RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 IRS4O14654 1257 aaPredicted RBP16.36■□□□□ 0.21
LETMD1-222ENST00000550274 DPF2Q92785 391 aa16.36■□□□□ 0.21
LETMD1-222ENST00000550274 KCNQ5Q9NR82 932 aa16.36■□□□□ 0.21
LETMD1-222ENST00000550274 ECE2O60344 883 aa16.35■□□□□ 0.21
LETMD1-222ENST00000550274 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
LETMD1-222ENST00000550274 TRIM28Q13263 835 aaKnown RBP16.35■□□□□ 0.21
LETMD1-222ENST00000550274 DOK7Q18PE1 504 aa16.35■□□□□ 0.21
LETMD1-222ENST00000550274 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-222ENST00000550274 USP48Q86UV5 1035 aa16.35■□□□□ 0.21
LETMD1-222ENST00000550274 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
LETMD1-222ENST00000550274 TBC1D16Q8TBP0 767 aa16.34■□□□□ 0.21
LETMD1-222ENST00000550274 ZIC5Q96T25 663 aa16.34■□□□□ 0.21
LETMD1-222ENST00000550274 PHAXQ9H814 394 aaKnown RBP16.34■□□□□ 0.21
LETMD1-222ENST00000550274 TNRC18O15417 2968 aaPredicted RBP16.33■□□□□ 0.21
LETMD1-222ENST00000550274 BRPF1P55201 1214 aaPredicted RBP16.33■□□□□ 0.2
LETMD1-222ENST00000550274 RPS8P62241 208 aaKnown RBP16.33■□□□□ 0.2
LETMD1-222ENST00000550274 RIC3Q7Z5B4 369 aa16.33■□□□□ 0.2
LETMD1-222ENST00000550274 SEC31BQ9NQW1 1179 aa16.33■□□□□ 0.2
LETMD1-222ENST00000550274 HUNKP57058 714 aa16.32■□□□□ 0.2
LETMD1-222ENST00000550274 GOLGA2Q08379 1002 aa16.32■□□□□ 0.2
LETMD1-222ENST00000550274 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
LETMD1-222ENST00000550274 KRT26Q7Z3Y9 468 aa16.32■□□□□ 0.2
LETMD1-222ENST00000550274 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
LETMD1-222ENST00000550274 EYA3Q99504 573 aa16.32■□□□□ 0.2
LETMD1-222ENST00000550274 ADM5C9JUS6 153 aa16.31■□□□□ 0.2
LETMD1-222ENST00000550274 ELL2O00472 640 aaPredicted RBP16.31■□□□□ 0.2
LETMD1-222ENST00000550274 CA12O43570 354 aa16.31■□□□□ 0.2
LETMD1-222ENST00000550274 RPS12P25398 132 aaKnown RBP16.31■□□□□ 0.2
LETMD1-222ENST00000550274 FAM161AQ3B820 660 aa16.31■□□□□ 0.2
LETMD1-222ENST00000550274 JARID2Q92833 1246 aaPredicted RBP16.31■□□□□ 0.2
LETMD1-222ENST00000550274 MYD88Q99836 296 aa16.31■□□□□ 0.2
LETMD1-222ENST00000550274 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
LETMD1-222ENST00000550274 ASTN2O75129 1339 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-222ENST00000550274 CCDC85CA6NKD9 419 aa16.3■□□□□ 0.2
LETMD1-222ENST00000550274 APAF1O14727 1248 aa16.3■□□□□ 0.2
LETMD1-222ENST00000550274 UFL1O94874 794 aa16.3■□□□□ 0.2
LETMD1-222ENST00000550274 PODXL2Q9NZ53 605 aa16.3■□□□□ 0.2
LETMD1-222ENST00000550274 VIL1P09327 827 aaKnown RBP16.29■□□□□ 0.2
LETMD1-222ENST00000550274 NOGQ13253 232 aa16.29■□□□□ 0.2
LETMD1-222ENST00000550274 KIF4BQ2VIQ3 1234 aa16.29■□□□□ 0.2
LETMD1-222ENST00000550274 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
LETMD1-222ENST00000550274 CCDC85AQ96PX6 553 aaPredicted RBP16.29■□□□□ 0.2
LETMD1-222ENST00000550274 ZC3H12CQ9C0D7 883 aaKnown RBP16.29■□□□□ 0.2
LETMD1-222ENST00000550274 PRKRIP1Q9H875 184 aaPredicted RBP16.29■□□□□ 0.2
LETMD1-222ENST00000550274 GBA2Q9HCG7 927 aaPredicted RBP16.29■□□□□ 0.2
LETMD1-222ENST00000550274 ZNF609O15014 1411 aa16.28■□□□□ 0.2
LETMD1-222ENST00000550274 FAM155AB1AL88 458 aaPredicted RBP16.28■□□□□ 0.2
LETMD1-222ENST00000550274 PCCAP05165 728 aaPredicted RBP16.28■□□□□ 0.2
LETMD1-222ENST00000550274 GNAI1P63096 354 aa16.28■□□□□ 0.2
LETMD1-222ENST00000550274 CCDC191Q8NCU4 936 aa16.28■□□□□ 0.2
LETMD1-222ENST00000550274 DCPSQ96C86 337 aaKnown RBP16.28■□□□□ 0.2
LETMD1-222ENST00000550274 MCOLN1Q9GZU1 580 aa16.28■□□□□ 0.2
LETMD1-222ENST00000550274 GGA3Q9NZ52 723 aa16.28■□□□□ 0.2
LETMD1-222ENST00000550274 ANKIB1Q9P2G1 1089 aa16.28■□□□□ 0.2
LETMD1-222ENST00000550274 CACNA1FO60840 1977 aa16.27■□□□□ 0.2
LETMD1-222ENST00000550274 PDE8AO60658 829 aa16.27■□□□□ 0.2
LETMD1-222ENST00000550274 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.2
LETMD1-222ENST00000550274 RGMBQ6NW40 437 aa16.27■□□□□ 0.2
LETMD1-222ENST00000550274 CWC25Q9NXE8 425 aaPredicted RBP16.27■□□□□ 0.2
LETMD1-222ENST00000550274 GGA1Q9UJY5 639 aa16.27■□□□□ 0.2
LETMD1-222ENST00000550274 A0A1B0GUL6 1792 aa16.26■□□□□ 0.19
LETMD1-222ENST00000550274 PAPPA2Q9BXP8 1791 aa16.26■□□□□ 0.19
LETMD1-222ENST00000550274 C2orf69Q8N8R5 385 aa16.26■□□□□ 0.19
LETMD1-222ENST00000550274 METTL22Q9BUU2 404 aaPredicted RBP16.26■□□□□ 0.19
LETMD1-222ENST00000550274 G3V3G9 751 aa16.25■□□□□ 0.19
LETMD1-222ENST00000550274 HSP90B1P14625 803 aaKnown RBP16.25■□□□□ 0.19
LETMD1-222ENST00000550274 ZNF280AP59817 542 aaPredicted RBP16.25■□□□□ 0.19
LETMD1-222ENST00000550274 CALD1Q05682 793 aaKnown RBP16.25■□□□□ 0.19
LETMD1-222ENST00000550274 DCAF8Q5TAQ9 597 aa16.25■□□□□ 0.19
LETMD1-222ENST00000550274 RSBN1LQ6PCB5 846 aaPredicted RBP16.25■□□□□ 0.19
LETMD1-222ENST00000550274 SULF1Q8IWU6 871 aa16.25■□□□□ 0.19
LETMD1-222ENST00000550274 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
LETMD1-222ENST00000550274 PDE4DIPQ5VU43 2346 aa16.25■□□□□ 0.19
LETMD1-222ENST00000550274 XDHP47989 1333 aa16.24■□□□□ 0.19
LETMD1-222ENST00000550274 WTIPA6NIX2 430 aaPredicted RBP16.24■□□□□ 0.19
LETMD1-222ENST00000550274 RGS19P49795 217 aa16.24■□□□□ 0.19
LETMD1-222ENST00000550274 KIF23Q02241 960 aaPredicted RBP16.24■□□□□ 0.19
LETMD1-222ENST00000550274 DGKZQ13574 1117 aa16.24■□□□□ 0.19
LETMD1-222ENST00000550274 ANKRD18AQ8IVF6 992 aa16.24■□□□□ 0.19
LETMD1-222ENST00000550274 CDCA5Q96FF9 252 aa16.24■□□□□ 0.19
LETMD1-222ENST00000550274 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
LETMD1-222ENST00000550274 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
LETMD1-222ENST00000550274 ZNF157P51786 506 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-222ENST00000550274 ANGEL2Q5VTE6 544 aaKnown RBP16.23■□□□□ 0.19
LETMD1-222ENST00000550274 CCDC30Q5VVM6 783 aa16.23■□□□□ 0.19
LETMD1-222ENST00000550274 AGBL3Q8NEM8 1001 aa16.23■□□□□ 0.19
LETMD1-222ENST00000550274 CCDC102AQ96A19 550 aa16.23■□□□□ 0.19
LETMD1-222ENST00000550274 GMLQ99445 158 aa16.23■□□□□ 0.19
LETMD1-222ENST00000550274 DDX58O95786 925 aaKnown RBP16.22■□□□□ 0.19
LETMD1-222ENST00000550274 SLC10A3P09131 477 aa16.22■□□□□ 0.19
LETMD1-222ENST00000550274 CTSWP56202 376 aa16.22■□□□□ 0.19
LETMD1-222ENST00000550274 MLLT1Q03111 559 aaPredicted RBP16.22■□□□□ 0.19
LETMD1-222ENST00000550274 SCARF1Q14162 830 aa16.22■□□□□ 0.19
LETMD1-222ENST00000550274 ECM29Q5VYK3 1845 aa16.22■□□□□ 0.19
LETMD1-222ENST00000550274 PI4KAP2A4QPH2 592 aa16.21■□□□□ 0.19
LETMD1-222ENST00000550274 ATP2B4P23634 1241 aa16.21■□□□□ 0.19
LETMD1-222ENST00000550274 PI4KAP1Q8N8J0 262 aa16.21■□□□□ 0.19
LETMD1-222ENST00000550274 TTLL11Q8NHH1 800 aa16.21■□□□□ 0.19
LETMD1-222ENST00000550274 TSR2Q969E8 191 aaKnown RBP16.21■□□□□ 0.19
LETMD1-222ENST00000550274 MYOZ2Q9NPC6 264 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms