 0.25
VDR-207ENST00000550314 C9orf131Q5VYM1 1079 aa16.62■□□□□ 0.25
VDR-207ENST00000550314 SLC51AQ86UW1 340 aa16.62■□□□□ 0.25
VDR-207ENST00000550314 LARGE2Q8N3Y3 721 aa16.62■□□□□ 0.25
VDR-207ENST00000550314 HELBQ8NG08 1087 aaPredicted RBP16.62■□□□□ 0.25
VDR-207ENST00000550314 POLLQ9UGP5 575 aa16.62■□□□□ 0.25
VDR-207ENST00000550314 ZNF804BA4D1E1 1349 aa16.62■□□□□ 0.25
VDR-207ENST00000550314 SNED1Q8TER0 1413 aa16.62■□□□□ 0.25
VDR-207ENST00000550314 TAF5LO75529 589 aa16.61■□□□□ 0.25
VDR-207ENST00000550314 PDE8BO95263 885 aa16.61■□□□□ 0.25
VDR-207ENST00000550314 NEFLP07196 543 aa16.61■□□□□ 0.25
VDR-207ENST00000550314 UBE4AQ14139 1066 aa16.61■□□□□ 0.25
VDR-207ENST00000550314 EXOC6Q8TAG9 804 aa16.61■□□□□ 0.25
VDR-207ENST00000550314 COL4A1P02462 1669 aa16.61■□□□□ 0.25
VDR-207ENST00000550314 LRRC37AA6NMS7 1700 aa16.61■□□□□ 0.25
VDR-207ENST00000550314 RIMBP2O15034 1052 aa16.6■□□□□ 0.25
VDR-207ENST00000550314 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
VDR-207ENST00000550314 KIAA2012Q0VF49 1180 aa16.6■□□□□ 0.25
VDR-207ENST00000550314 AOC3Q16853 763 aa16.6■□□□□ 0.25
VDR-207ENST00000550314 ATG9AQ7Z3C6 839 aa16.6■□□□□ 0.25
VDR-207ENST00000550314 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
VDR-207ENST00000550314 NIM1KQ8IY84 436 aa16.6■□□□□ 0.25
VDR-207ENST00000550314 NOP58Q9Y2X3 529 aaKnown RBP16.6■□□□□ 0.25
VDR-207ENST00000550314 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
VDR-207ENST00000550314 PUM3Q15397 648 aaKnown RBP16.59■□□□□ 0.25
VDR-207ENST00000550314 AKAP2Q9Y2D5 859 aa16.59■□□□□ 0.25
VDR-207ENST00000550314 ZC3H4Q9UPT8 1303 aaKnown RBP16.59■□□□□ 0.25
VDR-207ENST00000550314 IFIT1P09914 478 aaKnown RBP16.58■□□□□ 0.24
VDR-207ENST00000550314 MED23Q9ULK4 1368 aa16.58■□□□□ 0.24
VDR-207ENST00000550314 SPEF2Q9C093 1822 aa16.58■□□□□ 0.24
VDR-207ENST00000550314 SLC5A1P13866 664 aa16.57■□□□□ 0.24
VDR-207ENST00000550314 SIRT2Q8IXJ6 389 aa16.57■□□□□ 0.24
VDR-207ENST00000550314 LPIN2Q92539 896 aa16.57■□□□□ 0.24
VDR-207ENST00000550314 PCDHB15Q9Y5E8 787 aa16.57■□□□□ 0.24
VDR-207ENST00000550314 RAB11FIP3O75154 756 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 PRELPP51888 382 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 EIF6P56537 245 aaKnown RBP16.56■□□□□ 0.24
VDR-207ENST00000550314 TFCP2Q12800 502 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 ATP2B3Q16720 1220 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 CAVIN4Q5BKX8 364 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 C15orf52Q6ZUT6 534 aaKnown RBP16.56■□□□□ 0.24
VDR-207ENST00000550314 ZNF804AQ7Z570 1209 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 VPS37DQ86XT2 251 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 GPR101Q96P66 508 aaPredicted RBP16.56■□□□□ 0.24
VDR-207ENST00000550314 ZNRF3Q9ULT6 936 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 EXOC6BQ9Y2D4 811 aa16.56■□□□□ 0.24
VDR-207ENST00000550314 GOLGB1Q14789 3259 aaKnown RBP16.56■□□□□ 0.24
VDR-207ENST00000550314 DPY19L2Q6NUT2 758 aa16.55■□□□□ 0.24
VDR-207ENST00000550314 COA1Q9GZY4 146 aa16.55■□□□□ 0.24
VDR-207ENST00000550314 RWDD1Q9H446 243 aaPredicted RBP16.55■□□□□ 0.24
VDR-207ENST00000550314 SNAP23O00161 211 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms